Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for KDM4B

Gene Name Gene ID Reads Annotation
KDM4B ENSGALG00000034592 6711 lysine demethylase 4B, transcript variant X8











Genes with expression patterns similar to KDM4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM4B ENSGALG00000034592 6711 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine demethylase 4B, transcript variant X8
2. MIPEP ENSGALG00000017118 8666 1 - - - - - - 1.000 - - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
3. NUP188 ENSGALG00000043394 9288 1 - - - - - - 1.000 - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
4. IFT57 ENSGALG00000015356 5540 1 - - - - - - 1.000 - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
5. SMARCD2 ENSGALG00000029304 11867 0.999 - - - - - - 0.999 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
6. AP1G1 12403 0.999 - - - - - - 0.999 - - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
7. NUP133 ENSGALG00000011091 3804 0.999 - - - - - - 0.999 - - - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
8. SPAG1 ENSGALG00000033254 1370 0.999 - - - - - - 0.999 - - - sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
9. MAMDC2 ENSGALG00000015115 1512 0.999 - - - - - - 0.999 - - - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
10. ZNF384 ENSGALG00000032599 2369 0.999 - - - - - - 0.999 - - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
11. SLC12A4 ENSGALG00000034179 5674 0.999 - - - - - - 0.999 - - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
12. MEX3A ENSGALG00000014016 3692 0.999 - - - - - - 0.999 - - - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
13. ZNF367 ENSGALG00000012629 3215 0.999 - - - - - - 0.999 - - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
14. SP4 ENSGALG00000039454 5597 0.999 - - - - - - 0.999 - - - Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
15. AMFR ENSGALG00000003107 6560 0.999 - - - - - - 0.999 - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
16. SSR2 ENSGALG00000000764 32190 0.999 - - - - - - 0.999 - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
17. ANAPC2 ENSGALG00000008625 8822 0.999 - - - - - - 0.999 - - - anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
18. MSH6 ENSGALG00000008957 6396 0.999 - - - - - - 0.999 - - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
19. RWDD3 ENSGALG00000038421 10909 0.999 - - - - - - 0.999 - - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
20. NDUFS5 ENSGALG00000003625 27698 0.999 - - - - - - 0.999 - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
21. EMC1 ENSGALG00000003969 6876 0.999 - - - - - - 0.999 - - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
22. RNF126 ENSGALG00000042948 4724 0.999 - - - - - - 0.999 - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
23. HIBCH ENSGALG00000043307 11990 0.999 - - - - - - 0.999 - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
24. FBXL21 ENSGALG00000006327 2910 0.999 - - - - - - 0.999 - - - F-box and leucine rich repeat protein 21 [Source:NCBI gene;Acc:416306]
25. NUP153 ENSGALG00000012720 8079 0.998 - - - - - - 0.998 - - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
26. PSMD14 ENSGALG00000011128 13335 0.998 - - - - - - 0.998 - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
27. CDH3 5050 0.998 - - - - - - 0.998 - - - cadherin 3
28. OAZ2 ENSGALG00000036288 13213 0.998 - - - - - - 0.998 - - - Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
29. USP9X ENSGALG00000016236 9419 0.998 - - - - - - 0.998 - - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
30. PRIM2 ENSGALG00000016278 5160 0.998 - - - - - - 0.998 - - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
31. RBPMS_1 ENSGALG00000010291 16146 0.998 - - - - - - 0.998 - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
32. FAM174A ENSGALG00000026203 8369 0.997 - - - - - - 0.997 - - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
33. HOXB2 ENSGALG00000025774 5280 0.997 - - - - - - 0.997 - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
34. NTPCR ENSGALG00000011015 8652 0.997 - - - - - - 0.997 - - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
35. TCF21 ENSGALG00000029024 8252 0.997 - - - - - - 0.997 - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
36. BTBD1 ENSGALG00000006020 14157 0.996 - - - - - - 0.996 - - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
37. ACVR1 ENSGALG00000037301 6448 0.996 - - - - - - 0.996 - - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
38. SPC25 ENSGALG00000010900 14238 0.996 - - - - - - 0.996 - - - SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
39. NANS ENSGALG00000015320 10552 0.995 - - - - - - 0.995 - - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
40. MRPL21 ENSGALG00000004362 20796 0.995 - - - - - - 0.995 - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
41. HOXA4 ENSGALG00000022622 22327 0.99 - - - - - - 0.990 - - - homeobox A4 [Source:NCBI gene;Acc:395307]
42. KCTD9 ENSGALG00000000275 3455 0.988 - - - - - - - 0.988 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
43. H2AFY_1 ENSGALG00000040141 4895 0.988 - - - - - - - 0.988 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
44. VPS13B 2293 0.987 - - - - - - - 0.987 - - vacuolar protein sorting 13 homolog B
45. ADD1 ENSGALG00000015664 6828 0.987 - - - - - - - 0.987 - - adducin 1 [Source:NCBI gene;Acc:422882]
46. MTRF1 ENSGALG00000016951 3983 0.986 - - - - - - - 0.986 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
47. MAK16 ENSGALG00000001663 7455 0.986 - - - - - - - 0.986 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
48. NDUFB5 ENSGALG00000009076 32963 0.986 - - - - - - 0.986 - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
49. PTPN11 ENSGALG00000004821 2658 0.985 - - - - - - - 0.985 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
50. EED ENSGALG00000014060 6467 0.985 - - - - - - - 0.985 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
51. PGS1 ENSGALG00000007181 3187 0.985 - - - - - - - 0.985 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
52. RHOT1 ENSGALG00000003397 5149 0.985 - - - - - - - 0.985 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
53. PPT1 ENSGALG00000003936 2540 0.984 - - - - - - - 0.984 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
54. LIN7C ENSGALG00000012170 5043 0.984 - - - - - - - 0.984 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
55. DENND5B 4077 0.984 - - - - - - - 0.984 - - DENN domain containing 5B, transcript variant X1
56. KIAA1432 KIAA1432 1792 0.984 - - - - - - - 0.984 - -
57. ZC3H15 ENSGALG00000041857 19808 0.984 - - - - - - 0.984 - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
58. ACAP2 ENSGALG00000007040 4182 0.984 - - - - - - - 0.984 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
59. THG1L ENSGALG00000003722 7497 0.983 - - - - - - 0.983 - - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
60. CMC1 ENSGALG00000025811 3939 0.983 - - - - - - - 0.983 - - C-X9-C motif containing 1
61. DDHD1 ENSGALG00000012426 6068 0.983 - - - - - - - 0.983 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
62. KNOP1 ENSGALG00000002042 6251 0.983 - - - - - - - 0.983 - - lysine-rich nucleolar protein 1, transcript variant X1
63. VRK1 ENSGALG00000011116 4524 0.983 - - - - - - - 0.983 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
64. EPS15 ENSGALG00000010543 1598 0.983 - - - - - - - 0.983 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
65. ADARB1 ENSGALG00000007527 2480 0.982 - - - - - - - 0.982 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
66. MB21D1 2460 0.982 - - - - - - - 0.982 - - Mab-21 domain containing 1
67. NAA50 ENSGALG00000033889 3551 0.982 - - - - - - - 0.982 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
68. RIOK1 ENSGALG00000012795 4658 0.982 - - - - - - - 0.982 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
69. OMA1 ENSGALG00000010861 3328 0.982 - - - - - - - 0.982 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
70. RBM6 ENSGALG00000035578 1690 0.982 - - - - - - - 0.982 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
71. FGFRL1 ENSGALG00000037525 1687 0.982 - - - - - - - 0.982 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
72. MED10 ENSGALG00000028336 9343 0.981 - - - - - - - 0.981 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
73. PRORSD1P ENSGALG00000034854 2924 0.981 - - - - - - - 0.981 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
74. gga-mir-1787 ENSGALG00000025542 1373 0.981 - - - - - - - 0.981 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
75. ANKRD17 ENSGALG00000011642 3192 0.981 - - - - - - - 0.981 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
76. ERLIN2 ENSGALG00000003092 18251 0.98 - - - - - - 0.980 - - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
77. TECPR2 ENSGALG00000011373 1063 0.98 - - - - - - - 0.980 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
78. ENSGALG00000026930 ENSGALG00000026930 681 0.979 - - - - - - - 0.979 - -
79. QARS ENSGALG00000029980 4207 0.979 - - - - - - - 0.979 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
80. SNCAIP ENSGALG00000005330 2425 0.979 - - - - - - - 0.979 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
81. RPAP1 ENSGALG00000008624 3522 0.979 - - - - - - - 0.979 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
82. TMEM100 ENSGALG00000026465 1785 0.979 - - - - - - - 0.979 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
83. C3H2ORF43 C3H2ORF43 5628 0.979 - - - - - - - 0.979 - -
84. FBXW8 ENSGALG00000008207 1639 0.978 - - - - - - - 0.978 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
85. FAS ENSGALG00000006351 461 0.978 - - - - - - - 0.978 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
86. NFASC ENSGALG00000031776 4264 0.978 - - - - - - - 0.978 - - neurofascin [Source:NCBI gene;Acc:419824]
87. EIF3A ENSGALG00000009328 39982 0.977 - - - - - - 0.977 - - - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
88. PACSIN3 ENSGALG00000008231 5423 0.976 - - - - - - - 0.976 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
89. ZMYM4 ENSGALG00000002499 435 0.976 - - - - - - - 0.976 - - zinc finger MYM-type containing 4, transcript variant X1
90. DOCK8 481 0.976 - - - - - - - 0.976 - - dedicator of cytokinesis 8, transcript variant X1
91. PAX-6 PAX-6 2650 0.976 - - - - - - - 0.976 - -
92. AKAP12 ENSGALG00000036240 64617 0.975 - - - - - - 0.975 - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
93. PPP2CA ENSGALG00000006462 26306 0.971 - - - - - - 0.971 - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
94. FAM192A ENSGALG00000021473 10213 0.964 - - - - - - - 0.964 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
95. SNAPC5 ENSGALG00000007695 4117 0.963 - - - - - - - 0.963 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
96. UFD1L 12964 0.962 - - - - - - - 0.962 - - ubiquitin fusion degradation 1 like (yeast)
97. ERLIN1 ENSGALG00000003308 6427 0.961 - - - - - - - 0.961 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
98. APIP ENSGALG00000031286 6838 0.96 - - - - - - - 0.960 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
99. ACADSB ENSGALG00000041417 7710 0.959 - - - - - - - 0.959 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
100. LMNB2 ENSGALG00000000470 4364 0.957 - - - - - - - 0.957 - - lamin B2 [Source:NCBI gene;Acc:396222]

There are 73 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA