Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Kdm1b

Gene Name Gene ID Reads Annotation
Kdm1b ENSMUSG00000038080 577 lysine (K)-specific demethylase 1B [Source:MGI Symbol;Acc:MGI:2145261]







Genes with expression patterns similar to Kdm1b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Kdm1b ENSMUSG00000038080 577 6 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 1B [Source:MGI Symbol;Acc:MGI:2145261]
2. Zfp609 ENSMUSG00000040524 1316 1.66 - 0.943 - - - 0.717 zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
3. Tmem243 ENSMUSG00000079659 181 0.967 - 0.967 - - - - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
4. Wnk3 ENSMUSG00000041245 552 0.965 - 0.965 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
5. Pigs ENSMUSG00000041958 765 0.963 - 0.963 - - - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:MGI Symbol;Acc:MGI:2687325]
6. Gm10689 ENSMUSG00000074412 328 0.958 - 0.958 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]
7. Slc16a9 ENSMUSG00000037762 83 0.956 - 0.956 - - - - solute carrier family 16 (monocarboxylic acid transporters), member 9 [Source:MGI Symbol;Acc:MGI:1914109]
8. Ccar2 ENSMUSG00000033712 2357 0.956 - 0.956 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
9. Scara5 ENSMUSG00000022032 68 0.956 - 0.956 - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
10. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.956 - 0.956 - - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
11. Gm10307 ENSMUSG00000101093 159 0.955 - 0.955 - - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
12. Gnpda2 ENSMUSG00000029209 182 0.955 - 0.955 - - - - glucosamine-6-phosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:1915230]
13. Ube2g2 ENSMUSG00000009293 1035 0.955 - 0.955 - - - - ubiquitin-conjugating enzyme E2G 2 [Source:MGI Symbol;Acc:MGI:1343188]
14. C2cd2l ENSMUSG00000032120 223 0.955 - 0.955 - - - - C2 calcium-dependent domain containing 2-like [Source:MGI Symbol;Acc:MGI:1919014]
15. Fam120aos ENSMUSG00000097059 81 0.954 - 0.954 - - - - family with sequence similarity 120A, opposite strand [Source:MGI Symbol;Acc:MGI:1915378]
16. Gm8349 ENSMUSG00000098208 124 0.954 - 0.954 - - - - predicted gene 8349 [Source:MGI Symbol;Acc:MGI:3643135]
17. Rfx5 ENSMUSG00000005774 204 0.954 - 0.954 - - - - regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
18. Fam132b 102 0.954 - 0.954 - - - - family with sequence similarity 132, member B, transcript variant X3
19. Gm4335 ENSMUSG00000097989 113 0.954 - 0.954 - - - - predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
20. Gm16300 ENSMUSG00000089828 225 0.952 - 0.952 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
21. Gm16409 ENSMUSG00000075581 176 0.952 - 0.952 - - - - predicted gene 16409 [Source:MGI Symbol;Acc:MGI:3646708]
22. Prcc ENSMUSG00000004895 527 0.952 - 0.952 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
23. Gm13652 ENSMUSG00000087333 91 0.952 - 0.952 - - - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
24. Zfp947 ENSMUSG00000063383 396 0.951 - 0.951 - - - - zinc finger protein 947 [Source:MGI Symbol;Acc:MGI:3646759]
25. Zswim1 ENSMUSG00000017764 460 0.951 - 0.951 - - - - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
26. Dpy19l4 ENSMUSG00000045205 962 0.951 - 0.951 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
27. Pgap1 ENSMUSG00000073678 833 0.95 - 0.950 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
28. Pdgfb ENSMUSG00000000489 325 0.95 - 0.950 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
29. Usf1 ENSMUSG00000026641 336 0.95 - 0.950 - - - - upstream transcription factor 1 [Source:MGI Symbol;Acc:MGI:99542]
30. Phospho2 ENSMUSG00000027088 921 0.95 - 0.950 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
31. Gm15879 ENSMUSG00000084790 387 0.949 - 0.949 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
32. Gm11944 ENSMUSG00000084941 286 0.949 - 0.949 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
33. Dido1 ENSMUSG00000038914 1891 0.949 - 0.949 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
34. 0610005C13Rik ENSMUSG00000109644 478 0.948 - 0.948 - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
35. 0610010F05Rik ENSMUSG00000042208 755 0.947 - 0.947 - - - - RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
36. Cyr61 ENSMUSG00000028195 563 0.947 - 0.947 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
37. Gm16702 ENSMUSG00000097796 133 0.947 - 0.947 - - - - predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
38. Pan2 ENSMUSG00000005682 912 0.947 - 0.947 - - - - PAN2 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1918984]
39. Dzank1 ENSMUSG00000037259 518 0.946 - 0.946 - - - - double zinc ribbon and ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:2139080]
40. Arhgap23 ENSMUSG00000049807 1316 0.945 - 0.945 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
41. Phyh ENSMUSG00000026664 659 0.944 - 0.944 - - - - phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
42. Vps9d1 ENSMUSG00000001062 694 0.944 - 0.944 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
43. Mtx3 ENSMUSG00000021704 616 0.943 - 0.943 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
44. Nsun4 ENSMUSG00000028706 804 0.943 - 0.943 - - - - NOL1/NOP2/Sun domain family, member 4 [Source:MGI Symbol;Acc:MGI:1919431]
45. Map10 ENSMUSG00000050930 246 0.943 - 0.943 - - - - microtubule-associated protein 10 [Source:MGI Symbol;Acc:MGI:1921643]
46. 4632434I11Rik 4632434I11Rik 951 0.942 - 0.942 - - - -
47. Tapt1 ENSMUSG00000046985 1206 0.942 - 0.942 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
48. 4933415A04Rik ENSMUSG00000045877 412 0.942 - 0.942 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
49. Chfr ENSMUSG00000014668 1287 0.941 - 0.941 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
50. Fndc3a ENSMUSG00000033487 1185 0.941 - 0.941 - - - - fibronectin type III domain containing 3A [Source:MGI Symbol;Acc:MGI:1196463]
51. Rrp15 ENSMUSG00000001305 966 0.94 - 0.940 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
52. Sec11c ENSMUSG00000024516 640 0.94 - 0.940 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
53. Rspo2 ENSMUSG00000051920 204 0.939 - 0.939 - - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
54. Taf1b ENSMUSG00000059669 413 0.939 - 0.939 - - - - TATA-box binding protein associated factor, RNA polymerase I, B [Source:MGI Symbol;Acc:MGI:109577]
55. Acsl3 ENSMUSG00000032883 1975 0.939 - 0.939 - - - - acyl-CoA synthetase long-chain family member 3 [Source:MGI Symbol;Acc:MGI:1921455]
56. Pank1 ENSMUSG00000033610 1083 0.939 - 0.939 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
57. Usp2 ENSMUSG00000032010 525 0.938 - 0.938 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
58. Gm26822 ENSMUSG00000096921 421 0.938 - 0.938 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
59. Med13l ENSMUSG00000018076 1863 0.937 - 0.937 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
60. Fbn1 ENSMUSG00000027204 960 0.937 - 0.937 - - - - fibrillin 1 [Source:MGI Symbol;Acc:MGI:95489]
61. Fam3c ENSMUSG00000029672 1429 0.936 - 0.936 - - - - family with sequence similarity 3, member C [Source:MGI Symbol;Acc:MGI:107892]
62. Tln2 ENSMUSG00000052698 938 0.935 - 0.935 - - - - talin 2 [Source:MGI Symbol;Acc:MGI:1917799]
63. Oprm1 ENSMUSG00000000766 292 0.935 - 0.935 - - - - opioid receptor, mu 1 [Source:MGI Symbol;Acc:MGI:97441]
64. Ubox5 ENSMUSG00000027300 434 0.934 - 0.934 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
65. Dip2a ENSMUSG00000020231 649 0.934 - 0.934 - - - - disco interacting protein 2 homolog A [Source:MGI Symbol;Acc:MGI:2385920]
66. Pigu ENSMUSG00000038383 705 0.933 - 0.933 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
67. Cryzl1 ENSMUSG00000058240 2195 0.933 - 0.933 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
68. Lamtor2 ENSMUSG00000028062 570 0.931 - 0.931 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
69. Erlin1 ENSMUSG00000025198 667 0.931 - 0.931 - - - - ER lipid raft associated 1 [Source:MGI Symbol;Acc:MGI:2387613]
70. AW209491 ENSMUSG00000039182 618 0.93 - 0.930 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
71. Tceal3 ENSMUSG00000044550 742 0.93 - 0.930 - - - - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
72. Mex3d ENSMUSG00000048696 2206 0.93 - 0.930 - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
73. Crcp ENSMUSG00000025532 699 0.93 - 0.930 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
74. Phkb ENSMUSG00000036879 701 0.929 - 0.929 - - - - phosphorylase kinase beta [Source:MGI Symbol;Acc:MGI:97578]
75. Ednra ENSMUSG00000031616 1286 0.929 - 0.929 - - - - endothelin receptor type A [Source:MGI Symbol;Acc:MGI:105923]
76. Rrnad1 ENSMUSG00000004896 798 0.927 - 0.927 - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387197]
77. Actr3 ENSMUSG00000026341 4146 0.926 - 0.926 - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
78. E130307A14Rik ENSMUSG00000087177 1348 0.925 - 0.925 - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
79. Gm16536 ENSMUSG00000089810 948 0.925 - 0.925 - - - - predicted gene 16536 [Source:MGI Symbol;Acc:MGI:4414956]
80. Zswim7 ENSMUSG00000014243 799 0.925 - 0.925 - - - - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
81. Evi5l ENSMUSG00000011832 691 0.925 - 0.925 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
82. Aldh5a1 ENSMUSG00000035936 922 0.923 - 0.923 - - - - aldhehyde dehydrogenase family 5, subfamily A1 [Source:MGI Symbol;Acc:MGI:2441982]
83. Atp8a1 ENSMUSG00000037685 1155 0.922 - 0.922 - - - - ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
84. Mcam ENSMUSG00000032135 610 0.922 - 0.922 - - - - melanoma cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1933966]
85. Rab3gap1 ENSMUSG00000036104 515 0.922 - 0.922 - - - - RAB3 GTPase activating protein subunit 1 [Source:MGI Symbol;Acc:MGI:2445001]
86. Gm12005 ENSMUSG00000081631 601 0.922 - 0.922 - - - - predicted gene 12005 [Source:MGI Symbol;Acc:MGI:3651316]
87. Mef2c ENSMUSG00000005583 2710 0.921 - 0.921 - - - - myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458]
88. Snapc3 ENSMUSG00000028483 2319 0.92 - 0.920 - - - - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
89. Tgfbrap1 ENSMUSG00000070939 1413 0.92 - 0.920 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
90. Sugp2 ENSMUSG00000036054 1239 0.92 - 0.920 - - - - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
91. Mns1 ENSMUSG00000032221 1295 0.919 - 0.919 - - - - meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933]
92. Pdcd11 ENSMUSG00000025047 1164 0.918 - 0.918 - - - - programmed cell death 11 [Source:MGI Symbol;Acc:MGI:1341788]
93. Ube2e2 ENSMUSG00000058317 729 0.918 - 0.918 - - - - ubiquitin-conjugating enzyme E2E 2 [Source:MGI Symbol;Acc:MGI:2384997]
94. Heatr5a ENSMUSG00000035181 1099 0.918 - 0.918 - - - - HEAT repeat containing 5A [Source:MGI Symbol;Acc:MGI:2444133]
95. Klf11 ENSMUSG00000020653 838 0.917 - 0.917 - - - - Kruppel-like factor 11 [Source:MGI Symbol;Acc:MGI:2653368]
96. Zfp407 ENSMUSG00000048410 2356 0.917 - 0.917 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
97. Zfp30 ENSMUSG00000047473 562 0.915 - 0.915 - - - - zinc finger protein 30 [Source:MGI Symbol;Acc:MGI:99178]
98. Slc50a1 ENSMUSG00000027953 774 0.915 - 0.915 - - - - solute carrier family 50 (sugar transporter), member 1 [Source:MGI Symbol;Acc:MGI:107417]
99. Rrp7a ENSMUSG00000018040 942 0.915 - 0.915 - - - - ribosomal RNA processing 7 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1922028]
100. Cirbp ENSMUSG00000045193 1324 0.915 - 0.915 - - - - cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588]

There are 261 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA