Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM4C

Gene Name Gene ID Reads Annotation
KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]










Genes with expression patterns similar to KDM4C

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
2. pkib ENSDARG00000053110 527 2.311 - 0.839 - - - 0.719 0.753 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
3. napg napg 645 2.184 0.712 0.763 - - - - 0.709 - -
4. CABZ01084569.1 CABZ01084569.1 650 1.725 - - - - - 0.968 0.757 - -
5. espl1 ENSDARG00000075354 818 1.705 - - - - - 0.818 0.887 - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
6. nfatc3b ENSDARG00000051729 239 1.669 - 0.875 - - - 0.794 - - - nuclear factor of activated T cells 3b [Source:ZFIN;Acc:ZDB-GENE-100922-25]
7. mapk8ip2 ENSDARG00000063157 467 1.664 - - - 0.902 - 0.762 - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
8. ppp6r2b ENSDARG00000069654 323 1.653 - 0.825 - - - 0.828 - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
9. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 1.644 - - - - - 0.786 0.858 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
10. heca ENSDARG00000042877 200 1.638 - - - 0.747 0.891 - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
11. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 1.63 - - - - - 0.878 0.752 - - actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
12. adamtsl7 ENSDARG00000055439 575 1.629 - 0.810 - - - 0.819 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
13. ubxn6 ENSDARG00000003087, ENSDARG00000113404 431 1.629 0.788 - - - - 0.841 - - - UBX domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5680]
14. ube3a ENSDARG00000055737 1874 1.621 - 0.793 - - - 0.828 - - - ubiquitin protein ligase E3A [Source:ZFIN;Acc:ZDB-GENE-041114-190]
15. BX004890.2 BX004890.2 84 1.617 - 0.808 - - - 0.809 - - -
16. pld3 ENSDARG00000068199 205 1.607 - - - - - 0.867 0.740 - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
17. nsmce4a ENSDARG00000024311 125 1.604 - - - - 0.864 - 0.740 - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
18. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 1.6 - - - - 0.836 0.764 - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
19. ildr2 ENSDARG00000014180 791 1.599 - - - - - 0.753 0.846 - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
20. SMC6 ENSDARG00000091821 165 1.596 - - - - 0.828 - 0.768 - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
21. arhgap19 ENSDARG00000083189 210 1.594 - 0.839 - - - - 0.755 - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
22. samd1b ENSDARG00000079062 280 1.582 - 0.748 - - - 0.834 - - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
23. kif19 ENSDARG00000053026 124 1.577 0.850 - - - - 0.727 - - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
24. si:ch211-288d18.1 ENSDARG00000011088 255 1.57 - - - 0.736 - 0.834 - - - si:ch211-288d18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-323]
25. lamb2l ENSDARG00000033950 952 1.568 - 0.850 - - - - 0.718 - - laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
26. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.567 - - - - 0.731 0.836 - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
27. deptor ENSDARG00000040930 191 1.564 - - - 0.708 0.856 - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
28. cx34.4 ENSDARG00000075854 168 1.563 - - - - 0.770 0.793 - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
29. si:dkey-161j23.5 ENSDARG00000094441 11 1.561 0.729 0.832 - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
30. VWA7 ENSDARG00000061462 816 1.558 0.775 - - - - 0.783 - - - von Willebrand factor A domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060503-234]
31. mkrn2 ENSDARG00000007630 127 1.554 - - - - 0.817 0.737 - - - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
32. ck2b ck2b 781 1.554 - 0.851 - - - - 0.703 - -
33. CELF6 ENSDARG00000101933 228 1.553 - - - - 0.815 0.738 - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
34. usp22 ENSDARG00000040407 398 1.55 - - - - 0.747 0.803 - - - ubiquitin specific peptidase 22 [Source:ZFIN;Acc:ZDB-GENE-060512-211]
35. hcfc1b ENSDARG00000012519 3633 1.547 - - - - - 0.748 0.799 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
36. ppp1r15a ENSDARG00000069135 871 1.542 - - - - - 0.828 0.714 - - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
37. si:dkey-3h2.4 ENSDARG00000086179, ENSDARG00000098444 88 1.54 - - - - 0.706 - 0.834 - - si:dkey-3h2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-466]
38. si:ch211-223a21.3 ENSDARG00000104737 28 1.539 0.729 0.810 - - - - - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
39. ntf7 ntf7 72 1.539 0.729 0.810 - - - - - - -
40. TMEM150A_1 TMEM150A_1 90 1.538 0.719 - - - 0.819 - - - -
41. BX649494.1 BX649494.1 195 1.537 - 0.737 - - - 0.800 - - -
42. SENP2 ENSDARG00000073837 1411 1.534 - - - - 0.732 0.802 - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
43. ttc27 ENSDARG00000007918 1228 1.533 - - - - - 0.730 0.803 - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
44. si:ch211-220f16.2 ENSDARG00000007976 638 1.533 - - - 0.800 - 0.733 - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
45. nfyba ENSDARG00000039185 1804 1.531 - - - - - 0.729 0.802 - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
46. AL929204.1 AL929204.1 773 1.531 - - - - - 0.807 0.724 - -
47. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.528 - 0.736 - - - 0.792 - - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
48. iah1 ENSDARG00000015765 326 1.528 - 0.758 - - - 0.770 - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
49. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.524 - 0.822 - - - 0.702 - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
50. rpp25l ENSDARG00000070131 492 1.523 - 0.737 - - 0.786 - - - - ribonuclease P/MRP 25 subunit-like [Source:ZFIN;Acc:ZDB-GENE-040718-275]
51. UBL7 UBL7 197 1.522 - - - - - 0.821 0.701 - -
52. AREL1 ENSDARG00000100359 260 1.521 - - - 0.718 0.803 - - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
53. PCYOX1L ENSDARG00000069003 420 1.52 - 0.782 - - 0.738 - - - - prenylcysteine oxidase 1 like [Source:ZFIN;Acc:ZDB-GENE-141212-302]
54. CABZ01038514.1 CABZ01038514.1 724 1.514 - 0.778 - - - 0.736 - - -
55. CNST CNST 540 1.512 - - - 0.769 - - 0.743 - -
56. unc119a ENSDARG00000034453 244 1.512 0.772 - - - - 0.740 - - - unc-119 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090930-2]
57. smg5 ENSDARG00000041481 1286 1.51 - 0.761 - - - - 0.749 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
58. sbf2 ENSDARG00000059460 311 1.509 - 0.805 - - - 0.704 - - - SET binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-030911-10]
59. tamm41 ENSDARG00000100157 1116 1.506 0.784 - - - - - 0.722 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
60. epb41a ENSDARG00000099283 860 1.503 0.703 0.800 - - - - - - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
61. sfi1 ENSDARG00000053992 1075 1.503 0.758 0.745 - - - - - - - SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
62. TESK1 TESK1 109 1.502 - 0.784 - - - 0.718 - - -
63. b3galt2 ENSDARG00000102061, ENSDARG00000114032 216 1.5 0.754 - - - - 0.746 - - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2078]
64. med24 ENSDARG00000099431 893 1.498 - - - - - 0.730 0.768 - - mediator complex subunit 24 [Source:ZFIN;Acc:ZDB-GENE-030131-2341]
65. si:dkey-231k6.4 si:dkey-231k6.4 72 1.498 - - - - - 0.785 0.713 - -
66. stmn4 ENSDARG00000030106 518 1.495 - 0.759 - 0.736 - - - - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
67. si:ch211-250m6.8 si:ch211-250m6.8 51 1.49 0.711 - - 0.779 - - - - -
68. MAP4 MAP4 315 1.487 - - - - 0.738 - 0.749 - -
69. ubp1 ENSDARG00000018000 1047 1.486 - - - - - 0.764 0.722 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
70. slc25a23b ENSDARG00000024708 51 1.485 - - - - - 0.777 0.708 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
71. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.479 - 0.764 - - - - 0.715 - - patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
72. hdac4 ENSDARG00000098349 1370 1.478 - 0.745 - - 0.733 - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
73. USP31 ENSDARG00000074017 628 1.475 - - - - 0.766 0.709 - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
74. srpk1b ENSDARG00000031560 2079 1.474 - - - - - 0.738 0.736 - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
75. MDFI ENSDARG00000089564 8 1.474 0.729 0.745 - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
76. egln2 ENSDARG00000062562 2500 1.473 - - - - 0.726 - 0.747 - - egl-9 family hypoxia-inducible factor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-757]
77. rab14_1 ENSDARG00000074246 481 1.473 - - - - 0.711 0.762 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
78. atg4c ENSDARG00000044373 979 1.47 - 0.728 - - - 0.742 - - - autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
79. C8H1orf222 C8H1orf222 36 1.465 - 0.735 - - - - 0.730 - -
80. olfm1a ENSDARG00000018270 107 1.462 - - - - - 0.753 0.709 - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
81. cyb561d1 ENSDARG00000055295, ENSDARG00000114150 124 1.45 0.709 - - - - - 0.741 - - cytochrome b561 family, member D1 [Source:ZFIN;Acc:ZDB-GENE-040912-157]
82. CU693494.3 CU693494.3 169 1.448 - - - - 0.734 - 0.714 - -
83. C3H17orf53 C3H17orf53 191 1.447 - 0.730 - 0.717 - - - - -
84. camsap2 camsap2 1448 1.447 - 0.734 - - - - 0.713 - -
85. RGS9BP ENSDARG00000086756 65 1.444 0.729 - - - - 0.715 - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
86. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.443 - - - - - 0.742 0.701 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
87. siva1 ENSDARG00000114552 624 1.441 0.729 0.712 - - - - - - - SIVA1, apoptosis-inducing factor [Source:ZFIN;Acc:ZDB-GENE-050506-57]
88. nr1d4b ENSDARG00000059370 243 1.44 - - - - - 0.716 0.724 - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
89. prelid1b ENSDARG00000044169 501 1.439 0.723 - - - - 0.716 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
90. dnal1 ENSDARG00000034042 339 1.438 - - - 0.711 - 0.727 - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
91. TRIM65 ENSDARG00000077098 991 1.435 - 0.733 - 0.702 - - - - - tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
92. rnf113a ENSDARG00000037930 849 1.433 - 0.727 - - - 0.706 - - - ring finger protein 113A [Source:ZFIN;Acc:ZDB-GENE-040825-1]
93. DTX4 ENSDARG00000076302 2642 1.433 - - - - - 0.707 0.726 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
94. LPHN3 LPHN3 195 1.433 - 0.709 - - - 0.724 - - -
95. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 1.43 0.711 - - - - - 0.719 - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
96. MMADHC ENSDARG00000005870 212 1.428 - - - - 0.720 - 0.708 - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
97. prr18 ENSDARG00000093768 409 1.425 - 0.708 - 0.717 - - - - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
98. ank2b ENSDARG00000043313 3065 1.423 0.711 - - - - - 0.712 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
99. dcdc2b ENSDARG00000053744 181 1.418 - 0.704 - - - 0.714 - - - doublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
100. ptger1a ENSDARG00000078605 312 1.418 - 0.716 - - - 0.702 - - - prostaglandin E receptor 1a (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120215-261]

There are 1893 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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