Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for KHDRBS3

Gene Name Gene ID Reads Annotation
KHDRBS3 ENSDARG00000101020 408 KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]










Genes with expression patterns similar to KHDRBS3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. KHDRBS3 ENSDARG00000101020 408 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
2. slco5a1 slco5a1 383 2.521 - - - - - - 0.789 0.948 0.784
3. adrbk2 1037 2.463 - - - 0.849 0.896 0.718 - - - adrenergic, beta, receptor kinase 2, transcript variant X1
4. C16H8orf76 C16H8orf76 329 1.875 - - - - - 0.966 - 0.909 -
5. rlbp1a ENSDARG00000012504 111 1.857 - - - - 0.950 - - 0.907 - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
6. si:dkeyp-46h3.2 ENSDARG00000092498 23 1.835 - 0.875 - - - 0.960 - - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
7. bag5 ENSDARG00000017316 195 1.817 - - - - - 0.921 - 0.896 - BCL2 associated athanogene 5 [Source:ZFIN;Acc:ZDB-GENE-050913-58]
8. fam86a fam86a 174 1.797 - - - - - 0.896 - 0.901 -
9. si:dkey-30j10.5 ENSDARG00000093186 13 1.793 - 0.830 - - - 0.963 - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
10. CABZ01066717.1 CABZ01066717.1 351 1.766 - - - - - 0.850 - 0.916 -
11. ACBD3 ENSDARG00000042623 159 1.755 - - - 0.819 0.936 - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
12. rapgef5a ENSDARG00000075271 282 1.749 - - - - 0.941 - - - 0.808 Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
13. SLC27A3 SLC27A3 240 1.738 - - - - 0.907 0.831 - - -
14. si:dkey-1f1.4 si:dkey-1f1.4 105 1.734 - - - - - 0.938 - - 0.796
15. dixdc1a ENSDARG00000025302 716 1.734 - - - - - - 0.804 0.930 - DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
16. CR450842.1 CR450842.1 129 1.727 - - - - 0.926 0.801 - - -
17. CABZ01117079.1 CABZ01117079.1 123 1.726 - 0.821 - - - 0.905 - - -
18. si:dkey-242h9.3 ENSDARG00000069189 83 1.725 - 0.819 - - - 0.906 - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
19. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.722 - - - - 0.942 - - - 0.780 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
20. zgc:162200 ENSDARG00000079934 1225 1.721 - 0.848 - - - - - 0.873 - zgc:162200 [Source:ZFIN;Acc:ZDB-GENE-030131-2989]
21. syt5b ENSDARG00000011640 70 1.719 - - - - - - - 0.893 0.826 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
22. hsd11b2 ENSDARG00000001975 245 1.713 - - - - - 0.917 - 0.796 - hydroxysteroid (11-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6030]
23. terf1 ENSDARG00000058710 317 1.71 - 0.808 - - 0.902 - - - - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
24. tradd ENSDARG00000036057, ENSDARG00000117083 1583 1.708 - - - - - 0.856 - 0.852 - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
25. slc30a4 ENSDARG00000007180 158 1.7 - - - - 0.774 0.926 - - - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
26. sh3bp4a ENSDARG00000020000 1049 1.699 - - - - - 0.843 - 0.856 - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]
27. st6galnac1.1 ENSDARG00000043814 95 1.692 - - - - - 0.960 - - 0.732 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
28. si:ch211-209a2.1 250 1.69 - 0.865 - 0.825 - - - - - si:ch211-209a2.1, transcript variant X2
29. ENSDARG00000089986 ENSDARG00000089986 308 1.684 0.784 - - - - - - 0.900 -
30. ogfr ENSDARG00000037837 1001 1.681 - - - - - - 0.767 0.914 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
31. clcn5 clcn5 492 1.677 - - - - 0.815 0.862 - - -
32. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 1.676 - - - - 0.887 - - - 0.789 stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
33. tgm5l ENSDARG00000098837 174 1.675 - - - 0.739 0.936 - - - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
34. ENGASE ENSDARG00000010035 232 1.674 - - - 0.777 - - - 0.897 - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
35. btd ENSDARG00000099596 88 1.673 - 0.828 - - - 0.845 - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
36. armc1l ENSDARG00000020887 1219 1.67 - - - - 0.843 0.827 - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
37. dnttip2 ENSDARG00000057648 2381 1.67 - - - - - 0.761 - 0.909 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
38. FBLN1 ENSDARG00000103311 877 1.669 - - - 0.824 - 0.845 - - - fibulin 1 [Source:NCBI gene;Acc:30240]
39. ccdc94 1417 1.664 - - - - - 0.776 - 0.888 - coiled-coil domain containing 94
40. zic5 ENSDARG00000016022 1034 1.664 - - - - - - - 0.868 0.796 zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
41. gnat2 ENSDARG00000042529 112 1.662 - - - - - - - 0.891 0.771 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
42. ly75 ENSDARG00000053113 196 1.655 - - - 0.731 0.924 - - - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
43. elovl4b ENSDARG00000027495 107 1.654 - - - - - - - 0.838 0.816 ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
44. zc3h10 ENSDARG00000030335 236 1.653 - 0.812 - - - - - - 0.841 zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
45. mpzl2b ENSDARG00000027345, ENSDARG00000113465 575 1.652 - - - - 0.789 - - 0.863 - myelin protein zero-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8774]
46. dna2 ENSDARG00000078759 846 1.652 - - - - 0.731 - - 0.921 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
47. grhl2a ENSDARG00000058342 153 1.651 - - - - - 0.946 0.705 - - grainyhead-like transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-050913-123]
48. spryd3 ENSDARG00000101982 666 1.645 - 0.882 - - - 0.763 - - - SPRY domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070928-22]
49. CABZ01066772.1 CABZ01066772.1 299 1.645 - - - - - 0.748 - 0.897 -
50. rab14_1 ENSDARG00000074246 481 1.637 - - - 0.843 0.794 - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
51. si:dkey-16p19.5 ENSDARG00000092583 284 1.634 - - - - - 0.853 - - 0.781 si:dkey-16p19.5 [Source:ZFIN;Acc:ZDB-GENE-120709-69]
52. inaa ENSDARG00000011862 115 1.634 - - - - - - - 0.887 0.747 internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
53. gstm3 gstm3 1164 1.633 - - - - 0.928 - - 0.705 -
54. slc25a39 ENSDARG00000007449 630 1.631 - - - - - 0.780 - 0.851 - solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
55. C17H15orf41 C17H15orf41 313 1.631 - - - 0.812 - 0.819 - - -
56. slc35b1 ENSDARG00000038213 465 1.629 - 0.795 - - - - - - 0.834 solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
57. nmnat1 ENSDARG00000105748 102 1.628 - - - 0.791 - 0.837 - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
58. manf ENSDARG00000063177, ENSDARG00000114083 570 1.627 - 0.852 - - - - - - 0.775 mesencephalic astrocyte-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-060929-640]
59. zgc:158856 zgc:158856 23 1.623 - 0.825 - - - - - - 0.798
60. rabggta ENSDARG00000061024 332 1.621 - - - - - 0.795 - - 0.826 Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
61. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.62 - - - 0.731 - - - 0.889 - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
62. UNC119 UNC119 104 1.617 - - - - - - - 0.827 0.790
63. prkrira 971 1.612 - - - - - 0.859 0.753 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
64. vhl ENSDARG00000070617 663 1.612 0.717 - - - - - - 0.895 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
65. PEX5L PEX5L 179 1.61 - - - 0.893 - - 0.717 - -
66. cdan1 ENSDARG00000042261 658 1.61 - 0.712 - - - - - 0.898 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
67. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.61 - 0.830 - - - - - - 0.780 multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
68. arhgef28 ENSDARG00000060415 142 1.607 - - - 0.854 - 0.753 - - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
69. tsnax ENSDARG00000115282 99 1.603 - - - 0.800 - - - - 0.803 translin-associated factor X [Source:ZFIN;Acc:ZDB-GENE-050913-80]
70. pias1b ENSDARG00000062445 538 1.602 - - - - 0.752 - - 0.850 - protein inhibitor of activated STAT, 1b [Source:ZFIN;Acc:ZDB-GENE-050419-202]
71. CUTA CUTA 1149 1.601 - - - - 0.847 - - 0.754 -
72. ddx27 ENSDARG00000091831 1471 1.599 - - - - - 0.769 - 0.830 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
73. bscl2 ENSDARG00000037008 429 1.597 - - - 0.801 - - - 0.796 - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
74. zgc:101566 ENSDARG00000086342 363 1.597 - - - 0.805 - - - - 0.792 zgc:101566 [Source:ZFIN;Acc:ZDB-GENE-041010-73]
75. znf410 ENSDARG00000008218 1807 1.596 - - - - - 0.784 - 0.812 - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
76. pole ENSDARG00000058533, ENSDARG00000115430 381 1.596 - - - 0.735 - - - 0.861 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
77. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.59 - - - - - - - 0.799 0.791 asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
78. chsy3 ENSDARG00000069472 271 1.584 - - - - - 0.720 - 0.864 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
79. si:dkey-3h2.4 ENSDARG00000086179, ENSDARG00000098444 88 1.582 - - - 0.777 0.805 - - - - si:dkey-3h2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-466]
80. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.581 - - - 0.795 - - - - 0.786 zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
81. si:dkey-118k5.3 ENSDARG00000087736 155 1.58 - 0.816 - - - 0.764 - - - si:dkey-118k5.3 [Source:ZFIN;Acc:ZDB-GENE-121214-294]
82. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.578 - 0.804 - 0.774 - - - - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
83. si:ch211-229l10.12 si:ch211-229l10.12 95 1.578 - 0.830 - - - - 0.748 - -
84. syt1a ENSDARG00000030614 542 1.576 - - - - - - - 0.802 0.774 synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
85. dhrs13a.2 ENSDARG00000111240 491 1.565 - - - 0.792 0.773 - - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
86. WNT7A WNT7A 320 1.562 0.702 - - - - 0.860 - - -
87. cbx3b ENSDARG00000092158 1976 1.562 - 0.825 - - 0.737 - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
88. rab15 ENSDARG00000026484 326 1.561 0.753 - - - - 0.808 - - - RAB15, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-2]
89. znf438 ENSDARG00000061311 524 1.559 - - - 0.815 - 0.744 - - - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
90. dhrs9 ENSDARG00000019260 250 1.556 - - - - - 0.854 - - 0.702 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
91. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1.552 - - - - - - - 0.798 0.754 nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
92. gpc1a ENSDARG00000019341, ENSDARG00000110513 935 1.55 - - - - 0.770 - - 0.780 - glypican 1a [Source:ZFIN;Acc:ZDB-GENE-051120-147]
93. osbpl11 ENSDARG00000076328 195 1.545 - 0.760 - - - - - - 0.785 oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
94. CLDND1 CLDND1 155 1.539 - 0.717 - - - - - - 0.822
95. suz12a ENSDARG00000070256 2229 1.537 - 0.756 - - 0.781 - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
96. BX005272.1 BX005272.1 553 1.536 - - - 0.801 - 0.735 - - -
97. CDR2 CDR2 384 1.53 - - - - - - 0.768 - 0.762
98. larp1 ENSDARG00000101722 976 1.529 - - - - - 0.793 0.736 - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
99. hsf2 ENSDARG00000053097 1188 1.528 - 0.774 - - - - - 0.754 - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
100. plagx ENSDARG00000036855 3768 1.526 - - - - - - 0.718 0.808 - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]

There are 2156 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA