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Results for Kdm5a

Gene Name Gene ID Reads Annotation
Kdm5a ENSMUSG00000030180 3925 lysine (K)-specific demethylase 5A [Source:MGI Symbol;Acc:MGI:2136980]







Genes with expression patterns similar to Kdm5a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Kdm5a ENSMUSG00000030180 3925 6 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 5A [Source:MGI Symbol;Acc:MGI:2136980]
2. Nfib ENSMUSG00000008575 7869 1.529 0.807 0.722 - - - - nuclear factor I/B [Source:MGI Symbol;Acc:MGI:103188]
3. Mpp5 ENSMUSG00000021112 3361 1.505 - - 0.747 - - 0.758 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) [Source:MGI Symbol;Acc:MGI:1927339]
4. Pkib ENSMUSG00000019876 677 1.443 0.740 - - - - 0.703 protein kinase inhibitor beta, cAMP dependent, testis specific [Source:MGI Symbol;Acc:MGI:101937]
5. Axin1 ENSMUSG00000024182 1680 0.888 0.888 - - - - - axin 1 [Source:MGI Symbol;Acc:MGI:1096327]
6. Clpp ENSMUSG00000002660 1310 0.866 0.866 - - - - - caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:MGI Symbol;Acc:MGI:1858213]
7. Tdg ENSMUSG00000034674 2033 0.865 0.865 - - - - - thymine DNA glycosylase [Source:MGI Symbol;Acc:MGI:108247]
8. Dlg1 ENSMUSG00000022770 4833 0.858 0.858 - - - - - discs large MAGUK scaffold protein 1 [Source:MGI Symbol;Acc:MGI:107231]
9. Copb2 ENSMUSG00000032458 4148 0.851 0.851 - - - - - coatomer protein complex, subunit beta 2 (beta prime) [Source:MGI Symbol;Acc:MGI:1354962]
10. Samd4b ENSMUSG00000109336 3606 0.837 0.837 - - - - - sterile alpha motif domain containing 4B [Source:MGI Symbol;Acc:MGI:2448542]
11. Gm11964 ENSMUSG00000081021 513 0.834 0.834 - - - - - predicted gene 11964 [Source:MGI Symbol;Acc:MGI:3652241]
12. Zfp825 ENSMUSG00000069208 1108 0.831 0.831 - - - - - zinc finger protein 825 [Source:MGI Symbol;Acc:MGI:2385315]
13. Sh3rf1 ENSMUSG00000031642 1692 0.828 0.828 - - - - - SH3 domain containing ring finger 1 [Source:MGI Symbol;Acc:MGI:1913066]
14. Trub1 ENSMUSG00000025086 1396 0.816 0.816 - - - - - TruB pseudouridine (psi) synthase family member 1 [Source:MGI Symbol;Acc:MGI:1919383]
15. Sfr1 ENSMUSG00000025066 7102 0.811 0.811 - - - - - SWI5 dependent recombination repair 1 [Source:MGI Symbol;Acc:MGI:1915038]
16. Itfg2 ENSMUSG00000001518 1233 0.805 0.805 - - - - - integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
17. Mrpl18 ENSMUSG00000057388 6091 0.804 0.804 - - - - - mitochondrial ribosomal protein L18 [Source:MGI Symbol;Acc:MGI:1914931]
18. Ppp2r5c ENSMUSG00000017843 2470 0.803 0.803 - - - - - protein phosphatase 2, regulatory subunit B', gamma [Source:MGI Symbol;Acc:MGI:1349475]
19. Myo1b ENSMUSG00000018417 2574 0.802 0.802 - - - - - myosin IB [Source:MGI Symbol;Acc:MGI:107752]
20. Tgs1 ENSMUSG00000028233 8585 0.802 0.802 - - - - - trimethylguanosine synthase 1 [Source:MGI Symbol;Acc:MGI:2151797]
21. Ubxn8 ENSMUSG00000052906 461 0.801 0.801 - - - - - UBX domain protein 8 [Source:MGI Symbol;Acc:MGI:1337129]
22. Trio ENSMUSG00000022263 2813 0.8 0.800 - - - - - triple functional domain (PTPRF interacting) [Source:MGI Symbol;Acc:MGI:1927230]
23. Dbn1 ENSMUSG00000034675 8203 0.798 0.798 - - - - - drebrin 1 [Source:MGI Symbol;Acc:MGI:1931838]
24. Pebp1 ENSMUSG00000032959 17476 0.796 0.796 - - - - - phosphatidylethanolamine binding protein 1 [Source:MGI Symbol;Acc:MGI:1344408]
25. Fam115a Fam115a 5095 0.794 0.794 - - - - -
26. BC005537 ENSMUSG00000019132 3886 0.789 0.789 - - - - - cDNA sequence BC005537 [Source:MGI Symbol;Acc:MGI:2441726]
27. Sh3bp4 ENSMUSG00000036206 1738 0.789 - - - - - 0.789 SH3-domain binding protein 4 [Source:MGI Symbol;Acc:MGI:2138297]
28. Arxes1 ENSMUSG00000048355 2222 0.783 0.783 - - - - - adipocyte-related X-chromosome expressed sequence 1 [Source:MGI Symbol;Acc:MGI:1923469]
29. Ndufa10 ENSMUSG00000026260 4523 0.78 0.780 - - - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:MGI Symbol;Acc:MGI:1914523]
30. Gm12355 ENSMUSG00000078134 4798 0.776 0.776 - - - - - predicted gene 12355 [Source:MGI Symbol;Acc:MGI:3649769]
31. Rpl14-ps1 ENSMUSG00000046721 14062 0.774 0.774 - - - - - ribosomal protein L14, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3710579]
32. Eif1 ENSMUSG00000035530 14469 0.774 0.774 - - - - - eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125]
33. Arid2 ENSMUSG00000033237 5679 0.773 - 0.773 - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:MGI Symbol;Acc:MGI:1924294]
34. Mettl5 ENSMUSG00000051730 624 0.77 - - - - - 0.770 methyltransferase like 5 [Source:MGI Symbol;Acc:MGI:1922672]
35. Mau2 ENSMUSG00000031858 1748 0.765 - 0.765 - - - - MAU2 sister chromatid cohesion factor [Source:MGI Symbol;Acc:MGI:1921799]
36. Pafah1b1 ENSMUSG00000020745 6863 0.765 0.765 - - - - - platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 [Source:MGI Symbol;Acc:MGI:109520]
37. Cox14 ENSMUSG00000023020 2075 0.757 - 0.757 - - - - cytochrome c oxidase assembly protein 14 [Source:MGI Symbol;Acc:MGI:1913629]
38. Camsap1 ENSMUSG00000026933 2938 0.755 - 0.755 - - - - calmodulin regulated spectrin-associated protein 1 [Source:MGI Symbol;Acc:MGI:3036242]
39. Gm6542 ENSMUSG00000085172 966 0.752 0.752 - - - - - predicted gene 6542 [Source:MGI Symbol;Acc:MGI:3644649]
40. Sltm ENSMUSG00000032212 5014 0.752 0.752 - - - - - SAFB-like, transcription modulator [Source:MGI Symbol;Acc:MGI:1913910]
41. Heatr1 ENSMUSG00000050244 3121 0.751 - - - - - 0.751 HEAT repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442524]
42. Dusp11 ENSMUSG00000030002 1522 0.751 - - - - - 0.751 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:MGI Symbol;Acc:MGI:1919352]
43. Lyrm5 571 0.75 0.750 - - - - - LYR motif containing 5, transcript variant X4
44. Ncor1 ENSMUSG00000018501 10839 0.749 0.749 - - - - - nuclear receptor co-repressor 1 [Source:MGI Symbol;Acc:MGI:1349717]
45. Fam129b ENSMUSG00000026796 3211 0.748 0.748 - - - - - family with sequence similarity 129, member B [Source:MGI Symbol;Acc:MGI:2442910]
46. Ndufa4 ENSMUSG00000029632 15838 0.747 0.747 - - - - - Ndufa4, mitochondrial complex associated [Source:MGI Symbol;Acc:MGI:107686]
47. 2310044G17Rik 2310044G17Rik 2536 0.746 - 0.746 - - - -
48. Rab11b ENSMUSG00000077450 12058 0.742 0.742 - - - - - RAB11B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99425]
49. Tmem119 ENSMUSG00000054675 1681 0.742 0.742 - - - - - transmembrane protein 119 [Source:MGI Symbol;Acc:MGI:2385228]
50. Eif3g ENSMUSG00000070319 6281 0.741 0.741 - - - - - eukaryotic translation initiation factor 3, subunit G [Source:MGI Symbol;Acc:MGI:1858258]
51. Gng11 ENSMUSG00000032766 1581 0.741 0.741 - - - - - guanine nucleotide binding protein (G protein), gamma 11 [Source:MGI Symbol;Acc:MGI:1913316]
52. Grm4 ENSMUSG00000063239 430 0.741 0.741 - - - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
53. Gm8213 ENSMUSG00000082474 751 0.74 0.740 - - - - - predicted pseudogene 8213 [Source:MGI Symbol;Acc:MGI:3643597]
54. Wbp11 ENSMUSG00000030216 4813 0.738 0.738 - - - - - WW domain binding protein 11 [Source:MGI Symbol;Acc:MGI:1891823]
55. Noc4l ENSMUSG00000033294 1555 0.738 - - - - - 0.738 NOC4 like [Source:MGI Symbol;Acc:MGI:2140843]
56. Pi4k2b ENSMUSG00000029186 403 0.738 0.738 - - - - - phosphatidylinositol 4-kinase type 2 beta [Source:MGI Symbol;Acc:MGI:1914323]
57. Ptn ENSMUSG00000029838 7108 0.736 - - 0.736 - - - pleiotrophin [Source:MGI Symbol;Acc:MGI:97804]
58. Pet100 ENSMUSG00000087687 1379 0.736 - 0.736 - - - - PET100 homolog [Source:MGI Symbol;Acc:MGI:3615306]
59. Gm12122 ENSMUSG00000086311 200 0.736 - - - - - 0.736 predicted gene 12122 [Source:MGI Symbol;Acc:MGI:3650741]
60. Kifc5b ENSMUSG00000024301 269 0.736 0.736 - - - - - kinesin family member C5B [Source:MGI Symbol;Acc:MGI:2137414]
61. Map4k1 ENSMUSG00000037337 434 0.735 0.735 - - - - - mitogen-activated protein kinase kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346882]
62. 9130401M01Rik ENSMUSG00000101892, ENSMUSG00000116094 2031 0.735 0.735 - - - - - RIKEN cDNA 9130401M01 gene [Source:MGI Symbol;Acc:MGI:1923008]
63. Polr3c ENSMUSG00000028099 1591 0.735 0.735 - - - - - polymerase (RNA) III (DNA directed) polypeptide C [Source:MGI Symbol;Acc:MGI:1921664]
64. Etv4 ENSMUSG00000017724 232 0.735 0.735 - - - - - ets variant 4 [Source:MGI Symbol;Acc:MGI:99423]
65. Trim62 ENSMUSG00000041000 867 0.735 0.735 - - - - - tripartite motif-containing 62 [Source:MGI Symbol;Acc:MGI:1914775]
66. Slc7a5 ENSMUSG00000040010 313 0.734 0.734 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 [Source:MGI Symbol;Acc:MGI:1298205]
67. Gm20605 ENSMUSG00000029720 375 0.734 0.734 - - - - - predicted gene 20605 [Source:MGI Symbol;Acc:MGI:5306917]
68. Thoc6 ENSMUSG00000041319 1276 0.734 0.734 - - - - - THO complex 6 [Source:MGI Symbol;Acc:MGI:2677480]
69. Usp2 ENSMUSG00000032010 525 0.733 0.733 - - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
70. Zfp943 ENSMUSG00000053347 592 0.733 0.733 - - - - - zinc finger prtoein 943 [Source:MGI Symbol;Acc:MGI:1921920]
71. Bcam ENSMUSG00000002980 1395 0.733 0.733 - - - - - basal cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1929940]
72. Mastl ENSMUSG00000026779 843 0.733 0.733 - - - - - microtubule associated serine/threonine kinase-like [Source:MGI Symbol;Acc:MGI:1914371]
73. Nap1l5 ENSMUSG00000055430 301 0.733 0.733 - - - - - nucleosome assembly protein 1-like 5 [Source:MGI Symbol;Acc:MGI:1923555]
74. Zc3h8 ENSMUSG00000027387 363 0.733 0.733 - - - - - zinc finger CCCH type containing 8 [Source:MGI Symbol;Acc:MGI:1930128]
75. Chtf8 ENSMUSG00000046691 938 0.733 0.733 - - - - - CTF8, chromosome transmission fidelity factor 8 [Source:MGI Symbol;Acc:MGI:2443370]
76. Fahd1 ENSMUSG00000045316 533 0.732 0.732 - - - - - fumarylacetoacetate hydrolase domain containing 1 [Source:MGI Symbol;Acc:MGI:1915886]
77. Msl1 ENSMUSG00000052915 12723 0.732 - 0.732 - - - - male specific lethal 1 [Source:MGI Symbol;Acc:MGI:1921276]
78. Dmtf1 ENSMUSG00000042508 914 0.732 0.732 - - - - - cyclin D binding myb-like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344415]
79. Atf6 ENSMUSG00000026663 934 0.732 0.732 - - - - - activating transcription factor 6 [Source:MGI Symbol;Acc:MGI:1926157]
80. Zfp820 ENSMUSG00000069743 854 0.732 0.732 - - - - - zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
81. 2610021A01Rik ENSMUSG00000091474 463 0.732 0.732 - - - - - RIKEN cDNA 2610021A01 gene [Source:MGI Symbol;Acc:MGI:1922662]
82. Rsbn1 ENSMUSG00000044098 1083 0.732 0.732 - - - - - rosbin, round spermatid basic protein 1 [Source:MGI Symbol;Acc:MGI:2444993]
83. Clasrp ENSMUSG00000061028 843 0.732 0.732 - - - - - CLK4-associating serine/arginine rich protein [Source:MGI Symbol;Acc:MGI:1855695]
84. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 0.731 - - 0.731 - - - predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
85. Prkdc ENSMUSG00000022672 742 0.731 0.731 - - - - - protein kinase, DNA activated, catalytic polypeptide [Source:MGI Symbol;Acc:MGI:104779]
86. C920009B18Rik ENSMUSG00000097352 461 0.731 - - - - - 0.731 RIKEN cDNA C920009B18 gene [Source:MGI Symbol;Acc:MGI:3583961]
87. Shisa5 ENSMUSG00000025647 1562 0.73 0.730 - - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
88. Ubc ENSMUSG00000008348 12663 0.73 0.730 - - - - - ubiquitin C [Source:MGI Symbol;Acc:MGI:98889]
89. Guk1 ENSMUSG00000020444 1427 0.73 0.730 - - - - - guanylate kinase 1 [Source:MGI Symbol;Acc:MGI:95871]
90. Tbx2 ENSMUSG00000000093 1403 0.73 0.730 - - - - - T-box 2 [Source:MGI Symbol;Acc:MGI:98494]
91. Kremen1 ENSMUSG00000020393 424 0.73 0.730 - - - - - kringle containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1933988]
92. Dnal1 ENSMUSG00000042523 458 0.73 0.730 - - - - - dynein, axonemal, light chain 1 [Source:MGI Symbol;Acc:MGI:1921462]
93. Arrb1 ENSMUSG00000018909 902 0.729 0.729 - - - - - arrestin, beta 1 [Source:MGI Symbol;Acc:MGI:99473]
94. Lepre1 Lepre1 918 0.729 - - - - - 0.729
95. Mest ENSMUSG00000051855 5735 0.729 - 0.729 - - - - mesoderm specific transcript [Source:MGI Symbol;Acc:MGI:96968]
96. Ubxn1 ENSMUSG00000071655 5746 0.729 - 0.729 - - - - UBX domain protein 1 [Source:MGI Symbol;Acc:MGI:1289301]
97. Ptcd2 ENSMUSG00000021650 1967 0.728 0.728 - - - - - pentatricopeptide repeat domain 2 [Source:MGI Symbol;Acc:MGI:1916177]
98. Atg12 ENSMUSG00000032905 4891 0.728 - 0.728 - - - - autophagy related 12 [Source:MGI Symbol;Acc:MGI:1914776]
99. Gprasp2 ENSMUSG00000072966 2238 0.728 0.728 - - - - - G protein-coupled receptor associated sorting protein 2 [Source:MGI Symbol;Acc:MGI:2442071]
100. Nrf1 ENSMUSG00000058440 3663 0.727 0.727 - - - - - nuclear respiratory factor 1 [Source:MGI Symbol;Acc:MGI:1332235]

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA