Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM3A

Gene Name Gene ID Reads Annotation
KDM3A ENSGALG00000015803 2729 lysine demethylase 3A [Source:NCBI gene;Acc:422917]











Genes with expression patterns similar to KDM3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM3A ENSGALG00000015803 2729 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine demethylase 3A [Source:NCBI gene;Acc:422917]
2. KIAA1143 ENSGALG00000035952 6735 1.447 - - - - - - - 0.725 - 0.722 KIAA1143 [Source:NCBI gene;Acc:420709]
3. NAPG ENSGALG00000013932 67 1.437 - - 0.712 - - - - - - 0.725 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
4. ICMT ENSGALG00000024053 10 0.83 - - 0.830 - - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
5. HIST1H111R ENSGALG00000011783 1513 0.825 - - - - - - - - - 0.825 histone cluster 1, H1.11R [Source:NCBI gene;Acc:427896]
6. CACNA1D ENSGALG00000005332 34 0.817 - - 0.817 - - - - - - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
7. POT1 ENSGALG00000008740 947 0.815 - - - - - - - - - 0.815 protection of telomeres 1 [Source:NCBI gene;Acc:404538]
8. FUK ENSGALG00000002648 9 0.812 - - 0.812 - - - - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
9. SCN4B ENSGALG00000007409 22 0.811 - - 0.811 - - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
10. ZP2 ENSGALG00000002428 10 0.811 - - 0.811 - - - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
11. LRIG1 ENSGALG00000007483 19 0.81 - - 0.810 - - - - - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
12. UIMC1 ENSGALG00000001158 22 0.81 - - 0.810 - - - - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
13. STX19 ENSGALG00000015413 28 0.809 - - 0.809 - - - - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
14. GATA4 ENSGALG00000016662 6 0.808 - - 0.808 - - - - - - - GATA binding protein 4 [Source:NCBI gene;Acc:396392]
15. VEPH1 ENSGALG00000009682 51 0.808 - - 0.808 - - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
16. FANCC ENSGALG00000012618 7002 0.808 - - 0.808 - - - - - - - FA complementation group C [Source:NCBI gene;Acc:427468]
17. DENND6B ENSGALG00000043771 22 0.808 - - 0.808 - - - - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
18. DLEC1 ENSGALG00000005826 23 0.806 - - 0.806 - - - - - - - DLEC1, cilia and flagella associated protein [Source:HGNC Symbol;Acc:HGNC:2899]
19. CKLF ENSGALG00000005254 3365 0.806 - - - - - - - - - 0.806 chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
20. TPTE2 ENSGALG00000017031 29 0.802 - - 0.802 - - - - - - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
21. CAPN6 ENSGALG00000008006 16 0.802 - - 0.802 - - - - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
22. PLA1A ENSGALG00000014997 152 0.801 - - 0.801 - - - - - - - phospholipase A1 member A [Source:HGNC Symbol;Acc:HGNC:17661]
23. TRAF3IP3 ENSGALG00000001373 11 0.801 - - 0.801 - - - - - - - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
24. ABCC13 ENSGALG00000015675 66 0.801 - - 0.801 - - - - - - - ATP binding cassette subfamily C member 13 (pseudogene), transcript variant X1
25. GARNL3 ENSGALG00000000847 3423 0.798 - - - - - - - 0.798 - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
26. EXOSC8 ENSGALG00000017048 2939 0.797 - - - - - - - - - 0.797 exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
27. KIAA1841 ENSGALG00000007825 22 0.797 - - 0.797 - - - - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
28. SP2 ENSGALG00000000233 43 0.793 - - 0.793 - - - - - - - Sp2 transcription factor [Source:HGNC Symbol;Acc:HGNC:11207]
29. FAM192A ENSGALG00000021473 10213 0.792 - - - - - - - - - 0.792 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
30. ZEB2 ENSGALG00000040465 315 0.79 - - - - - - - - - 0.790 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
31. CLIC3 ENSGALG00000038789 233 0.789 - - - - - - - - - 0.789 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
32. PLEKHA1 ENSGALG00000034548 34 0.788 - - 0.788 - - - - - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
33. TNN ENSGALG00000004538 21 0.788 - - - - - - - - - 0.788 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
34. TRAF-5 TRAF-5 102 0.788 - - - - - - - - - 0.788
35. KNDC1 ENSGALG00000007007 31 0.787 - - 0.787 - - - - - - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
36. SLC25A13 ENSGALG00000009728 8858 0.785 - - - - - - 0.785 - - - solute carrier family 25 member 13 [Source:NCBI gene;Acc:428427]
37. RYK ENSGALG00000006488 10533 0.784 - - - - - - - 0.784 - - receptor-like tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:10481]
38. FAM26E 37 0.784 - - 0.784 - - - - - - - family with sequence similarity 26 member E
39. C10H15ORF58 ENSGALG00000020921 81 0.783 - - 0.783 - - - - - - - chromosome 10 open reading frame, human C15orf58, transcript variant X7
40. CENPQ ENSGALG00000016692 293 0.782 - - 0.782 - - - - - - - centromere protein Q [Source:NCBI gene;Acc:422048]
41. C1orf168 C1orf168 98 0.78 - - 0.780 - - - - - - -
42. ENSGALG00000021386 ENSGALG00000021386 29 0.78 - - 0.780 - - - - - - -
43. PRKACB ENSGALG00000028530 12506 0.779 - - - - - - - 0.779 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
44. FADD ENSGALG00000007625 142 0.779 - - 0.779 - - - - - - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
45. PHF11 ENSGALG00000019094 770 0.777 - - - - - - - - - 0.777 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
46. VAC14 ENSGALG00000002458 2887 0.774 - - - - - - - - - 0.774 Vac14, PIKFYVE complex component [Source:NCBI gene;Acc:415678]
47. MYCN ENSGALG00000016462 1930 0.774 - - - - - - - - - 0.774 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
48. GPR157 ENSGALG00000002473 231 0.774 - - 0.774 - - - - - - - G protein-coupled receptor 157 [Source:HGNC Symbol;Acc:HGNC:23687]
49. LRRC45 ENSGALG00000002877 1751 0.773 - - - - - - 0.773 - - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
50. TRAK2 ENSGALG00000008370 46 0.773 - - - - - - - - - 0.773 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
51. PKD2 ENSGALG00000010921 55 0.772 - - - - - - - - - 0.772 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
52. TNFAIP3 ENSGALG00000013861 11 0.771 - - - - - - - - - 0.771 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
53. gga-mir-6544 ENSGALG00000027916 19 0.771 - - - - - - - - - 0.771 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
54. MVP ENSGALG00000040471 1407 0.771 - - - - - - - - - 0.771 major vault protein [Source:NCBI gene;Acc:420049]
55. NUBPL ENSGALG00000009983 3328 0.771 - - - - - - - 0.771 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
56. CR1L ENSGALG00000023950 98 0.771 - - 0.771 - - - - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
57. NME6 ENSGALG00000038044 1231 0.77 - - - - - - - - - 0.770 NME/NM23 nucleoside diphosphate kinase 6
58. BOK ENSGALG00000005772 117 0.77 - - - - - - - - - 0.770 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
59. KAT6B ENSGALG00000005035 301 0.77 - - - - - - - - - 0.770 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
60. SENP7 ENSGALG00000044642 48 0.769 - - - - - - - - - 0.769 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
61. SLC20A1 ENSGALG00000013740 40 0.768 - - - - - - - - - 0.768 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
62. KCNB1 ENSGALG00000004758 620 0.768 - - - - - - - - - 0.768 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
63. C3orf58 ENSGALG00000002347 27 0.768 - - - - - - - - - 0.768 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
64. MATR3 ENSGALG00000002478 12793 0.767 - - - - - - - - - 0.767 matrin 3 [Source:NCBI gene;Acc:373948]
65. AKAP11 ENSGALG00000022739 82 0.767 - - - - - - - - - 0.767 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
66. CRK ENSGALG00000002656 15 0.767 - - 0.767 - - - - - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
67. TMEM200B ENSGALG00000024318 117 0.767 - - - - - - - - - 0.767 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
68. TRMT61A ENSGALG00000011522 14 0.767 - - - - - - - - - 0.767 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
69. PTPN13 ENSGALG00000011078 62 0.767 - - 0.767 - - - - - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
70. NMBR ENSGALG00000013813 15 0.766 - - - - - - - - - 0.766 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
71. RABL2B ENSGALG00000032458 678 0.766 - - 0.766 - - - - - - - RAB, member of RAS oncogene family like 2B [Source:NCBI gene;Acc:426865]
72. OSBPL2 ENSGALG00000005195 94 0.766 - - - - - - - - - 0.766 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
73. MVK ENSGALG00000013848 239 0.766 - - 0.766 - - - - - - - mevalonate kinase [Source:HGNC Symbol;Acc:HGNC:7530]
74. UBAC1 ENSGALG00000042564 598 0.765 - - 0.765 - - - - - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
75. ZMYND10 ENSGALG00000035883 58 0.764 - - - - - - - - - 0.764 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
76. TBX5 ENSGALG00000008253 820 0.763 - - - - - - - - - 0.763 T-box 5 [Source:NCBI gene;Acc:373988]
77. TEX11 ENSGALG00000005775 58 0.763 - - 0.763 - - - - - - - testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
78. COQ5 ENSGALG00000007185 5614 0.762 - - - - - - - - - 0.762 coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
79. PHF14 ENSGALG00000038041 13687 0.762 - - - - - - - 0.762 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
80. PGS1 ENSGALG00000007181 3187 0.76 - - - - - - 0.760 - - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
81. CDCP1 ENSGALG00000040447 47 0.759 - - 0.759 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
82. MYH11 ENSGALG00000006520 166 0.757 - - - - - - - - - 0.757 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
83. SYNC ENSGALG00000003529 389 0.757 - - 0.757 - - - - - - - syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
84. CD34 ENSGALG00000001177 48 0.756 - - 0.756 - - - - - - - CD34 molecule, transcript variant X3
85. HDAC3 ENSGALG00000002634 130 0.756 - - 0.756 - - - - - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
86. CCDC171 ENSGALG00000015103 349 0.755 - - - - - - - - - 0.755 coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
87. MKRN1 ENSGALG00000012852 6907 0.753 - - - - - - - 0.753 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
88. ERRFI1 ENSGALG00000000535 83 0.753 - - - - - - - - - 0.753 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
89. REEP3 ENSGALG00000002904 130 0.752 - - - - - - - - - 0.752 receptor accessory protein 3 [Source:NCBI gene;Acc:423654]
90. TGFBRAP1 ENSGALG00000016795 81 0.752 - - - - - - - - - 0.752 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
91. FAM175B 3194 0.752 - - - - - - - - - 0.752 family with sequence similarity 175 member B, transcript variant X2
92. ERLIN2 ENSGALG00000003092 18251 0.752 - - - - - - - 0.752 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
93. TNFAIP2 ENSGALG00000011446 32 0.752 - - - - - - - - - 0.752 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
94. HBB HBB 7552 0.751 - - 0.751 - - - - - - -
95. WNK1 ENSGALG00000012992 67 0.751 - - 0.751 - - - - - - - WNK lysine deficient protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:14540]
96. ROGDI ENSGALG00000001841 313 0.751 - - - - - - - - - 0.751 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
97. CASK ENSGALG00000042400 8485 0.751 - - - - - - 0.751 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
98. ELMOD2 ENSGALG00000009836 177 0.75 - - 0.750 - - - - - - - ELMO domain containing 2 [Source:NCBI gene;Acc:422449]
99. GRID1 ENSGALG00000037366 159 0.75 - - 0.750 - - - - - - - glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]
100. LSM14B ENSGALG00000005125 31 0.75 - - 0.750 - - - - - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]

There are 147 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA