Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KLHDC4

Gene Name Gene ID Reads Annotation
KLHDC4 ENSGALG00000037315 9828 kelch domain containing 4 [Source:NCBI gene;Acc:415831]











Genes with expression patterns similar to KLHDC4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KLHDC4 ENSGALG00000037315 9828 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 kelch domain containing 4 [Source:NCBI gene;Acc:415831]
2. AP2A2 ENSGALG00000006799 13874 1.727 - - - - - - 0.834 0.893 - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
3. PLRG1 ENSGALG00000009257 8613 1.719 - - - - - - 0.841 0.878 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
4. UBE2V1 ENSGALG00000008015 17947 1.676 - - - - - - 0.833 0.843 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
5. METTL23 ENSGALG00000001790 7906 1.654 - - - - - - 0.781 0.873 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
6. THUMPD3 ENSGALG00000008394 17711 1.645 - - - - - - 0.799 0.846 - - THUMP domain containing 3, transcript variant X2
7. PCNP ENSGALG00000015330 15750 1.624 - - - - - - 0.740 0.884 - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
8. PAXIP1 ENSGALG00000036064 3120 1.622 - - - - - - 0.824 0.798 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
9. CEP78 ENSGALG00000015179 5227 1.621 - - - - - - 0.770 0.851 - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
10. BIRC6 ENSGALG00000010541 7999 1.62 - - - - - - 0.863 0.757 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
11. SCCPDH ENSGALG00000010641 8624 1.62 - - - - - - 0.757 0.863 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
12. DHX38 ENSGALG00000000787 6913 1.616 - - - - - - 0.794 0.822 - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
13. MED23 ENSGALG00000040607 5105 1.591 - - - - - - 0.732 0.859 - - mediator complex subunit 23 [Source:HGNC Symbol;Acc:HGNC:2372]
14. C6ORF162 C6ORF162 4217 1.585 - - - - - - 0.837 0.748 - -
15. NDUFS1 ENSGALG00000008606 7898 1.572 - - - - - - 0.760 0.812 - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:NCBI gene;Acc:424102]
16. ZBTB16 ENSGALG00000038540 5544 1.571 - - - - - - 0.781 0.790 - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
17. PRPSAP2 ENSGALG00000005064 5549 1.571 - - - - - - 0.808 0.763 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
18. CXXC5 ENSGALG00000000884 16351 1.57 - - - - - - 0.730 0.840 - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
19. LRRFIP2 ENSGALG00000033102 8250 1.561 - - - - - - 0.779 0.782 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
20. BRMS1L ENSGALG00000010093 4964 1.558 - - - - - - 0.810 - 0.748 - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
21. SCML2 ENSGALG00000016537 9348 1.555 - - - - - - 0.727 0.828 - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
22. SMU1 ENSGALG00000002014 8136 1.554 - - - - - - 0.741 0.813 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
23. HOXA9 ENSGALG00000028983 9298 1.552 - - - - - - 0.746 0.806 - - homeobox A9 [Source:NCBI gene;Acc:396096]
24. THAP5 ENSGALG00000009494 6540 1.547 - - - - - - 0.743 0.804 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
25. RAD50 ENSGALG00000006794 4308 1.544 - - - - - - 0.759 0.785 - - RAD50 double strand break repair protein, transcript variant X4
26. HIBADH ENSGALG00000033207 3540 1.531 - - - - - - 0.758 0.773 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
27. TAF7 4725 1.527 - - - - - - 0.746 0.781 - - TATA-box binding protein associated factor 7, transcript variant X1
28. TMED7 ENSGALG00000028484 21008 1.524 - - - - - - 0.811 0.713 - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
29. RAD21 ENSGALG00000029523 25658 1.524 - - - - - - 0.795 - 0.729 - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
30. ECHDC2 ENSGALG00000010647 4413 1.511 - - - - - - 0.779 0.732 - - enoyl-CoA hydratase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23408]
31. PDZRN3 ENSGALG00000007819 4139 1.51 - - - - - - 0.716 0.794 - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
32. SH3GLB1 ENSGALG00000006284 12764 1.505 - - - - - - 0.703 0.802 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
33. HEATR6 ENSGALG00000005516 3347 1.498 - - - - - - 0.720 0.778 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
34. PIK3IP1 ENSGALG00000006942 8388 1.496 - - - - - - 0.739 - 0.757 - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
35. GID8 ENSGALG00000005700 3992 1.494 - - - - - - 0.731 0.763 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
36. GPR162 ENSGALG00000022926 7181 1.486 - - - - - - 0.741 - 0.745 - G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
37. YOD1 ENSGALG00000037597 2989 1.477 - - - - - - 0.708 0.769 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
38. CSTF2 ENSGALG00000006760 8820 1.471 - - - - - - 0.727 0.744 - - cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:422258]
39. KLHL13 KLHL13 2712 1.469 - - - - - - 0.744 0.725 - -
40. SRFBP1 ENSGALG00000005316 6826 1.454 - - - - - - 0.719 0.735 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
41. GPR161 ENSGALG00000015247 3473 1.453 - - - - - - 0.749 - 0.704 - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
42. RIPK1 ENSGALG00000012827 3405 1.453 - - - - - - 0.737 0.716 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
43. NDUFAB1 ENSGALG00000006073 40467 1.449 - - - - 0.708 - 0.741 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
44. DYRK2 ENSGALG00000009901 3141 1.449 - - - - 0.700 - 0.749 - - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
45. LTN1 ENSGALG00000015804 3784 1.447 - - - - - - 0.734 0.713 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
46. PPFIA1 ENSGALG00000035774 5258 1.437 - - - - - - 0.712 - 0.725 - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
47. RUVBL1 ENSGALG00000005931 9379 0.892 - - - - - - 0.892 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
48. LSM5 ENSGALG00000041625 22307 0.891 - - - - - - 0.891 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
49. TMEM167A ENSGALG00000027332 13862 0.889 - - - - - - 0.889 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
50. CLPTM1L ENSGALG00000013187 9733 0.884 - - - - - - - 0.884 - - CLPTM1 like [Source:NCBI gene;Acc:420973]
51. NAA25 ENSGALG00000041821 12729 0.884 - - - - - - - 0.884 - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
52. SNRNP27 ENSGALG00000013883 22212 0.883 - - - - - - 0.883 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
53. SPCS1 ENSGALG00000001655 7718 0.881 - - - - - - 0.881 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
54. WDR12 ENSGALG00000008470 7654 0.881 - - - - - - - 0.881 - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
55. USP14 ENSGALG00000014920 18778 0.88 - - - - - - - 0.880 - - ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
56. HSPA4 ENSGALG00000040882 20966 0.877 - - - - - - 0.877 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
57. CLNS1A ENSGALG00000008574 25675 0.876 - - - - - - 0.876 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
58. RSL1D1 ENSGALG00000033690 13638 0.873 - - - - - - 0.873 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
59. EIF2D ENSGALG00000000856 8348 0.873 - - - - - - - 0.873 - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]
60. FXR1 ENSGALG00000008864 10250 0.872 - - - - - - 0.872 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
61. UBE2G2 ENSGALG00000005667 12689 0.872 - - - - - - - 0.872 - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
62. AKAP1 ENSGALG00000005575 12051 0.871 - - - - - - 0.871 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
63. THYN1 ENSGALG00000001529 9423 0.871 - - - - - - - 0.871 - - thymocyte nuclear protein 1 [Source:NCBI gene;Acc:374161]
64. TERF2 ENSGALG00000000657 7865 0.869 - - - - - - 0.869 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
65. HARS ENSGALG00000035080 11602 0.868 - - - - - - 0.868 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
66. YWHAZ ENSGALG00000031387 84985 0.868 - - - - - - 0.868 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
67. PARP1 ENSGALG00000009228 39433 0.867 - - - - - - 0.867 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
68. MOSPD1 ENSGALG00000006132 8503 0.865 - - - - - - - 0.865 - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
69. IFRD1 ENSGALG00000009448 8865 0.863 - - - - - - 0.863 - - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
70. RNF166 ENSGALG00000007272 7154 0.863 - - - - - - - 0.863 - - ring finger protein 166 [Source:NCBI gene;Acc:425360]
71. CASK ENSGALG00000042400 8485 0.862 - - - - - - 0.862 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
72. RABGGTB ENSGALG00000011388 11654 0.861 - - - - - - 0.861 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
73. CDC23 ENSGALG00000007610 11945 0.861 - - - - - - 0.861 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
74. GLRX3 ENSGALG00000010464 22578 0.861 - - - - - - 0.861 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
75. RPF2 ENSGALG00000037087 12788 0.86 - - - - - - 0.860 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
76. ZNF593 ENSGALG00000000542 79105 0.86 - - - - - - 0.860 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
77. CDC45 ENSGALG00000001616 8432 0.86 - - - - - - 0.860 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
78. FCF1 ENSGALG00000010275 24928 0.859 - - - - - - 0.859 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
79. BSG ENSGALG00000001328 37947 0.858 - - - - - - 0.858 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
80. RANBP1 ENSGALG00000002107 17715 0.858 - - - - - - 0.858 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
81. NUP153 ENSGALG00000012720 8079 0.857 - - - - - - - 0.857 - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
82. NDUFA12 ENSGALG00000011325 19807 0.857 - - - - - - 0.857 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
83. LLPH ENSGALG00000019358 20976 0.857 - - - - - - 0.857 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
84. ENSGALG00000017396 ENSGALG00000017396 9028 0.856 - - - - - - 0.856 - - -
85. PPP1R2 ENSGALG00000029789 11594 0.856 - - - - - - 0.856 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
86. HERC2 ENSGALG00000016739 9900 0.856 - - - - - - 0.856 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
87. SEC13 ENSGALG00000008419 18388 0.854 - - - - - - - 0.854 - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
88. CCNH ENSGALG00000015641 8051 0.854 - - - - - - 0.854 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
89. WDR43 ENSGALG00000032529 12235 0.852 - - - - - - 0.852 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
90. GABARAPL2 ENSGALG00000003208 9195 0.852 - - - - - - 0.852 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
91. KIF2C ENSGALG00000010120 8999 0.851 - - - - - - 0.851 - - - kinesin family member 2C, transcript variant X1
92. PSMB2 ENSGALG00000026421 51885 0.85 - - - - - - 0.850 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
93. GPC4 ENSGALG00000006080 56498 0.85 - - - - - - 0.850 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
94. VBP1 VBP1 14482 0.85 - - - - - - 0.850 - - -
95. SIVA1 ENSGALG00000011619 15130 0.849 - - - - - - 0.849 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
96. ATG3 ENSGALG00000015204 11277 0.849 - - - - - - 0.849 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
97. NASP ENSGALG00000010255 28423 0.849 - - - - - - 0.849 - - - nuclear autoantigenic sperm protein, transcript variant X3
98. MRPL20 ENSGALG00000001542 28764 0.849 - - - - - - 0.849 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
99. TXNDC17 ENSGALG00000027950 45004 0.848 - - - - - - 0.848 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
100. MAP3K7 ENSGALG00000015596 15164 0.848 - - - - - - 0.848 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]

There are 838 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA