Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Kdm4b

Gene Name Gene ID Reads Annotation
Kdm4b ENSMUSG00000024201 1440 lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]







Genes with expression patterns similar to Kdm4b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Kdm4b ENSMUSG00000024201 1440 6 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
2. Zzef1 ENSMUSG00000055670 953 1.9 0.994 - - - - 0.906 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
3. Rab1b ENSMUSG00000024870 4174 1.779 0.965 - - - - 0.814 RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]
4. Epb4.1l4a Epb4.1l4a 1817 1.772 0.993 - - - - 0.779
5. Nfyb ENSMUSG00000020248 4562 1.759 0.960 - - - - 0.799 nuclear transcription factor-Y beta [Source:MGI Symbol;Acc:MGI:97317]
6. Sgol1 1886 1.73 0.987 - - - - 0.743 shugoshin-like 1 (S. pombe), transcript variant X2
7. Upf1 ENSMUSG00000058301 1982 1.724 0.976 - - - - 0.748 UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
8. Tacc3 ENSMUSG00000037313 6332 1.707 0.953 - - - - 0.754 transforming, acidic coiled-coil containing protein 3 [Source:MGI Symbol;Acc:MGI:1341163]
9. Rsl24d1 ENSMUSG00000032215 6534 1.704 0.964 - - - - 0.740 ribosomal L24 domain containing 1 [Source:MGI Symbol;Acc:MGI:2681840]
10. Psmb5 ENSMUSG00000022193 5587 1.567 - - 0.704 - - 0.863 proteasome (prosome, macropain) subunit, beta type 5 [Source:MGI Symbol;Acc:MGI:1194513]
11. Cirh1a 3509 1.527 0.719 - - - - 0.808 cirrhosis, autosomal recessive 1A (human), transcript variant X1
12. Phb ENSMUSG00000038845 3385 1.446 - - 0.741 - - 0.705 prohibitin [Source:MGI Symbol;Acc:MGI:97572]
13. Gm12521 Gm12521 210 0.998 0.998 - - - - -
14. Lnx2 ENSMUSG00000016520 439 0.998 0.998 - - - - - ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
15. Nlrx1 ENSMUSG00000032109 363 0.998 0.998 - - - - - NLR family member X1 [Source:MGI Symbol;Acc:MGI:2429611]
16. Hdac9 ENSMUSG00000004698 287 0.998 0.998 - - - - - histone deacetylase 9 [Source:MGI Symbol;Acc:MGI:1931221]
17. Fsd1 ENSMUSG00000011589 902 0.998 0.998 - - - - - fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
18. Tmem8 ENSMUSG00000024180 228 0.998 0.998 - - - - - transmembrane protein 8 (five membrane-spanning domains) [Source:MGI Symbol;Acc:MGI:1926283]
19. Adam15 ENSMUSG00000028041 630 0.998 0.998 - - - - - a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]
20. Lmna ENSMUSG00000028063 622 0.998 0.998 - - - - - lamin A [Source:MGI Symbol;Acc:MGI:96794]
21. Mettl15 ENSMUSG00000057234 379 0.997 0.997 - - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
22. Ly75 ENSMUSG00000026980 766 0.997 0.997 - - - - - lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
23. Rprm ENSMUSG00000075334 1010 0.997 0.997 - - - - - reprimo, TP53 dependent G2 arrest mediator candidate [Source:MGI Symbol;Acc:MGI:1915124]
24. Yod1 ENSMUSG00000046404 793 0.997 0.997 - - - - - YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
25. Dqx1 ENSMUSG00000009145 545 0.997 0.997 - - - - - DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
26. Ebf4 ENSMUSG00000053552 463 0.997 0.997 - - - - - early B cell factor 4 [Source:MGI Symbol;Acc:MGI:2385972]
27. Nit2 ENSMUSG00000022751 895 0.997 0.997 - - - - - nitrilase family, member 2 [Source:MGI Symbol;Acc:MGI:1261838]
28. Gm13680 ENSMUSG00000081400 447 0.996 0.996 - - - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
29. Gm10177 ENSMUSG00000090136 864 0.996 0.996 - - - - - predicted gene 10177 [Source:MGI Symbol;Acc:MGI:3704330]
30. Ucp2 ENSMUSG00000033685 2664 0.996 0.996 - - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
31. Ccdc166 ENSMUSG00000098176 524 0.995 0.995 - - - - - coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]
32. Lrrc42 ENSMUSG00000028617 1235 0.994 0.994 - - - - - leucine rich repeat containing 42 [Source:MGI Symbol;Acc:MGI:1925059]
33. Cenpl ENSMUSG00000026708 1567 0.994 0.994 - - - - - centromere protein L [Source:MGI Symbol;Acc:MGI:1917704]
34. Clp1 ENSMUSG00000027079 3327 0.994 0.994 - - - - - CLP1, cleavage and polyadenylation factor I subunit [Source:MGI Symbol;Acc:MGI:2138968]
35. Cwc27 ENSMUSG00000021715 899 0.994 0.994 - - - - - CWC27 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1914535]
36. 2310061I04Rik ENSMUSG00000050705 1463 0.994 0.994 - - - - - RIKEN cDNA 2310061I04 gene [Source:MGI Symbol;Acc:MGI:1916912]
37. Dpep1 ENSMUSG00000019278 422 0.994 0.994 - - - - - dipeptidase 1 (renal) [Source:MGI Symbol;Acc:MGI:94917]
38. Haus8 ENSMUSG00000035439 1485 0.993 0.993 - - - - - 4HAUS augmin-like complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1923728]
39. Zfp574 ENSMUSG00000045252 1410 0.993 0.993 - - - - - zinc finger protein 574 [Source:MGI Symbol;Acc:MGI:2442951]
40. Cnot11 ENSMUSG00000003135 1391 0.993 0.993 - - - - - CCR4-NOT transcription complex, subunit 11 [Source:MGI Symbol;Acc:MGI:106580]
41. Arhgef6 ENSMUSG00000031133 320 0.992 0.992 - - - - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:1920591]
42. Med8 ENSMUSG00000006392 1655 0.992 0.992 - - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
43. Ccdc174 ENSMUSG00000034083 1439 0.992 0.992 - - - - - coiled-coil domain containing 174 [Source:MGI Symbol;Acc:MGI:2444652]
44. Kansl1 ENSMUSG00000018412 2084 0.991 0.991 - - - - - KAT8 regulatory NSL complex subunit 1 [Source:MGI Symbol;Acc:MGI:1923969]
45. Nhlrc2 ENSMUSG00000025078 1180 0.991 0.991 - - - - - NHL repeat containing 2 [Source:MGI Symbol;Acc:MGI:1914116]
46. Sh3gl3 ENSMUSG00000030638 2388 0.991 0.991 - - - - - SH3-domain GRB2-like 3 [Source:MGI Symbol;Acc:MGI:700011]
47. Pno1 ENSMUSG00000020116 5621 0.991 0.991 - - - - - partner of NOB1 homolog [Source:MGI Symbol;Acc:MGI:1913499]
48. Cep68 ENSMUSG00000044066 1055 0.988 0.988 - - - - - centrosomal protein 68 [Source:MGI Symbol;Acc:MGI:2667663]
49. Gm6483 ENSMUSG00000087153 1875 0.988 0.988 - - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
50. Chuk ENSMUSG00000025199 1732 0.988 0.988 - - - - - conserved helix-loop-helix ubiquitous kinase [Source:MGI Symbol;Acc:MGI:99484]
51. Bub1 ENSMUSG00000027379 1882 0.987 0.987 - - - - - BUB1, mitotic checkpoint serine/threonine kinase [Source:MGI Symbol;Acc:MGI:1100510]
52. Lin7c ENSMUSG00000027162 3559 0.986 0.986 - - - - - lin-7 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1330839]
53. Ets1 ENSMUSG00000032035 1513 0.985 0.985 - - - - - E26 avian leukemia oncogene 1, 5' domain [Source:MGI Symbol;Acc:MGI:95455]
54. Hipk1 ENSMUSG00000008730 2363 0.985 0.985 - - - - - homeodomain interacting protein kinase 1 [Source:MGI Symbol;Acc:MGI:1314873]
55. Stk3 ENSMUSG00000022329 1332 0.984 0.984 - - - - - serine/threonine kinase 3 [Source:MGI Symbol;Acc:MGI:1928487]
56. Cenpm ENSMUSG00000068101 2118 0.983 0.983 - - - - - centromere protein M [Source:MGI Symbol;Acc:MGI:1913820]
57. Mbtps2 ENSMUSG00000046873 1811 0.983 0.983 - - - - - membrane-bound transcription factor peptidase, site 2 [Source:MGI Symbol;Acc:MGI:2444506]
58. Kalrn ENSMUSG00000061751 1798 0.983 0.983 - - - - - kalirin, RhoGEF kinase [Source:MGI Symbol;Acc:MGI:2685385]
59. Ppfibp1 ENSMUSG00000016487 1415 0.983 0.983 - - - - - PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:MGI Symbol;Acc:MGI:1914783]
60. Mar-05 Mar-05 5896 0.982 0.982 - - - - -
61. Lrrc1 ENSMUSG00000032352 1281 0.982 0.982 - - - - - leucine rich repeat containing 1 [Source:MGI Symbol;Acc:MGI:2442313]
62. H1f0 ENSMUSG00000096210 6629 0.982 0.982 - - - - - H1 histone family, member 0 [Source:MGI Symbol;Acc:MGI:95893]
63. 2010003O02Rik 2010003O02Rik 2896 0.982 0.982 - - - - -
64. AW549877 ENSMUSG00000041935 2924 0.982 0.982 - - - - - expressed sequence AW549877 [Source:MGI Symbol;Acc:MGI:2146232]
65. Spast ENSMUSG00000024068 2727 0.981 0.981 - - - - - spastin [Source:MGI Symbol;Acc:MGI:1858896]
66. AI846148 3356 0.98 0.980 - - - - - expressed sequence AI846148, transcript variant X2
67. Fam160b1 ENSMUSG00000033478 2187 0.98 0.980 - - - - - family with sequence similarity 160, member B1 [Source:MGI Symbol;Acc:MGI:2147545]
68. Cd151 ENSMUSG00000025510 2760 0.98 0.980 - - - - - CD151 antigen [Source:MGI Symbol;Acc:MGI:1096360]
69. Txndc17 ENSMUSG00000020803 3761 0.98 0.980 - - - - - thioredoxin domain containing 17 [Source:MGI Symbol;Acc:MGI:1289248]
70. Zkscan1 ENSMUSG00000029729 2845 0.98 0.980 - - - - - zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
71. Poldip2 ENSMUSG00000001100 3214 0.98 0.980 - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:MGI Symbol;Acc:MGI:1915061]
72. 1110001J03Rik 2404 0.98 0.980 - - - - - RIKEN cDNA 1110001J03 gene
73. Mbnl2 ENSMUSG00000022139 3296 0.98 0.980 - - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
74. Rhot1 ENSMUSG00000017686 4099 0.979 0.979 - - - - - ras homolog family member T1 [Source:MGI Symbol;Acc:MGI:1926078]
75. Gatad1 ENSMUSG00000007415 3350 0.979 0.979 - - - - - GATA zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1914460]
76. Immp1l ENSMUSG00000042670 2132 0.978 0.978 - - - - - IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913791]
77. Gm12940 ENSMUSG00000085334 1603 0.978 0.978 - - - - - predicted gene 12940 [Source:MGI Symbol;Acc:MGI:3702626]
78. Nek9 ENSMUSG00000034290 2314 0.978 0.978 - - - - - NIMA (never in mitosis gene a)-related expressed kinase 9 [Source:MGI Symbol;Acc:MGI:2387995]
79. Sos2 ENSMUSG00000034801 3613 0.978 0.978 - - - - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:MGI Symbol;Acc:MGI:98355]
80. Ctsl ENSMUSG00000021477 3529 0.977 0.977 - - - - - cathepsin L [Source:MGI Symbol;Acc:MGI:88564]
81. Crmp1 ENSMUSG00000029121 3165 0.977 0.977 - - - - - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
82. Sestd1 ENSMUSG00000042272 2490 0.976 0.976 - - - - - SEC14 and spectrin domains 1 [Source:MGI Symbol;Acc:MGI:1916262]
83. Sppl2a ENSMUSG00000027366 1802 0.976 0.976 - - - - - signal peptide peptidase like 2A [Source:MGI Symbol;Acc:MGI:1913802]
84. Stag2 ENSMUSG00000025862 3862 0.974 0.974 - - - - - stromal antigen 2 [Source:MGI Symbol;Acc:MGI:1098583]
85. Zmpste24 ENSMUSG00000043207 2857 0.973 0.973 - - - - - zinc metallopeptidase, STE24 [Source:MGI Symbol;Acc:MGI:1890508]
86. Stau1 ENSMUSG00000039536 3392 0.973 0.973 - - - - - staufen double-stranded RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1338864]
87. 5830418K08Rik 5830418K08Rik 1814 0.973 0.973 - - - - -
88. Zkscan8 ENSMUSG00000063894 1669 0.973 0.973 - - - - - zinc finger with KRAB and SCAN domains 8 [Source:MGI Symbol;Acc:MGI:1913815]
89. Ccdc23 Ccdc23 2476 0.971 0.971 - - - - -
90. Gm16089 ENSMUSG00000081228 1617 0.971 0.971 - - - - - predicted gene 16089 [Source:MGI Symbol;Acc:MGI:3801884]
91. Tgoln1 ENSMUSG00000056429 3152 0.971 0.971 - - - - - trans-golgi network protein [Source:MGI Symbol;Acc:MGI:105080]
92. Bod1l ENSMUSG00000061755 2689 0.968 0.968 - - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
93. Tspyl1 ENSMUSG00000047514 2858 0.967 0.967 - - - - - testis-specific protein, Y-encoded-like 1 [Source:MGI Symbol;Acc:MGI:1298395]
94. Safb2 ENSMUSG00000042625 4475 0.966 0.966 - - - - - scaffold attachment factor B2 [Source:MGI Symbol;Acc:MGI:2146808]
95. Gm10718 ENSMUSG00000095186 877 0.965 0.965 - - - - - predicted gene 10718 [Source:MGI Symbol;Acc:MGI:3642028]
96. Cnot2 ENSMUSG00000020166 5331 0.965 0.965 - - - - - CCR4-NOT transcription complex, subunit 2 [Source:MGI Symbol;Acc:MGI:1919318]
97. Isoc1 ENSMUSG00000024601 3341 0.964 0.964 - - - - - isochorismatase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913557]
98. Rock2 ENSMUSG00000020580 3652 0.963 0.963 - - - - - Rho-associated coiled-coil containing protein kinase 2 [Source:MGI Symbol;Acc:MGI:107926]
99. Cdca3 ENSMUSG00000023505 4570 0.963 0.963 - - - - - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
100. Mrpl28 ENSMUSG00000024181 1602 0.959 0.959 - - - - - mitochondrial ribosomal protein L28 [Source:MGI Symbol;Acc:MGI:1915861]

There are 509 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA