Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KHDRBS1

Gene Name Gene ID Reads Annotation
KHDRBS1 ENSGALG00000003272 4249 KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]











Genes with expression patterns similar to KHDRBS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KHDRBS1 ENSGALG00000003272 4249 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
2. SMARCC1 ENSGALG00000032642 4842 1.884 - - - - - - - 0.971 - 0.913 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
3. ITGA9 ENSGALG00000029378 415 1.883 - - - - - - - 0.964 - 0.919 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
4. SMC6 ENSGALG00000016467 3321 1.867 - - - - - - - 0.961 - 0.906 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
5. CKAP2 ENSGALG00000017025 25020 1.833 - - - - - - - 0.948 - 0.885 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
6. MTERFD1 MTERFD1 3640 1.816 - - - - - - - 0.950 - 0.866
7. MED24 ENSGALG00000013506 5403 1.803 - - - - - - - 0.909 - 0.894 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
8. TXNDC5 ENSGALG00000012784 4678 1.799 - - - - - - - 0.946 - 0.853 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
9. ASB9 ENSGALG00000016563 2780 1.775 - - - - - - - 0.867 - 0.908 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
10. CAMSAP2 ENSGALG00000002145 6109 1.766 - - - - - - - 0.937 - 0.829 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
11. TRMT44 ENSGALG00000015594 1490 1.717 - - - - - - 0.745 0.972 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
12. EFTUD2 ENSGALG00000000988 17913 1.67 - - - - - - - 0.873 - 0.797 elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
13. ZNF326 ENSGALG00000006113 15141 1.638 - - - - - - - 0.850 - 0.788 zinc finger protein 326 [Source:NCBI gene;Acc:424512]
14. SPG21 ENSGALG00000007262 8050 1.596 - - - - - - - 0.801 - 0.795 SPG21, maspardin [Source:NCBI gene;Acc:415526]
15. TCEA2 ENSGALG00000005976 9143 1.593 - - - - - - 0.783 - - 0.810 transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
16. MED28 ENSGALG00000007138 7686 1.589 - - - - - - 0.791 0.798 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
17. LSM6 ENSGALG00000009985 18582 1.556 - - - - - - 0.731 - - 0.825 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
18. FBXO5 ENSGALG00000013607 6156 1.552 - - - - - - 0.734 - - 0.818 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
19. HNRNPD ENSGALG00000011184 10686 1.537 - - - - - - - 0.807 - 0.730 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
20. GTF2A2 ENSGALG00000003793 5957 1.526 - - - - - - 0.710 0.816 - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
21. RALGAPB ENSGALG00000001420 5112 1.504 - - - - - - - 0.790 - 0.714 Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
22. ROMO1 ENSGALG00000027416 9560 1.458 - - - - - - 0.749 - - 0.709 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
23. MLX ENSGALG00000003199 5286 1.439 - - - - - - 0.702 - - 0.737 MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
24. TCEA1 ENSGALG00000015274 2706 0.983 - - - - - - - 0.983 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
25. gga-mir-1772 ENSGALG00000025300 2892 0.981 - - - - - - - 0.981 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
26. DCTN5 ENSGALG00000006088 3113 0.981 - - - - - - - 0.981 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
27. DNAJA1 ENSGALG00000023066 3820 0.978 - - - - - - - 0.978 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
28. DUSP14 ENSGALG00000027641 3662 0.978 - - - - - - - 0.978 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
29. MTMR9 ENSGALG00000016649 2055 0.978 - - - - - - - 0.978 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
30. SRP72 ENSGALG00000011403 13666 0.976 - - - - - - - 0.976 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
31. PNISR ENSGALG00000015483 7711 0.975 - - - - - - - 0.975 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
32. NSRP1 ENSGALG00000004186 1683 0.974 - - - - - - - 0.974 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
33. AMMECR1L ENSGALG00000026728 2134 0.973 - - - - - - - 0.973 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
34. BTG1L ENSGALG00000004676 2293 0.973 - - - - - - - 0.973 - - protein BTG1-like
35. PYCR1 ENSGALG00000007300 7987 0.973 - - - - - - - 0.973 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
36. ARRDC4 ENSGALG00000007012 1039 0.972 - - - - - - - 0.972 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
37. ACSL1 ENSGALG00000010628 2560 0.971 - - - - - - - 0.971 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
38. PKP4 ENSGALG00000012561 3087 0.971 - - - - - - - 0.971 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
39. CARS2 ENSGALG00000016847 3814 0.971 - - - - - - - 0.971 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
40. NR2F2 ENSGALG00000007000 4911 0.971 - - - - - - - 0.971 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
41. BRCC3 ENSGALG00000005383 4844 0.97 - - - - - - - 0.970 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
42. H3-I H3-I 1498 0.97 - - - - - - - 0.970 - -
43. CC2D2A ENSGALG00000014514 1180 0.97 - - - - - - - 0.970 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
44. PEO1 PEO1 6747 0.97 - - - - - - - 0.970 - -
45. ADIPOR1 ENSGALG00000000094 1862 0.97 - - - - - - - 0.970 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
46. RNF214 ENSGALG00000036993 3729 0.97 - - - - - - - 0.970 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
47. MAST2 ENSGALG00000010313 2975 0.969 - - - - - - - 0.969 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
48. REV3L ENSGALG00000015033 1917 0.969 - - - - - - - 0.969 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
49. HDGFL2 ENSGALG00000027068 1300 0.969 - - - - - - - 0.969 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
50. UCK2 ENSGALG00000003510 2512 0.968 - - - - - - - 0.968 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
51. STX18 ENSGALG00000015012 1489 0.968 - - - - - - - 0.968 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
52. C7orf25 ENSGALG00000040161 694 0.968 - - - - - - - 0.968 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
53. REXO1 ENSGALG00000001043 3179 0.968 - - - - - - - 0.968 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
54. INOS INOS 313 0.968 - - - - - - - 0.968 - -
55. RGS17 ENSGALG00000026034 707 0.968 - - - - - - - 0.968 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
56. KDM4A ENSGALG00000010074 7219 0.968 - - - - - - - 0.968 - - lysine demethylase 4A
57. PPCS ENSGALG00000004882 5759 0.968 - - - - - - - 0.968 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
58. VGLL4 ENSGALG00000004937 3762 0.967 - - - - - - - 0.967 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
59. NEMF ENSGALG00000012263 2250 0.967 - - - - - - - 0.967 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
60. ENSGALG00000014190 ENSGALG00000014190 5735 0.967 - - - - - - - 0.967 - -
61. TFEB ENSGALG00000039878 881 0.967 - - - - - - - 0.967 - - transcription factor EB [Source:NCBI gene;Acc:419922]
62. ABCA3 ENSGALG00000037837 1606 0.967 - - - - - - - 0.967 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
63. SLC25A1 ENSGALG00000041760 4744 0.967 - - - - - - - 0.967 - - solute carrier family 25 member 1, transcript variant X2
64. GTDC1 ENSGALG00000012424 1446 0.967 - - - - - - - 0.967 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
65. TMEM59 ENSGALG00000010746 4669 0.966 - - - - - - - 0.966 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
66. ALG9 ENSGALG00000021174 745 0.966 - - - - - - - 0.966 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
67. GOLGB1 ENSGALG00000041494 2376 0.966 - - - - - - - 0.966 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
68. LIG3 ENSGALG00000002288 7198 0.965 - - - - - - - 0.965 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
69. DEPDC7 ENSGALG00000011681 1181 0.965 - - - - - - - 0.965 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
70. APOOL ENSGALG00000006978 1953 0.965 - - - - - - - 0.965 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
71. FGF18 ENSGALG00000002203 551 0.965 - - - - - - - 0.965 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
72. PHLPP1 ENSGALG00000012888 398 0.965 - - - - - - - 0.965 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
73. TMEM57 ENSGALG00000001067 3367 0.965 - - - - - - - 0.965 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
74. RP9 ENSGALG00000035453 1186 0.964 - - - - - - - 0.964 - - retinitis pigmentosa 9 (autosomal dominant)
75. C5orf24 ENSGALG00000006371 1573 0.964 - - - - - - - 0.964 - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
76. CHAF1A ENSGALG00000001126 6506 0.964 - - - - - - - 0.964 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
77. TRPC6 ENSGALG00000029416 281 0.963 - - - - - - - 0.963 - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
78. IRX1 ENSGALG00000030991 1474 0.963 - - - - - - - 0.963 - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
79. RGS9 ENSGALG00000029610 112 0.962 - - - - - - - 0.962 - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
80. ATP8B4 ENSGALG00000002326 456 0.962 - - - - - - - 0.962 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
81. METTL22 ENSGALG00000033603 696 0.962 - - - - - - - 0.962 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
82. ZC3H3 ENSGALG00000043265 1638 0.962 - - - - - - - 0.962 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
83. TRIM24 ENSGALG00000012823 2725 0.962 - - - - - - - 0.962 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
84. LATS2 4776 0.962 - - - - - - - 0.962 - - large tumor suppressor kinase 2
85. SMIM12 ENSGALG00000030261 5860 0.961 - - - - - - - 0.961 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
86. NET1 ENSGALG00000008437 9850 0.961 - - - - - - - 0.961 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
87. NGEF ENSGALG00000036327 1048 0.961 - - - - - - - 0.961 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
88. FGFR1OP ENSGALG00000011423 2418 0.96 - - - - - - - 0.960 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
89. CHMP6 ENSGALG00000026428 18026 0.96 - - - - - - - 0.960 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
90. MYH15 ENSGALG00000015358 6304 0.96 - - - - - - - 0.960 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
91. FIGN ENSGALG00000011069 311 0.96 - - - - - - - 0.960 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
92. RDM1 ENSGALG00000000243 3388 0.958 - - - - - - - 0.958 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
93. NUP210L 370 0.956 - - - - - - - 0.956 - - nucleoporin 210 like
94. ARHGEF4 ENSGALG00000002193 558 0.955 - - - - - - - 0.955 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
95. CEP170 ENSGALG00000010733 4177 0.954 - - - - - - - 0.954 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
96. TUBAL3 ENSGALG00000008444 2979 0.954 - - - - - - - 0.954 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
97. ARFRP1 ENSGALG00000006101 3743 0.953 - - - - - - - 0.953 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
98. ENSGALG00000003150 ENSGALG00000003150 10001 0.95 - - - - - - - 0.950 - -
99. VCAN ENSGALG00000015624 11489 0.95 - - - - - - - 0.950 - - versican [Source:NCBI gene;Acc:395565]
100. gga-mir-1306 ENSGALG00000025271 1231 0.947 - - - - - - - 0.947 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]

There are 645 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA