Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KNOP1

Gene Name Gene ID Reads Annotation
KNOP1 ENSGALG00000002042 6251 lysine-rich nucleolar protein 1, transcript variant X1











Genes with expression patterns similar to KNOP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KNOP1 ENSGALG00000002042 6251 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine-rich nucleolar protein 1, transcript variant X1
2. NFASC ENSGALG00000031776 4264 1.967 - - - - 0.985 - - 0.982 - - neurofascin [Source:NCBI gene;Acc:419824]
3. NAP1L1 ENSGALG00000010238 14506 1.766 0.774 - - - 0.992 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
4. EPS15 ENSGALG00000010543 1598 1.754 - - - - - - 0.770 0.984 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
5. ANKRD17 ENSGALG00000011642 3192 1.715 0.730 - - - - - - 0.985 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
6. PNRC2 ENSGALG00000004122 19228 1.71 - - - - 0.938 - - 0.772 - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
7. SMC2 ENSGALG00000015691 34013 1.652 0.771 - - - 0.881 - - - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
8. METTL23 ENSGALG00000001790 7906 1.652 - - - - 0.942 - 0.710 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
9. RBBP6 ENSGALG00000006043 9708 1.641 0.783 - - - - - - 0.858 - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
10. ARID4B ENSGALG00000034003 5364 1.617 - - - - 0.827 - 0.790 - - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
11. USP10 ENSGALG00000005674 7768 1.532 0.706 - - - 0.826 - - - - - ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
12. ENSGALG00000011687 ENSGALG00000011687 4553 0.997 - - - - 0.997 - - - - -
13. EAPP ENSGALG00000010007 5080 0.996 - - - - 0.996 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
14. IGF1R ENSGALG00000040651 772 0.996 - - - - 0.996 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
15. ZBTB10 ENSGALG00000034376 3271 0.995 - - - - 0.995 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
16. CTSZ ENSGALG00000007462 630 0.995 - - - - 0.995 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
17. ELL2 ENSGALG00000014678 1111 0.995 - - - - 0.995 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
18. XPO7 ENSGALG00000001838 1875 0.995 - - - - 0.995 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
19. DDX55 ENSGALG00000003298 2315 0.995 - - - - 0.995 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
20. REST 2394 0.995 - - - - 0.995 - - - - - RE1 silencing transcription factor
21. SSPN ENSGALG00000014042 638 0.995 - - - - 0.995 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
22. DNAJC12 ENSGALG00000002769 1418 0.994 - - - - 0.994 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
23. BAG4 ENSGALG00000003254 5751 0.993 - - - - 0.993 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
24. TCP11L1 ENSGALG00000011688 2427 0.993 - - - - 0.993 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
25. ATG5 ENSGALG00000015387 7752 0.992 - - - - 0.992 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
26. TRAPPC12 ENSGALG00000016387 2593 0.992 - - - - 0.992 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
27. TLCD1 ENSGALG00000003973 17569 0.991 - - - - 0.991 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
28. H2AFY_1 ENSGALG00000040141 4895 0.99 - - - - - - - 0.990 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
29. NAA50 ENSGALG00000033889 3551 0.99 - - - - - - - 0.990 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
30. CBWD1 ENSGALG00000010147 2765 0.99 - - - - 0.990 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
31. RABEP1 ENSGALG00000001737 2650 0.99 - - - - 0.990 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
32. CZH9ORF41 CZH9ORF41 3492 0.99 - - - - 0.990 - - - - -
33. COIL ENSGALG00000003158 7806 0.99 - - - - 0.990 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
34. STK3 ENSGALG00000032850 6339 0.989 - - - - 0.989 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
35. POLR2B ENSGALG00000011387 4864 0.989 - - - - 0.989 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
36. MRPS27 ENSGALG00000015002 6541 0.989 - - - - 0.989 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
37. YY1 ENSGALG00000017388 1933 0.989 - - - - 0.989 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
38. PGS1 ENSGALG00000007181 3187 0.989 - - - - - - - 0.989 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
39. CSNK1G1 ENSGALG00000030812 31618 0.989 - - - - 0.989 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
40. SSR2 ENSGALG00000000764 32190 0.989 - - - - 0.989 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
41. MKI67 ENSGALG00000025996 28136 0.989 - - - - 0.989 - - - - - marker of proliferation Ki-67, transcript variant X3
42. COMMD8 ENSGALG00000026279 13509 0.988 - - - - 0.988 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
43. WDR82 ENSGALG00000025904 4783 0.988 - - - - 0.988 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
44. RBM6 ENSGALG00000035578 1690 0.988 - - - - - - - 0.988 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
45. TLK2 ENSGALG00000000410 4690 0.988 - - - - 0.988 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
46. FH ENSGALG00000013165 13669 0.988 - - - - 0.988 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
47. MTRF1 ENSGALG00000016951 3983 0.988 - - - - - - - 0.988 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
48. MRPS25 ENSGALG00000008506 12131 0.987 - - - - 0.987 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
49. ADD1 ENSGALG00000015664 6828 0.987 - - - - - - - 0.987 - - adducin 1 [Source:NCBI gene;Acc:422882]
50. EED ENSGALG00000014060 6467 0.987 - - - - - - - 0.987 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
51. FGFRL1 ENSGALG00000037525 1687 0.987 - - - - - - - 0.987 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
52. SHROOM2 ENSGALG00000030802 4517 0.987 - - - - 0.987 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
53. SIRT1 ENSGALG00000002761 9028 0.987 - - - - 0.987 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
54. TMEM165 ENSGALG00000027886 5468 0.987 - - - - 0.987 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
55. POLR3F ENSGALG00000008749 5645 0.986 - - - - 0.986 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
56. PTPN11 ENSGALG00000004821 2658 0.986 - - - - - - - 0.986 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
57. FERMT2 ENSGALG00000012425 5480 0.986 - - - - 0.986 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
58. PPT1 ENSGALG00000003936 2540 0.986 - - - - - - - 0.986 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
59. ADARB1 ENSGALG00000007527 2480 0.986 - - - - - - - 0.986 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
60. gga-mir-1787 ENSGALG00000025542 1373 0.986 - - - - - - - 0.986 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
61. CMC1 ENSGALG00000025811 3939 0.985 - - - - - - - 0.985 - - C-X9-C motif containing 1
62. IGBP1 ENSGALG00000044628 9200 0.985 - - - - 0.985 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
63. FBXW8 ENSGALG00000008207 1639 0.985 - - - - - - - 0.985 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
64. TMEM100 ENSGALG00000026465 1785 0.985 - - - - - - - 0.985 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
65. KCTD9 ENSGALG00000000275 3455 0.985 - - - - - - - 0.985 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
66. ENSGALG00000026930 ENSGALG00000026930 681 0.985 - - - - - - - 0.985 - -
67. TECPR2 ENSGALG00000011373 1063 0.985 - - - - - - - 0.985 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
68. LATS2 4776 0.985 - - - - 0.985 - - - - - large tumor suppressor kinase 2
69. LIN7C ENSGALG00000012170 5043 0.985 - - - - - - - 0.985 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
70. MAK16 ENSGALG00000001663 7455 0.985 - - - - - - - 0.985 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
71. VRK1 ENSGALG00000011116 4524 0.985 - - - - - - - 0.985 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
72. PRORSD1P ENSGALG00000034854 2924 0.984 - - - - - - - 0.984 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
73. DDHD1 ENSGALG00000012426 6068 0.984 - - - - - - - 0.984 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
74. MRPL23 ENSGALG00000006561 13737 0.984 - - - - 0.984 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
75. SNCAIP ENSGALG00000005330 2425 0.984 - - - - - - - 0.984 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
76. VPS13B 2293 0.984 - - - - - - - 0.984 - - vacuolar protein sorting 13 homolog B
77. DENND5B 4077 0.984 - - - - - - - 0.984 - - DENN domain containing 5B, transcript variant X1
78. DOCK8 481 0.984 - - - - - - - 0.984 - - dedicator of cytokinesis 8, transcript variant X1
79. RPAP1 ENSGALG00000008624 3522 0.983 - - - - - - - 0.983 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
80. KDM4B ENSGALG00000034592 6711 0.983 - - - - - - - 0.983 - - lysine demethylase 4B, transcript variant X8
81. ZMYM4 ENSGALG00000002499 435 0.983 - - - - - - - 0.983 - - zinc finger MYM-type containing 4, transcript variant X1
82. PAX-6 PAX-6 2650 0.983 - - - - - - - 0.983 - -
83. RIOK1 ENSGALG00000012795 4658 0.983 - - - - - - - 0.983 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
84. CDC42SE2 ENSGALG00000027258 4725 0.982 - - - - 0.982 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
85. FAS ENSGALG00000006351 461 0.982 - - - - - - - 0.982 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
86. PUM1 ENSGALG00000042598 9392 0.982 - - - - 0.982 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
87. FBXO9 ENSGALG00000016320 9600 0.982 - - - - 0.982 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
88. KIAA1432 KIAA1432 1792 0.982 - - - - - - - 0.982 - -
89. MB21D1 2460 0.981 - - - - - - - 0.981 - - Mab-21 domain containing 1
90. ACAP2 ENSGALG00000007040 4182 0.981 - - - - - - - 0.981 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
91. TK2 ENSGALG00000034216 5394 0.98 - - - - 0.980 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
92. AATF ENSGALG00000005420 6501 0.98 - - - - 0.980 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
93. RHOT1 ENSGALG00000003397 5149 0.98 - - - - - - - 0.980 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
94. REEP5 ENSGALG00000023157 6282 0.98 - - - - 0.980 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
95. SAR1B ENSGALG00000038753 6493 0.978 - - - - 0.978 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
96. PSPC1 ENSGALG00000017142 13036 0.978 - - - - 0.978 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
97. PLAA ENSGALG00000001782 5459 0.978 - - - - 0.978 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
98. OMA1 ENSGALG00000010861 3328 0.978 - - - - - - - 0.978 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
99. ENSGALG00000014852 ENSGALG00000014852 15288 0.977 - - - - 0.977 - - - - -
100. SH2D3C ENSGALG00000005036 5101 0.976 - - - - 0.976 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]

There are 323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA