Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM4C

Gene Name Gene ID Reads Annotation
KDM4C ENSGALG00000020557 145 lysine demethylase 4C [Source:HGNC Symbol;Acc:HGNC:17071]











Genes with expression patterns similar to KDM4C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM4C ENSGALG00000020557 145 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 lysine demethylase 4C [Source:HGNC Symbol;Acc:HGNC:17071]
2. P2RY12 ENSGALG00000036470 20 0.939 - - - - - 0.939 - - - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
3. TNR ENSGALG00000004526 6 0.906 - - - - - 0.906 - - - - tenascin R [Source:NCBI gene;Acc:396213]
4. LICOS LICOS 13 0.858 - - - - - 0.858 - - - -
5. VT4 VT4 9 0.816 - - - - - 0.816 - - - -
6. CABP2 ENSGALG00000037497 329 0.812 - - - - - 0.812 - - - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
7. ENSGALG00000023027 ENSGALG00000023027 5 0.803 - - - - - 0.803 - - - -
8. TTC28 ENSGALG00000005676 36 0.803 - - - - - 0.803 - - - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
9. FIP1L1 ENSGALG00000013943 15 0.803 - - - - - 0.803 - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
10. Six3os1 Six3os1 1 0.803 - - - - - 0.803 - - - -
11. ENSGALG00000021375 ENSGALG00000021375 1 0.803 - - - - - 0.803 - - - -
12. SLC30A1 ENSGALG00000009858 5 0.803 - - - - - 0.803 - - - - solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
13. HAPLN4 ENSGALG00000026563 9 0.803 - - - - - 0.803 - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
14. EDNRB2 ENSGALG00000007466 1 0.803 - - - - - 0.803 - - - - endothelin receptor B subtype 2 [Source:NCBI gene;Acc:373909]
15. SYT15 ENSGALG00000002046 3 0.803 - - - - - 0.803 - - - - synaptotagmin 15, transcript variant X1
16. ENSGALG00000020819 ENSGALG00000020819 2 0.803 - - - - - 0.803 - - - -
17. RASSF6 ENSGALG00000011664 7 0.803 - - - - - 0.803 - - - - Ras association domain family member 6 [Source:HGNC Symbol;Acc:HGNC:20796]
18. ENSGALG00000018528 ENSGALG00000018528 1 0.803 - - - - - 0.803 - - - -
19. KLHL1 ENSGALG00000016907 21 0.803 - - - - - 0.803 - - - - kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
20. LFABP LFABP 5 0.803 - - - - - 0.803 - - - -
21. ESAM ENSGALG00000032943 1 0.803 - - - - - 0.803 - - - - endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:17474]
22. ENSGALG00000026341 ENSGALG00000026341 1 0.803 - - - - - 0.803 - - - -
23. CNGA3 ENSGALG00000039826 3 0.803 - - - - - 0.803 - - - - cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
24. LDLRAD3 ENSGALG00000038913 4 0.803 - - - - - 0.803 - - - - low density lipoprotein receptor class A domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27046]
25. PTPN23 ENSGALG00000038522 93 0.803 - - - - - 0.803 - - - - protein tyrosine phosphatase, non-receptor type 23 [Source:HGNC Symbol;Acc:HGNC:14406]
26. TRAIL-LIKE ENSGALG00000007240 8 0.803 - - - - - 0.803 - - - - TNF-related apoptosis inducing ligand-like [Source:NCBI gene;Acc:395283]
27. NKX2-5 ENSGALG00000002886 81 0.803 - - - - - 0.803 - - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
28. FXYD2 ENSGALG00000007320 168 0.803 - - - - - 0.803 - - - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
29. RBM47 ENSGALG00000014267 6 0.803 - - - - - 0.803 - - - - RNA binding motif protein 47 [Source:HGNC Symbol;Acc:HGNC:30358]
30. GGT5 ENSGALG00000040504 24 0.803 - - - - - 0.803 - - - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
31. gga-mir-6579-2 ENSGALG00000035346 7 0.803 - - - - - 0.803 - - - - gga-mir-6579-2 [Source:miRBase;Acc:MI0022398]
32. GPR114 GPR114 46 0.803 - - - - - 0.803 - - - -
33. SPTBN5 395 0.803 - - - - - 0.803 - - - - spectrin beta, non-erythrocytic 5
34. LAPTM4B ENSGALG00000045196 520 0.8 - - - - - 0.800 - - - - lysosomal protein transmembrane 4 beta [Source:HGNC Symbol;Acc:HGNC:13646]
35. JDP2 ENSGALG00000010322 11 0.791 - - 0.791 - - - - - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
36. EFCAB12 EFCAB12 15 0.784 - - - - - 0.784 - - - -
37. RECQL5 ENSGALG00000002424 16 0.781 - - - - - 0.781 - - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
38. CMTR2 ENSGALG00000002356 3 0.781 - - - - - 0.781 - - - - cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]
39. FZD1 ENSGALG00000009064 76 0.774 - - - - - 0.774 - - - - frizzled class receptor 1 [Source:NCBI gene;Acc:374062]
40. ENSGALG00000010590 ENSGALG00000010590 6 0.772 - - 0.772 - - - - - - -
41. TP63 ENSGALG00000007324 6 0.772 - - 0.772 - - - - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
42. ENSGALG00000013079 ENSGALG00000013079 12 0.772 - - 0.772 - - - - - - -
43. EPHB1 ENSGALG00000006609 346 0.772 - - - - - - - 0.772 - - EPH receptor B1, transcript variant X2
44. SH3TC2 2 0.772 - - 0.772 - - - - - - - SH3 domain and tetratricopeptide repeats 2
45. NFATC2 ENSGALG00000007963 15 0.772 - - 0.772 - - - - - - - nuclear factor of activated T cells 2 [Source:HGNC Symbol;Acc:HGNC:7776]
46. CDH6 ENSGALG00000012917 17 0.772 - - 0.772 - - - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
47. ENSGALG00000021824 ENSGALG00000021824 6 0.772 - - 0.772 - - - - - - -
48. NEIL2 ENSGALG00000016664 4 0.772 - - 0.772 - - - - - - - nei like DNA glycosylase 2 [Source:NCBI gene;Acc:422037]
49. UROC1 ENSGALG00000006306 75 0.772 - - - - - 0.772 - - - - urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
50. LYG2 ENSGALG00000016761 7 0.772 - - 0.772 - - - - - - - lysozyme g2 [Source:NCBI gene;Acc:395708]
51. ENSGALG00000002367 ENSGALG00000002367 10 0.772 - - 0.772 - - - - - - -
52. STAR ENSGALG00000003242 4 0.772 - - 0.772 - - - - - - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
53. TMEM248 ENSGALG00000033954 248 0.766 - - 0.766 - - - - - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
54. AMPD1 ENSGALG00000002082 228 0.765 - - - - - 0.765 - - - - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
55. UNK ENSGALG00000002278 55 0.763 - - - - - 0.763 - - - - unkempt family zinc finger [Source:HGNC Symbol;Acc:HGNC:29369]
56. STK32A ENSGALG00000029195 27 0.757 - - 0.757 - - - - - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
57. ENSGALG00000027170 ENSGALG00000027170 6 0.755 - - - - - 0.755 - - - -
58. MYO1D ENSGALG00000000674 14 0.752 - - - - - 0.752 - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
59. RIBC2 ENSGALG00000014232 13 0.752 - - - - - 0.752 - - - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
60. APOB ENSGALG00000016491 34 0.751 - - 0.751 - - - - - - - apolipoprotein B [Source:NCBI gene;Acc:396535]
61. ZMYM4 ENSGALG00000002499 435 0.748 - - 0.748 - - - - - - - zinc finger MYM-type containing 4, transcript variant X1
62. TNFRSF19 ENSGALG00000017119 25 0.746 - - 0.746 - - - - - - - TNF receptor superfamily member 19 [Source:NCBI gene;Acc:418943]
63. ZDHHC3 ENSGALG00000029266 11 0.746 - - 0.746 - - - - - - - zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
64. TNIP2 ENSGALG00000015666 28 0.744 - - - - - 0.744 - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
65. PRPF19 ENSGALG00000040048 168 0.742 - - 0.742 - - - - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
66. CKV1.1 CKV1.1 140 0.741 - - 0.741 - - - - - - -
67. FTO ENSGALG00000041036 11 0.74 - - 0.740 - - - - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
68. CEP97 ENSGALG00000015342 1117 0.738 - - - - - 0.738 - - - - centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]
69. MBTPS2 ENSGALG00000016382 259 0.738 - - - - - 0.738 - - - - membrane bound transcription factor peptidase, site 2 [Source:HGNC Symbol;Acc:HGNC:15455]
70. CLDN20 ENSGALG00000027634 25 0.734 - - 0.734 - - - - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
71. EFR3B ENSGALG00000016605 234 0.732 - - - - - 0.732 - - - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
72. FEM1C ENSGALG00000008204 9 0.726 - - - - 0.726 - - - - - fem-1 homolog C [Source:HGNC Symbol;Acc:HGNC:16933]
73. IL2RB ENSGALG00000012472 7 0.726 - - - - 0.726 - - - - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
74. NRP2 ENSGALG00000008621 29 0.726 - - - - 0.726 - - - - - neuropilin 2 [Source:NCBI gene;Acc:374157]
75. PDXDC1 ENSGALG00000034829 406 0.726 - - 0.726 - - - - - - - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
76. NPDC1 ENSGALG00000042635 12 0.726 - - - - 0.726 - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
77. LOC100858777 ENSGALG00000027624 58 0.725 - - - - - - - 0.725 - - rhodopsin, GQ-coupled-like
78. ZBTB41 ENSGALG00000002305 97 0.724 - - 0.724 - - - - - - - zinc finger and BTB domain containing 41, transcript variant X2
79. ANKH ENSGALG00000012964 273 0.724 - - 0.724 - - - - - - - ANKH inorganic pyrophosphate transport regulator [Source:NCBI gene;Acc:420917]
80. TTLL2 ENSGALG00000011344 14 0.723 - - 0.723 - - - - - - - tubulin tyrosine ligase like 2, transcript variant X1
81. CEP170B ENSGALG00000011639 71 0.723 - - - - - 0.723 - - - - centrosomal protein 170B, transcript variant X13
82. PLCXD3 ENSGALG00000014845 247 0.72 - - 0.720 - - - - - - - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
83. RHOF ENSGALG00000039724 8 0.718 - - 0.718 - - - - - - - ras homolog family member F, filopodia associated [Source:NCBI gene;Acc:416848]
84. SMG7 ENSGALG00000004667 707 0.717 - - - - - 0.717 - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
85. HPS6 ENSGALG00000020741 4 0.714 - - - - - 0.714 - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
86. THBS2 ENSGALG00000011200 35 0.713 - - - - - 0.713 - - - - thrombospondin 2 [Source:NCBI gene;Acc:414837]
87. TMEM206 ENSGALG00000009822 80 0.711 - - - - - 0.711 - - - - transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
88. MMEL1 ENSGALG00000001115 46 0.711 - - 0.711 - - - - - - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
89. GTPBP6 ENSGALG00000016717 17 0.71 - - - - - 0.710 - - - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
90. MRAS ENSGALG00000011592 1264 0.708 - - 0.708 - - - - - - - muscle RAS oncogene homolog [Source:NCBI gene;Acc:395149]
91. IL13RA1 ENSGALG00000044480 24 0.707 - - 0.707 - - - - - - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
92. GBP ENSGALG00000026152 38 0.706 - - - - - 0.706 - - - - Gallus gallus guanylate binding protein (GBP), mRNA. [Source:RefSeq mRNA;Acc:NM_204652]
93. ACOX2 ENSGALG00000007132 47 0.706 - - - - 0.706 - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
94. AMH ENSGALG00000036346 16 0.704 - - - - 0.704 - - - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
95. MFHAS1 ENSGALG00000011444 7 0.704 - - 0.704 - - - - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
96. SLC22A16 ENSGALG00000015055 21 0.703 - - 0.703 - - - - - - - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA