Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM4A

Gene Name Gene ID Reads Annotation
KDM4A ENSGALG00000010074 7219 lysine demethylase 4A











Genes with expression patterns similar to KDM4A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM4A ENSGALG00000010074 7219 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine demethylase 4A
2. CPQ ENSGALG00000030866 3962 1.839 - - - - - - 0.913 0.926 - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
3. DUSP14 ENSGALG00000027641 3662 1.835 - - - - - - 0.865 0.970 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
4. CAMSAP2 ENSGALG00000002145 6109 1.732 - - - - - - - 0.952 - 0.780 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
5. SMARCC1 ENSGALG00000032642 4842 1.706 - - - - - - - 0.971 - 0.735 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
6. RALGAPB ENSGALG00000001420 5112 1.665 - - - - - - 0.873 0.792 - - Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
7. RNF144A ENSGALG00000028709 2855 1.652 - - - - - - 0.709 0.943 - - ring finger protein 144A, transcript variant X1
8. EFTUD2 ENSGALG00000000988 17913 1.618 - - - - - - - 0.878 - 0.740 elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
9. CLN6 ENSGALG00000007981 5656 1.557 - - - - - - 0.709 0.848 - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
10. DKK3 ENSGALG00000005551 7807 1.524 - - - - - - 0.760 0.764 - - dickkopf WNT signaling pathway inhibitor 3 [Source:NCBI gene;Acc:396023]
11. PGD ENSGALG00000002797 15115 1.456 - - - - - - 0.751 - - 0.705 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
12. LIG3 ENSGALG00000002288 7198 0.979 - - - - - - - 0.979 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
13. PEO1 PEO1 6747 0.977 - - - - - - - 0.977 - -
14. TCEA1 ENSGALG00000015274 2706 0.976 - - - - - - - 0.976 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
15. gga-mir-1772 ENSGALG00000025300 2892 0.976 - - - - - - - 0.976 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
16. MAST2 ENSGALG00000010313 2975 0.975 - - - - - - - 0.975 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
17. DNAJA1 ENSGALG00000023066 3820 0.974 - - - - - - - 0.974 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
18. TXNDC5 ENSGALG00000012784 4678 0.973 - - - - - - - 0.973 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
19. CHAF1A ENSGALG00000001126 6506 0.972 - - - - - - - 0.972 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
20. CARS2 ENSGALG00000016847 3814 0.971 - - - - - - - 0.971 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
21. BTG1L ENSGALG00000004676 2293 0.971 - - - - - - - 0.971 - - protein BTG1-like
22. UCK2 ENSGALG00000003510 2512 0.971 - - - - - - - 0.971 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
23. NET1 ENSGALG00000008437 9850 0.971 - - - - - - - 0.971 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
24. TMEM59 ENSGALG00000010746 4669 0.97 - - - - - - - 0.970 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
25. RNF214 ENSGALG00000036993 3729 0.97 - - - - - - - 0.970 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
26. MTMR9 ENSGALG00000016649 2055 0.969 - - - - - - - 0.969 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
27. REV3L ENSGALG00000015033 1917 0.969 - - - - - - - 0.969 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
28. SLC25A1 ENSGALG00000041760 4744 0.969 - - - - - - - 0.969 - - solute carrier family 25 member 1, transcript variant X2
29. STX18 ENSGALG00000015012 1489 0.968 - - - - - - - 0.968 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
30. KHDRBS1 ENSGALG00000003272 4249 0.968 - - - - - - - 0.968 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
31. AMMECR1L ENSGALG00000026728 2134 0.968 - - - - - - - 0.968 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
32. CHMP6 ENSGALG00000026428 18026 0.968 - - - - - - - 0.968 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
33. REXO1 ENSGALG00000001043 3179 0.967 - - - - - - - 0.967 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
34. TRMT44 ENSGALG00000015594 1490 0.967 - - - - - - - 0.967 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
35. ZC3H3 ENSGALG00000043265 1638 0.967 - - - - - - - 0.967 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
36. PYCR1 ENSGALG00000007300 7987 0.967 - - - - - - - 0.967 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
37. SMIM12 ENSGALG00000030261 5860 0.966 - - - - - - - 0.966 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
38. TFEB ENSGALG00000039878 881 0.966 - - - - - - - 0.966 - - transcription factor EB [Source:NCBI gene;Acc:419922]
39. ARRDC4 ENSGALG00000007012 1039 0.966 - - - - - - - 0.966 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
40. TRIM24 ENSGALG00000012823 2725 0.965 - - - - - - - 0.965 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
41. RGS17 ENSGALG00000026034 707 0.965 - - - - - - - 0.965 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
42. CC2D2A ENSGALG00000014514 1180 0.964 - - - - - - - 0.964 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
43. PKP4 ENSGALG00000012561 3087 0.964 - - - - - - - 0.964 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
44. UBAC2 ENSGALG00000016880 1343 0.964 - - - - - - - 0.964 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
45. ADIPOR1 ENSGALG00000000094 1862 0.964 - - - - - - - 0.964 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
46. SRP72 ENSGALG00000011403 13666 0.964 - - - - - - - 0.964 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
47. C7orf25 ENSGALG00000040161 694 0.963 - - - - - - - 0.963 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
48. VGLL4 ENSGALG00000004937 3762 0.963 - - - - - - - 0.963 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
49. DCTN5 ENSGALG00000006088 3113 0.963 - - - - - - - 0.963 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
50. HDGFL2 ENSGALG00000027068 1300 0.963 - - - - - - - 0.963 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
51. GOLGB1 ENSGALG00000041494 2376 0.963 - - - - - - - 0.963 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
52. NSRP1 ENSGALG00000004186 1683 0.962 - - - - - - - 0.962 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
53. H3-I H3-I 1498 0.962 - - - - - - - 0.962 - -
54. DEPDC7 ENSGALG00000011681 1181 0.962 - - - - - - - 0.962 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
55. BRCC3 ENSGALG00000005383 4844 0.962 - - - - - - - 0.962 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
56. NGEF ENSGALG00000036327 1048 0.962 - - - - - - - 0.962 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
57. GTDC1 ENSGALG00000012424 1446 0.962 - - - - - - - 0.962 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
58. MYH15 ENSGALG00000015358 6304 0.962 - - - - - - - 0.962 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
59. INOS INOS 313 0.962 - - - - - - - 0.962 - -
60. EFHD1 ENSGALG00000001428 2831 0.962 - - - - - - - 0.962 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
61. ITGA9 ENSGALG00000029378 415 0.962 - - - - - - - 0.962 - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
62. EDEM1 ENSGALG00000008320 3117 0.961 - - - - - - - 0.961 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
63. ENSGALG00000014190 ENSGALG00000014190 5735 0.961 - - - - - - - 0.961 - -
64. APOOL ENSGALG00000006978 1953 0.961 - - - - - - - 0.961 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
65. RP9 ENSGALG00000035453 1186 0.96 - - - - - - - 0.960 - - retinitis pigmentosa 9 (autosomal dominant)
66. NEMF ENSGALG00000012263 2250 0.96 - - - - - - - 0.960 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
67. NR2F2 ENSGALG00000007000 4911 0.96 - - - - - - - 0.960 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
68. LATS2 4776 0.96 - - - - - - - 0.960 - - large tumor suppressor kinase 2
69. C5orf24 ENSGALG00000006371 1573 0.96 - - - - - - - 0.960 - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
70. MRPL18 ENSGALG00000011625 7855 0.959 - - - - - - - 0.959 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
71. ALG9 ENSGALG00000021174 745 0.959 - - - - - - - 0.959 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
72. PHLPP1 ENSGALG00000012888 398 0.959 - - - - - - - 0.959 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
73. MTERFD1 MTERFD1 3640 0.959 - - - - - - - 0.959 - -
74. GLG1 ENSGALG00000039818 6221 0.958 - - - - - - - 0.958 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
75. PNISR ENSGALG00000015483 7711 0.958 - - - - - - - 0.958 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
76. ABCA3 ENSGALG00000037837 1606 0.958 - - - - - - - 0.958 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
77. IRX1 ENSGALG00000030991 1474 0.958 - - - - - - - 0.958 - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
78. CCDC61 ENSGALG00000006714 8066 0.957 - - - - - - - 0.957 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
79. TRPC6 ENSGALG00000029416 281 0.957 - - - - - - - 0.957 - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
80. SNAP29 ENSGALG00000040128 3581 0.957 - - - - - - - 0.957 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
81. TMEM57 ENSGALG00000001067 3367 0.957 - - - - - - - 0.957 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
82. METTL22 ENSGALG00000033603 696 0.956 - - - - - - - 0.956 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
83. WASH1 WASH1 3240 0.956 - - - - - - - 0.956 - -
84. RGS9 ENSGALG00000029610 112 0.956 - - - - - - - 0.956 - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
85. ACSL1 ENSGALG00000010628 2560 0.956 - - - - - - - 0.956 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
86. ARFRP1 ENSGALG00000006101 3743 0.955 - - - - - - - 0.955 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
87. SMC6 ENSGALG00000016467 3321 0.954 - - - - - - - 0.954 - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
88. ATP8B4 ENSGALG00000002326 456 0.954 - - - - - - - 0.954 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
89. FIGN ENSGALG00000011069 311 0.954 - - - - - - - 0.954 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
90. gga-mir-1306 ENSGALG00000025271 1231 0.952 - - - - - - - 0.952 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
91. FGF18 ENSGALG00000002203 551 0.952 - - - - - - - 0.952 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
92. CHMP3 ENSGALG00000015805 11581 0.951 - - - - - - - 0.951 - - charged multivesicular body protein 3
93. TUBAL3 ENSGALG00000008444 2979 0.951 - - - - - - - 0.951 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
94. CKAP2 ENSGALG00000017025 25020 0.95 - - - - - - - 0.950 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
95. CEP170 ENSGALG00000010733 4177 0.949 - - - - - - - 0.949 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
96. FGFR1OP ENSGALG00000011423 2418 0.948 - - - - - - - 0.948 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
97. PPCS ENSGALG00000004882 5759 0.947 - - - - - - - 0.947 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
98. RDM1 ENSGALG00000000243 3388 0.947 - - - - - - - 0.947 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
99. PIGK ENSGALG00000009015 7942 0.947 - - - - - - - 0.947 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
100. FBXO33 ENSGALG00000010192 2917 0.946 - - - - - - - 0.946 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]

There are 321 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA