Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KHSRP

Gene Name Gene ID Reads Annotation
KHSRP ENSG00000088247 13538 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]



Genes with expression patterns similar to KHSRP

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. KHSRP ENSG00000088247 13538 2 1.000 1.000 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
2. TRIM28 ENSG00000130726 33518 0.872 - 0.872 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]
3. HSP90AB1 ENSG00000096384 183977 0.858 - 0.858 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
4. DNMT1 ENSG00000130816 23001 0.848 - 0.848 DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]
5. SF1 ENSG00000168066 32785 0.842 - 0.842 splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:12950]
6. SMARCA4 ENSG00000127616 21398 0.838 - 0.838 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
7. CTDNEP1 ENSG00000175826 15483 0.833 - 0.833 CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:19085]
8. SKI ENSG00000157933 7837 0.831 - 0.831 SKI proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10896]
9. CPSF7 ENSG00000149532 16261 0.83 - 0.830 cleavage and polyadenylation specific factor 7 [Source:HGNC Symbol;Acc:HGNC:30098]
10. SNRNP70 ENSG00000104852 14118 0.828 - 0.828 small nuclear ribonucleoprotein U1 subunit 70 [Source:HGNC Symbol;Acc:HGNC:11150]
11. UBE2C ENSG00000175063 19631 0.825 - 0.825 ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
12. USP22 ENSG00000124422 49599 0.822 - 0.822 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
13. TACC3 ENSG00000013810 8753 0.817 - 0.817 transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]
14. HNRNPUL1 ENSG00000105323 23988 0.817 - 0.817 heterogeneous nuclear ribonucleoprotein U like 1 [Source:HGNC Symbol;Acc:HGNC:17011]
15. UBA1 ENSG00000130985 20298 0.814 - 0.814 ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
16. PIK3R2 ENSG00000105647 8036 0.802 - 0.802 phosphoinositide-3-kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:8980]
17. CSK ENSG00000103653 5441 0.802 - 0.802 C-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]
18. CS ENSG00000062485 8243 0.802 - 0.802 citrate synthase [Source:HGNC Symbol;Acc:HGNC:2422]
19. ARHGDIA ENSG00000141522 3661 0.798 - 0.798 Rho GDP dissociation inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:678]
20. MARCKSL1 ENSG00000175130 73054 0.796 - 0.796 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
21. TAF6 ENSG00000106290 8475 0.795 - 0.795 TATA-box binding protein associated factor 6 [Source:HGNC Symbol;Acc:HGNC:11540]
22. SAFB ENSG00000160633 7035 0.794 - 0.794 scaffold attachment factor B [Source:HGNC Symbol;Acc:HGNC:10520]
23. EEF2 ENSG00000167658 47680 0.791 - 0.791 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
24. USP11 ENSG00000102226 8177 0.79 - 0.790 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]
25. SIX5 ENSG00000177045 8285 0.789 - 0.789 SIX homeobox 5 [Source:HGNC Symbol;Acc:HGNC:10891]
26. U2AF2 ENSG00000063244 19476 0.786 - 0.786 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:HGNC:23156]
27. SMARCC2 ENSG00000139613 11165 0.785 - 0.785 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [Source:HGNC Symbol;Acc:HGNC:11105]
28. TNKS1BP1 ENSG00000149115 3681 0.785 - 0.785 tankyrase 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19081]
29. CTXN1 ENSG00000178531 6094 0.785 - 0.785 cortexin 1 [Source:HGNC Symbol;Acc:HGNC:31108]
30. ATP5SL 25967 0.785 - 0.785 ATP5S like, transcript variant X1
31. EHMT2 ENSG00000204371, ENSG00000206376, ENSG00000224143, ENSG00000227333, ENSG00000232045, ENSG00000236759, ENSG00000238134 6990 0.784 - 0.784 euchromatic histone lysine methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:14129]
32. DCTN1 ENSG00000204843 19815 0.78 - 0.780 dynactin subunit 1 [Source:HGNC Symbol;Acc:HGNC:2711]
33. FASN ENSG00000169710 19582 0.78 - 0.780 fatty acid synthase [Source:HGNC Symbol;Acc:HGNC:3594]
34. CFL1 ENSG00000172757 100783 0.78 - 0.780 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
35. ASF1B ENSG00000105011 6283 0.775 - 0.775 anti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]
36. NUP62 ENSG00000213024 9838 0.774 - 0.774 nucleoporin 62 [Source:HGNC Symbol;Acc:HGNC:8066]
37. FSCN1 ENSG00000075618 34169 0.773 - 0.773 fascin actin-bundling protein 1 [Source:HGNC Symbol;Acc:HGNC:11148]
38. HCFC1 ENSG00000172534 21012 0.773 - 0.773 host cell factor C1 [Source:HGNC Symbol;Acc:HGNC:4839]
39. TTI1 ENSG00000101407 4394 0.772 - 0.772 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
40. STRN4 ENSG00000090372 7212 0.772 - 0.772 striatin 4 [Source:HGNC Symbol;Acc:HGNC:15721]
41. BAHCC1 ENSG00000266074 3120 0.772 - 0.772 BAH domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29279]
42. CDIP1 ENSG00000089486, ENSG00000274336 2346 0.771 - 0.771 cell death inducing p53 target 1 [Source:HGNC Symbol;Acc:HGNC:13234]
43. CBX2 ENSG00000173894 9548 0.771 - 0.771 chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]
44. MLF2 ENSG00000089693 18042 0.77 - 0.770 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:HGNC:7126]
45. AURKB ENSG00000178999 25157 0.77 - 0.770 aurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]
46. ATP6V0C ENSG00000185883 26903 0.769 - 0.769 ATPase H+ transporting V0 subunit c [Source:HGNC Symbol;Acc:HGNC:855]
47. GIGYF1 ENSG00000146830 2356 0.768 - 0.768 GRB10 interacting GYF protein 1 [Source:HGNC Symbol;Acc:HGNC:9126]
48. FAM213B 13531 0.768 - 0.768 family with sequence similarity 213 member B, transcript variant X4
49. PELP1 ENSG00000141456 2409 0.767 - 0.767 proline, glutamate and leucine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:30134]
50. TCF3 ENSG00000071564 8880 0.767 - 0.767 transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11633]
51. HDGF ENSG00000143321 18626 0.765 - 0.765 heparin binding growth factor [Source:HGNC Symbol;Acc:HGNC:4856]
52. PITPNA ENSG00000174238 6829 0.765 - 0.765 phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
53. PLK1 ENSG00000166851 4839 0.762 - 0.762 polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]
54. MED24 ENSG00000008838 7251 0.76 - 0.760 mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]
55. MKI67 ENSG00000148773 12368 0.759 - 0.759 marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]
56. PPDPF ENSG00000125534 12552 0.759 - 0.759 pancreatic progenitor cell differentiation and proliferation factor [Source:HGNC Symbol;Acc:HGNC:16142]
57. DLGAP4 ENSG00000080845 6521 0.757 - 0.757 DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
58. NOP9 ENSG00000196943, ENSG00000285326 4741 0.755 - 0.755 NOP9 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:19826]
59. DBN1 ENSG00000113758 12842 0.754 - 0.754 drebrin 1 [Source:HGNC Symbol;Acc:HGNC:2695]
60. GLTSCR1 2311 0.754 - 0.754 glioma tumor suppressor candidate region gene 1, transcript variant X3
61. DVL3 ENSG00000161202 5984 0.753 - 0.753 dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
62. TUBA1C ENSG00000167553 11023 0.753 - 0.753 tubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]
63. PRKCSH ENSG00000130175 2117 0.753 - 0.753 protein kinase C substrate 80K-H [Source:HGNC Symbol;Acc:HGNC:9411]
64. NELFA ENSG00000185049 4150 0.753 - 0.753 negative elongation factor complex member A [Source:HGNC Symbol;Acc:HGNC:12768]
65. H1FX ENSG00000184897 16213 0.752 - 0.752 H1 histone family member X [Source:HGNC Symbol;Acc:HGNC:4722]
66. SNRPA ENSG00000077312 4577 0.752 - 0.752 small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
67. REEP4 ENSG00000168476 2419 0.752 - 0.752 receptor accessory protein 4 [Source:HGNC Symbol;Acc:HGNC:26176]
68. EWSR1 ENSG00000182944 14507 0.752 - 0.752 EWS RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3508]
69. TERF2 ENSG00000132604 14503 0.752 - 0.752 telomeric repeat binding factor 2 [Source:HGNC Symbol;Acc:HGNC:11729]
70. STK25 ENSG00000115694 6833 0.75 - 0.750 serine/threonine kinase 25 [Source:HGNC Symbol;Acc:HGNC:11404]
71. EIF2AK1 ENSG00000086232 14202 0.749 - 0.749 eukaryotic translation initiation factor 2 alpha kinase 1 [Source:HGNC Symbol;Acc:HGNC:24921]
72. SMARCD1 ENSG00000066117 5983 0.749 - 0.749 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:HGNC:11106]
73. MOB3A ENSG00000172081 2616 0.749 - 0.749 MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
74. UBAP2L ENSG00000143569 11810 0.748 - 0.748 ubiquitin associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:29877]
75. UBE2I ENSG00000103275 13271 0.747 - 0.747 ubiquitin conjugating enzyme E2 I [Source:HGNC Symbol;Acc:HGNC:12485]
76. SSBP3 ENSG00000157216 27480 0.747 - 0.747 single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:15674]
77. OTUB1 ENSG00000167770 22747 0.745 - 0.745 OTU deubiquitinase, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:HGNC:23077]
78. ATP6V0A1 ENSG00000033627 1866 0.744 - 0.744 ATPase H+ transporting V0 subunit a1 [Source:HGNC Symbol;Acc:HGNC:865]
79. EFS ENSG00000100842 2924 0.744 - 0.744 embryonal Fyn-associated substrate [Source:HGNC Symbol;Acc:HGNC:16898]
80. GPS2 ENSG00000132522 22685 0.743 - 0.743 G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:HGNC:4550]
81. PACS2 ENSG00000179364 3440 0.743 - 0.743 phosphofurin acidic cluster sorting protein 2 [Source:HGNC Symbol;Acc:HGNC:23794]
82. ILF3 ENSG00000129351 19056 0.742 - 0.742 interleukin enhancer binding factor 3 [Source:HGNC Symbol;Acc:HGNC:6038]
83. CKAP5 ENSG00000175216 7463 0.741 - 0.741 cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]
84. NRM ENSG00000137404, ENSG00000206484, ENSG00000228854, ENSG00000228867, ENSG00000234809, ENSG00000235773, ENSG00000236843 7767 0.741 - 0.741 nurim [Source:HGNC Symbol;Acc:HGNC:8003]
85. FAM127B 11371 0.74 - 0.740 family with sequence similarity 127 member B, transcript variant 2
86. RHBDD2 ENSG00000005486 6577 0.739 - 0.739 rhomboid domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23082]
87. CIZ1 ENSG00000148337 3149 0.739 - 0.739 CDKN1A interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:16744]
88. PRPF8 ENSG00000174231, ENSG00000274442 8190 0.737 - 0.737 pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
89. REPIN1 ENSG00000214022 4516 0.736 - 0.736 replication initiator 1 [Source:HGNC Symbol;Acc:HGNC:17922]
90. AAAS ENSG00000094914 7598 0.735 - 0.735 aladin WD repeat nucleoporin [Source:HGNC Symbol;Acc:HGNC:13666]
91. SF3B3 ENSG00000189091 8156 0.735 - 0.735 splicing factor 3b subunit 3 [Source:HGNC Symbol;Acc:HGNC:10770]
92. ISYNA1 ENSG00000105655 4796 0.733 - 0.733 inositol-3-phosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:29821]
93. RBM8A ENSG00000265241 18888 0.733 - 0.733 RNA binding motif protein 8A [Source:HGNC Symbol;Acc:HGNC:9905]
94. HNRNPAB ENSG00000197451 34938 0.733 - 0.733 heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]
95. CBS ENSG00000160200 15678 0.732 - 0.732 cystathionine-beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
96. TROAP ENSG00000135451 5590 0.73 - 0.730 trophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]
97. CALM3 ENSG00000160014 17997 0.726 - 0.726 calmodulin 3 [Source:HGNC Symbol;Acc:HGNC:1449]
98. NCAPH2 ENSG00000025770 5066 0.725 - 0.725 non-SMC condensin II complex subunit H2 [Source:HGNC Symbol;Acc:HGNC:25071]
99. NUMA1 ENSG00000137497 1406 0.725 - 0.725 nuclear mitotic apparatus protein 1 [Source:HGNC Symbol;Acc:HGNC:8059]
100. IP6K1 ENSG00000176095 2194 0.724 - 0.724 inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]

There are 51 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA