Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for KDM1A

Gene Name Gene ID Reads Annotation
KDM1A ENSGALG00000033469 20632 lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]











Genes with expression patterns similar to KDM1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KDM1A ENSGALG00000033469 20632 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
2. ADSL ENSGALG00000012034 10280 2.429 - - - - 0.984 - 0.702 0.743 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
3. PAXIP1 ENSGALG00000036064 3120 1.81 - - - - 0.988 - 0.822 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
4. OCIAD1 ENSGALG00000014081 12065 1.765 - - - - 0.970 - 0.795 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
5. MTA1 ENSGALG00000002803 11572 1.764 - - - - 0.962 - 0.802 - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
6. TMEM167A ENSGALG00000027332 13862 1.743 - - - - 0.977 - 0.766 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
7. GPALPP1 ENSGALG00000031567 4221 1.741 - - - - 0.983 - 0.758 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
8. CRIPT ENSGALG00000010014 4311 1.737 - - - - 0.985 - - 0.752 - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
9. SRP68 ENSGALG00000002062 7370 1.73 - - - - 0.982 - 0.748 - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
10. COPG2 ENSGALG00000008144 4542 1.729 - - - - 0.982 - 0.747 - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
11. MPPED1 ENSGALG00000014186 5726 1.717 - - - - 0.974 - 0.743 - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
12. TLK1 ENSGALG00000009569 5446 1.716 - - - - 0.972 - - 0.744 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
13. BTBD7 4136 1.706 - - - - 0.981 - - 0.725 - - BTB domain containing 7, transcript variant X2
14. MAP2K4 ENSGALG00000032178 5982 1.704 - - - - 0.972 - 0.732 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
15. WSB2 ENSGALG00000008151 13246 1.704 - - - - 0.977 - 0.727 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
16. gga-mir-1778 ENSGALG00000025181 8765 1.698 - - - - 0.985 - 0.713 - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
17. CKAP5 ENSGALG00000008325 8494 1.688 - - - - 0.956 - 0.732 - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
18. GOLGA7 ENSGALG00000003483 26525 1.681 - - - - 0.891 - 0.790 - - - golgin A7 [Source:NCBI gene;Acc:426787]
19. PSMD12 ENSGALG00000026225 17473 1.68 - - - - 0.914 - 0.766 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
20. MRPL20 ENSGALG00000001542 28764 1.679 - - - - 0.909 - 0.770 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
21. DYNC1LI1 ENSGALG00000011491 11011 1.672 - - - - 0.961 - - - 0.711 - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
22. BRP44 BRP44 17093 1.649 - - - - 0.899 - 0.750 - - -
23. RANBP1 ENSGALG00000002107 17715 1.646 - - - - 0.880 - 0.766 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
24. GMNN ENSGALG00000013626 15838 1.646 - - - - 0.936 - 0.710 - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
25. R3HDM1 ENSGALG00000012246 6580 1.635 - - - - - - 0.831 0.804 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
26. ZNF593 ENSGALG00000000542 79105 1.604 - - - - 0.887 - 0.717 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
27. KDM5B ENSGALG00000038948 50645 1.553 - - - - 0.846 - 0.707 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
28. INCENP ENSGALG00000007537 16617 1.542 - - - - - - 0.739 0.803 - - inner centromere protein [Source:NCBI gene;Acc:396270]
29. GPR161 ENSGALG00000015247 3473 1.536 - - - - - - 0.813 0.723 - - G protein-coupled receptor 161 [Source:HGNC Symbol;Acc:HGNC:23694]
30. SPCS1 ENSGALG00000001655 7718 1.525 - - - - - - 0.754 0.771 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
31. PSMB7 ENSGALG00000001103 42683 1.517 - - - - 0.750 - 0.767 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
32. TSR1 7656 1.507 - - - - - - 0.734 0.773 - - TSR1, ribosome maturation factor
33. NDUFA12 ENSGALG00000011325 19807 1.505 - - - - - - 0.783 0.722 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
34. HSPBAP1 ENSGALG00000011677 1095 1.502 - - - - - - 0.703 0.799 - - HSPB1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16389]
35. C11H16ORF80 C11H16ORF80 18673 1.498 - - - - - - 0.753 0.745 - -
36. DCPS ENSGALG00000031143 10191 1.497 - - - - - - 0.775 0.722 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
37. MRPL2 ENSGALG00000008597 16500 1.494 - - - - - - 0.790 0.704 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
38. TRIM8 ENSGALG00000036785 5304 1.489 - - - - - - 0.748 0.741 - - tripartite motif containing 8 [Source:NCBI gene;Acc:423864]
39. DHX37 ENSGALG00000002964 3497 1.482 - - - - - - 0.779 0.703 - - DEAH-box helicase 37 [Source:HGNC Symbol;Acc:HGNC:17210]
40. PAPSS1 ENSGALG00000010542 5631 1.479 - - - - - - 0.711 0.768 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
41. TUBB2B ENSGALG00000012821 41535 1.474 - - - - 0.750 - - - 0.724 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
42. CDC42BPB ENSGALG00000011432 8220 1.47 - - - - - - 0.718 0.752 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
43. CWC27 ENSGALG00000014747 8389 1.469 - - - - - - 0.754 0.715 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
44. TIMM8A ENSGALG00000004963 14263 1.463 - - - - - - 0.706 0.757 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
45. AZIN1 ENSGALG00000029295 11085 1.452 - - - - - - 0.714 0.738 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
46. GXYLT1 ENSGALG00000009532 5682 1.45 - - - - - - 0.731 0.719 - - glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
47. DAD1 ENSGALG00000035626 32604 1.447 - - - - - - 0.704 0.743 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
48. TTYH2 ENSGALG00000026940 15628 1.445 - - - - - - 0.744 - 0.701 - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
49. PCM1 ENSGALG00000013602 6347 1.443 - - - - - - 0.721 0.722 - - pericentriolar material 1 [Source:NCBI gene;Acc:395204]
50. CZH9ORF100 CZH9ORF100 4268 1.441 - - - - - - 0.732 - 0.709 -
51. CENPK ENSGALG00000014753 12414 1.435 - - - - - - 0.708 0.727 - - centromere protein K [Source:NCBI gene;Acc:427162]
52. ADI1 ENSGALG00000025796 8636 1.411 - - - - - - 0.709 0.702 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
53. DARS ENSGALG00000012355 2887 0.989 - - - - 0.989 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
54. MTG1 ENSGALG00000003549 5032 0.988 - - - - 0.988 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
55. TDRD3 ENSGALG00000016936 3412 0.988 - - - - 0.988 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
56. AEN ENSGALG00000044204 2633 0.988 - - - - 0.988 - - - - - apoptosis enhancing nuclease, transcript variant X1
57. CLSPN ENSGALG00000002346 2590 0.988 - - - - 0.988 - - - - - claspin [Source:NCBI gene;Acc:428223]
58. RBM15B 5416 0.987 - - - - 0.987 - - - - - RNA binding motif protein 15B
59. MAP1LC3A ENSGALG00000038721 2230 0.986 - - - - 0.986 - - - - - microtubule associated protein 1 light chain 3 alpha
60. PDXP ENSGALG00000023131 2663 0.986 - - - - 0.986 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
61. PCIF1 ENSGALG00000023547 867 0.986 - - - - 0.986 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
62. TMEM65 ENSGALG00000037371 776 0.986 - - - - 0.986 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
63. ENSGALG00000005720 ENSGALG00000005720 1666 0.986 - - - - 0.986 - - - - -
64. GLB1L2 ENSGALG00000001604 4057 0.986 - - - - 0.986 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
65. MAP3K13 ENSGALG00000006655 632 0.986 - - - - 0.986 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
66. CDR2L ENSGALG00000026295 4142 0.985 - - - - 0.985 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
67. CSNK1E ENSGALG00000032257 2165 0.985 - - - - 0.985 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
68. RHBDF1 ENSGALG00000007434 2359 0.985 - - - - 0.985 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
69. C9orf89 C9orf89 3056 0.985 - - - - 0.985 - - - - -
70. KAT6A ENSGALG00000003641 2631 0.985 - - - - 0.985 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
71. MXD4 ENSGALG00000015688 1472 0.985 - - - - 0.985 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
72. ITPK1 ENSGALG00000034898 4212 0.985 - - - - 0.985 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
73. SOD2 ENSGALG00000011661 13178 0.985 - - - - 0.985 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
74. LSMD1 LSMD1 2562 0.985 - - - - 0.985 - - - - -
75. ZNF326 ENSGALG00000006113 15141 0.984 - - - - 0.984 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
76. CNOT2 ENSGALG00000010042 7612 0.984 - - - - 0.984 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
77. PIK3CD ENSGALG00000002583 1036 0.984 - - - - 0.984 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
78. FOCAD ENSGALG00000015071 3677 0.984 - - - - 0.984 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
79. NMT1 ENSGALG00000000857 5770 0.983 - - - - 0.983 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
80. NOL12 ENSGALG00000012410 5658 0.983 - - - - 0.983 - - - - - nucleolar protein 12
81. AIP ENSGALG00000040247 4166 0.983 - - - - 0.983 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
82. TIMM21 ENSGALG00000013709 3215 0.982 - - - - 0.982 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
83. FBXW7 ENSGALG00000010103 5982 0.981 - - - - 0.981 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
84. FAM18B1 ENSGALG00000001335 5177 0.98 - - - - 0.980 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
85. B4GAL-T7 B4GAL-T7 12356 0.979 - - - - 0.979 - - - - -
86. HABP4 ENSGALG00000012628 2894 0.979 - - - - 0.979 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
87. TXNDC9 ENSGALG00000032090 6804 0.978 - - - - 0.978 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
88. TIA1 ENSGALG00000013879 16330 0.977 - - - - 0.977 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
89. MANF ENSGALG00000002362 7518 0.975 - - - - 0.975 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
90. SUGT1 ENSGALG00000016946 22881 0.975 - - - - 0.975 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
91. BRCC3 ENSGALG00000005383 4844 0.974 - - - - 0.974 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
92. LFNG ENSGALG00000038515 5178 0.974 - - - - 0.974 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
93. DRG1 ENSGALG00000006921 10791 0.973 - - - - 0.973 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
94. DECR1 ENSGALG00000036990 6360 0.973 - - - - 0.973 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
95. MRPL32 ENSGALG00000037258 6861 0.973 - - - - 0.973 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
96. TPP2 ENSGALG00000016865 7509 0.972 - - - - 0.972 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
97. EIF4G3 ENSGALG00000010084 5881 0.972 - - - - 0.972 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
98. SH3GLB1 ENSGALG00000006284 12764 0.971 - - - - 0.971 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
99. WDR36 ENSGALG00000000247 11277 0.97 - - - - 0.970 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
100. COPA ENSGALG00000009153 11618 0.969 - - - - 0.969 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]

There are 671 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA