Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM3B

Gene Name Gene ID Reads Annotation
KDM3B ENSGALG00000007663 7189 lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]











Genes with expression patterns similar to KDM3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM3B ENSGALG00000007663 7189 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
2. KTN1 ENSGALG00000012137 4058 1.624 - - - - - - 0.788 0.836 - - kinectin 1 [Source:NCBI gene;Acc:396335]
3. WSB2 ENSGALG00000008151 13246 1.576 - - - - - - 0.846 0.730 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
4. INCENP ENSGALG00000007537 16617 1.546 - - - - - - 0.756 0.790 - - inner centromere protein [Source:NCBI gene;Acc:396270]
5. TMEM41A ENSGALG00000006649 3309 1.542 - - - - - - 0.739 0.803 - - transmembrane protein 41A [Source:NCBI gene;Acc:424875]
6. FAM18B1 ENSGALG00000001335 5177 1.537 - - - - - - 0.748 0.789 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
7. CCNC ENSGALG00000015471 6497 1.536 - - - - - - 0.771 0.765 - - cyclin C [Source:NCBI gene;Acc:421791]
8. STRN3 ENSGALG00000040464 9045 1.535 - - - - - - 0.706 0.829 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
9. AKT1 ENSGALG00000011620 4089 1.532 - - - - - - 0.745 0.787 - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
10. CENPK ENSGALG00000014753 12414 1.522 - - - - - - 0.773 0.749 - - centromere protein K [Source:NCBI gene;Acc:427162]
11. SASS6 ENSGALG00000005302 4029 1.513 - - - - - - 0.777 0.736 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
12. B4GALT6 ENSGALG00000015151 2770 1.512 - - - - - - 0.760 0.752 - - beta-1,4-galactosyltransferase 6 [Source:NCBI gene;Acc:421092]
13. RFC1 ENSGALG00000014298 6516 1.511 - - - - - - 0.748 0.763 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
14. TM4SF18 4553 1.504 - - - - - - 0.769 0.735 - - transmembrane 4 L six family member 18, transcript variant X2
15. ENSGALG00000007514 ENSGALG00000007514 4866 1.497 - - - - - - 0.730 0.767 - -
16. TIMM8A ENSGALG00000004963 14263 1.496 - - - - - - 0.781 0.715 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
17. DAD1 ENSGALG00000035626 32604 1.495 - - - - - - 0.770 0.725 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
18. BPNT1 ENSGALG00000009576 7445 1.493 - - - - - - 0.737 0.756 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
19. MRPL47 ENSGALG00000013759 9044 1.492 - - - - - - 0.763 0.729 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
20. ANAPC1 ENSGALG00000008254 2519 1.486 - - - - - - 0.766 0.720 - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
21. KLHL21 ENSGALG00000035211 6145 1.486 - - - - - - 0.752 0.734 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
22. GXYLT1 ENSGALG00000009532 5682 1.481 - - - - - - 0.768 0.713 - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
23. FAM63B 3793 1.48 - - - - - - 0.730 0.750 - - family with sequence similarity 63 member B
24. GNAI2 ENSGALG00000035645 9535 1.477 - - - - - - 0.729 0.748 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
25. CDK2AP1 ENSGALG00000034919 5469 1.475 - - - - - - 0.735 0.740 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
26. IFRD1 ENSGALG00000009448 8865 1.46 - - - - - - 0.736 0.724 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
27. CTSL2 CTSL2 7966 1.449 - - - - - - 0.716 0.733 - -
28. SNX7 ENSGALG00000005478 4736 1.444 - - - - - - 0.740 0.704 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
29. PPFIA1 ENSGALG00000035774 5258 1.442 - - - - - - 0.715 0.727 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
30. MPI ENSGALG00000029296 11781 1.441 - - - - - - 0.707 0.734 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
31. YRDC ENSGALG00000029001 6529 1.441 - - - - - - 0.712 0.729 - - yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
32. XBP1 ENSGALG00000005796 14007 1.441 - - - - - - 0.726 0.715 - - X-box binding protein 1 [Source:NCBI gene;Acc:416918]
33. TTC14 ENSGALG00000008889 3828 1.436 - - - - - - 0.730 0.706 - - tetratricopeptide repeat domain 14 [Source:NCBI gene;Acc:424970]
34. BNIP3L ENSGALG00000043405 10316 1.422 - - - - - - 0.718 0.704 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
35. MMGT1 ENSGALG00000027199 5854 1.406 - - - - - - 0.706 0.700 - - membrane magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:28100]
36. N-RAS N-RAS 5787 1.404 - - - - - - 0.701 0.703 - -
37. TPRKB ENSGALG00000013018 8687 0.888 - - - - - - 0.888 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
38. MRPL2 ENSGALG00000008597 16500 0.871 - - - - - - 0.871 - - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
39. HSPA4 ENSGALG00000040882 20966 0.866 - - - - - - 0.866 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
40. SIVA1 ENSGALG00000011619 15130 0.865 - - - - - - 0.865 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
41. FNBP1L ENSGALG00000005850 9219 0.865 - - - - - - 0.865 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
42. AHSA1 ENSGALG00000010463 15252 0.849 - - - - - - 0.849 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
43. SNRNP40 ENSGALG00000000615 32298 0.846 - - - - - - 0.846 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
44. TMEM30A ENSGALG00000015904 8533 0.846 - - - - - - 0.846 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
45. ERLIN2 ENSGALG00000003092 18251 0.846 - - - - - - - 0.846 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
46. CTDSPL2 ENSGALG00000008199 3534 0.838 - - - - - - - 0.838 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
47. HCCS ENSGALG00000005571 4939 0.838 - - - - - - 0.838 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
48. RUVBL1 ENSGALG00000005931 9379 0.837 - - - - - - 0.837 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
49. BIRC6 ENSGALG00000010541 7999 0.837 - - - - - - 0.837 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
50. MAP3K7 ENSGALG00000015596 15164 0.834 - - - - - - 0.834 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
51. MTA1 ENSGALG00000002803 11572 0.834 - - - - - - 0.834 - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
52. AZIN1 ENSGALG00000029295 11085 0.832 - - - - - - - 0.832 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
53. CASK ENSGALG00000042400 8485 0.831 - - - - - - 0.831 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
54. YIPF5 ENSGALG00000007404 5598 0.831 - - - - - - - 0.831 - - Yip1 domain family member 5 [Source:NCBI gene;Acc:416344]
55. ESF1 ENSGALG00000034768 8610 0.83 - - - - - - 0.830 - - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
56. FCF1 ENSGALG00000010275 24928 0.829 - - - - - - 0.829 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
57. RNPS1 ENSGALG00000009288 13588 0.829 - - - - - - 0.829 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
58. AKAP1 ENSGALG00000005575 12051 0.829 - - - - - - 0.829 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
59. XPO4 ENSGALG00000017132 2538 0.828 - - - - - - - 0.828 - - exportin 4 [Source:NCBI gene;Acc:428081]
60. TDP2 ENSGALG00000013637 6595 0.828 - - - - - - - 0.828 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
61. LSM5 ENSGALG00000041625 22307 0.828 - - - - - - 0.828 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
62. EIF2B1 ENSGALG00000003259 9491 0.826 - - - - - - 0.826 - - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
63. DPYSL2 ENSGALG00000000227 9668 0.826 - - - - - - 0.826 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
64. TXNDC17 ENSGALG00000027950 45004 0.825 - - - - - - 0.825 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
65. PFKL ENSGALG00000006543 4361 0.824 - - - - - - - 0.824 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
66. PPP1R2 ENSGALG00000029789 11594 0.822 - - - - - - 0.822 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
67. AP2A2 ENSGALG00000006799 13874 0.822 - - - - - - 0.822 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
68. PARP1 ENSGALG00000009228 39433 0.822 - - - - - - 0.822 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
69. NDUFA12 ENSGALG00000011325 19807 0.822 - - - - - - 0.822 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
70. MPPED1 ENSGALG00000014186 5726 0.821 - - - - - - 0.821 - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
71. MIB1 ENSGALG00000014974 3583 0.819 - - - - - - 0.819 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
72. NUP50 ENSGALG00000014222 11743 0.818 - - - - - - 0.818 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
73. RCN2 ENSGALG00000039284 17848 0.818 - - - - - - - 0.818 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
74. RBM7 ENSGALG00000007017 8779 0.818 - - - - - - 0.818 - - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
75. RRP1B ENSGALG00000035696 12309 0.814 - - - - - - 0.814 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
76. YWHAZ ENSGALG00000031387 84985 0.814 - - - - - - 0.814 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
77. ZNHIT3 ENSGALG00000026031 8652 0.814 - - - - - - 0.814 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
78. PGAM5 ENSGALG00000002137 7700 0.814 - - - - - - 0.814 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
79. CCDC12 ENSGALG00000005487 8190 0.813 - - - - - - 0.813 - - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
80. NEO1 ENSGALG00000001774 10165 0.813 - - - - - - 0.813 - - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
81. MED17 ENSGALG00000017218 5821 0.813 - - - - - - 0.813 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
82. CASP3 ENSGALG00000010638 11572 0.813 - - - - - - 0.813 - - - caspase 3 [Source:NCBI gene;Acc:395476]
83. TSTD1 TSTD1 3613 0.812 - - - - - - 0.812 - - -
84. KIF2C ENSGALG00000010120 8999 0.812 - - - - - - 0.812 - - - kinesin family member 2C, transcript variant X1
85. DCPS ENSGALG00000031143 10191 0.812 - - - - - - 0.812 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
86. DDX19B ENSGALG00000039967 49600 0.811 - - - - - - 0.811 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
87. IGBP1 ENSGALG00000044628 9200 0.811 - - - - - - 0.811 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
88. EIF4A2 ENSGALG00000008684 58507 0.811 - - - - - - 0.811 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
89. ENSGALG00000017396 ENSGALG00000017396 9028 0.811 - - - - - - 0.811 - - -
90. RANBP1 ENSGALG00000002107 17715 0.81 - - - - - - 0.810 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
91. ASUN ASUN 17129 0.81 - - - - - - 0.810 - - -
92. CDC40 ENSGALG00000015061 6118 0.81 - - - - - - 0.810 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
93. CLNS1A ENSGALG00000008574 25675 0.81 - - - - - - 0.810 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
94. PCM1 ENSGALG00000013602 6347 0.81 - - - - - - 0.810 - - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
95. DERL1 ENSGALG00000033950 15074 0.81 - - - - - - 0.810 - - - derlin 1 [Source:NCBI gene;Acc:420350]
96. CDC42BPB ENSGALG00000011432 8220 0.809 - - - - - - 0.809 - - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
97. GLI3 ENSGALG00000040266 9981 0.809 - - - - - - 0.809 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
98. SMC4 ENSGALG00000009553 15715 0.809 - - - - - - 0.809 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
99. DGCR2 ENSGALG00000005891 8405 0.808 - - - - - - 0.808 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
100. MSH2 ENSGALG00000008962 9709 0.808 - - - - - - - 0.808 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]

There are 658 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA