Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for KARS

Gene Name Gene ID Reads Annotation
KARS ENSGALG00000000907 51247 lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]











Genes with expression patterns similar to KARS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. KARS ENSGALG00000000907 51247 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]
2. CLTA ENSGALG00000015326 26867 1.658 - - - - - - 0.931 0.727 - - clathrin light chain A [Source:NCBI gene;Acc:427284]
3. SOD2 ENSGALG00000011661 13178 1.599 - - 0.843 - - - 0.756 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
4. FAM96B 14435 1.586 - - - - 0.705 - 0.881 - - - family with sequence similarity 96 member B
5. TMEM128 ENSGALG00000014992 6567 1.554 - - 0.821 - - - - 0.733 - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
6. COX7A2L ENSGALG00000037996 13646 1.541 - - 0.704 - - - 0.837 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
7. ARF4 ENSGALG00000005622 50567 1.541 - - 0.759 - 0.782 - - - - - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
8. ACO2 ENSGALG00000011950 30387 1.495 - - - - 0.725 - 0.770 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
9. CHMP7 ENSGALG00000000409 8967 1.474 - - - - - - 0.751 0.723 - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
10. SLC25A14 ENSGALG00000004063 5574 1.464 - - 0.715 - - - 0.749 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
11. NDUFB10 ENSGALG00000005465 41984 1.463 - - - - 0.728 - 0.735 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
12. PMM2 ENSGALG00000007326 8260 1.46 - - - - - - 0.739 0.721 - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
13. IFT20 ENSGALG00000005707 23973 0.921 - - - - - - - 0.921 - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
14. C16ORF61 C16ORF61 2998 0.92 - - - - - - - 0.920 - -
15. HNRNPR ENSGALG00000000814 32290 0.915 - - - - - - 0.915 - - - heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:419570]
16. SPTBN1 ENSGALG00000029512 18579 0.906 - - - - - - 0.906 - - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
17. TKT ENSGALG00000005309 19801 0.903 - - - - - - 0.903 - - - transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
18. HADH ENSGALG00000016124 18216 0.897 - - - - - - 0.897 - - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
19. PRPS1 ENSGALG00000004908 27994 0.895 - - - - - - 0.895 - - - phosphoribosyl pyrophosphate synthetase 1
20. MAD2L2 ENSGALG00000004640 3971 0.884 - - - - - - - 0.884 - - MAD2 mitotic arrest deficient-like 2 (yeast) [Source:NCBI gene;Acc:419493]
21. CREPT CREPT 17142 0.881 - - - - - - 0.881 - - -
22. SYBU ENSGALG00000036527 1221 0.872 - - 0.872 - - - - - - - syntabulin [Source:HGNC Symbol;Acc:HGNC:26011]
23. DLX5 ENSGALG00000009129 1395 0.871 - - 0.871 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
24. INTS9 ENSGALG00000016631 742 0.868 - - 0.868 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
25. FBF1 ENSGALG00000002179 1738 0.866 - - 0.866 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
26. SNORA72 SNORA72 27695 0.866 - - - - - - 0.866 - - -
27. ALG14 ENSGALG00000005583 2008 0.866 - - 0.866 - - - - - - - ALG14, UDP-N-acetylglucosaminyltransferase subunit [Source:NCBI gene;Acc:424484]
28. ATG10 ENSGALG00000027714 1100 0.864 - - 0.864 - - - - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
29. SLC4A4 ENSGALG00000031105 534 0.864 - - 0.864 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
30. TXNDC12 ENSGALG00000010569 13822 0.86 - - 0.860 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
31. PLEKHG5 ENSGALG00000027476 42 0.86 - - 0.860 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
32. ZNF423 ENSGALG00000003891 103 0.86 - - 0.860 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
33. AIRC AIRC 15851 0.858 - - - - - - 0.858 - - -
34. ZNF395 ENSGALG00000034140 1868 0.858 - - 0.858 - - - - - - - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
35. GRIK3 ENSGALG00000002098 111 0.858 - - 0.858 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
36. MT1 MT1 218 0.857 - - 0.857 - - - - - - -
37. ZOV3 ZOV3 3267 0.857 - - 0.857 - - - - - - -
38. RHOC ENSGALG00000001569 53 0.857 - - 0.857 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
39. FAM110D ENSGALG00000046085 2193 0.857 - - 0.857 - - - - - - - family with sequence similarity 110 member D [Source:HGNC Symbol;Acc:HGNC:25860]
40. POMC ENSGALG00000016600 99 0.857 - - 0.857 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
41. LGALS3 ENSGALG00000012173 3306 0.855 - - 0.855 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
42. ENSGALG00000023180 ENSGALG00000023180 83 0.855 - - 0.855 - - - - - - -
43. TTC39A ENSGALG00000010540 1025 0.855 - - 0.855 - - - - - - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
44. YLPM1 671 0.854 - - 0.854 - - - - - - - YLP motif containing 1
45. MGMT ENSGALG00000042949 53 0.854 - - 0.854 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
46. KIAA0195 KIAA0195 48 0.853 - - 0.853 - - - - - - -
47. PHF2 ENSGALG00000039208 2003 0.853 - - 0.853 - - - - - - - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
48. ADAMTS2 ENSGALG00000032974 141 0.852 - - 0.852 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
49. MAN1A1 ENSGALG00000014878 1061 0.852 - - 0.852 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
50. NCAPD3 ENSGALG00000001491 221 0.851 - - 0.851 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
51. GTF2E1 ENSGALG00000042320 7712 0.851 - - - - - - 0.851 - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
52. PSMA6 ENSGALG00000010060 26517 0.851 - - - - - - 0.851 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
53. LYPD6B ENSGALG00000028759 831 0.85 - - 0.850 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
54. FBXO34 ENSGALG00000032563 656 0.85 - - 0.850 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
55. MYO18A ENSGALG00000003741 1023 0.85 - - 0.850 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
56. MRPL19 ENSGALG00000016731 22670 0.849 - - - - - - 0.849 - - - mitochondrial ribosomal protein L19, transcript variant X1
57. TMEM104 ENSGALG00000007747 2390 0.849 - - 0.849 - - - - - - - transmembrane protein 104 [Source:NCBI gene;Acc:422110]
58. TRIM45 ENSGALG00000014818 1258 0.849 - - 0.849 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
59. ATP2B2 ENSGALG00000030908 584 0.849 - - 0.849 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
60. CROT ENSGALG00000008813 8052 0.849 - - 0.849 - - - - - - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
61. BMP2 ENSGALG00000029301 379 0.848 - - 0.848 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
62. KIF15 ENSGALG00000036645 9946 0.847 - - - - - - 0.847 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
63. GABPA ENSGALG00000015763 11567 0.847 - - - - - - 0.847 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
64. RAB3B ENSGALG00000010567 894 0.846 - - 0.846 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
65. EXTL2 ENSGALG00000027984 808 0.846 - - 0.846 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
66. KLHL15 ENSGALG00000016345 1638 0.845 - - 0.845 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
67. TSEN2 ENSGALG00000004981 1929 0.845 - - 0.845 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
68. LRR1 ENSGALG00000012230 1062 0.845 - - 0.845 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
69. SORCS1 ENSGALG00000008465 468 0.843 - - 0.843 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
70. PKP4 ENSGALG00000012561 3087 0.843 - - 0.843 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
71. TCP1 ENSGALG00000011637 73216 0.843 - - - - - - 0.843 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
72. TP53BP2 ENSGALG00000042816 12368 0.841 - - - - - - 0.841 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
73. ITPR1 ENSGALG00000008294 1226 0.84 - - 0.840 - - - - - - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
74. DNAJC18 ENSGALG00000002528 2666 0.84 - - 0.840 - - - - - - - DnaJ heat shock protein family (Hsp40) member C18 [Source:NCBI gene;Acc:416189]
75. UBR7 ENSGALG00000010842 16488 0.839 - - - - - - 0.839 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
76. IP6K1 ENSGALG00000002510 827 0.839 - - 0.839 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
77. TFAP2B ENSGALG00000016680 829 0.839 - - 0.839 - - - - - - - transcription factor AP-2 beta [Source:NCBI gene;Acc:395713]
78. SULT2B1L1 ENSGALG00000023472 569 0.839 - - 0.839 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
79. TOMM20 ENSGALG00000035299 23431 0.838 - - - - - - - 0.838 - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
80. RBM19 ENSGALG00000008289 10702 0.838 - - 0.838 - - - - - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
81. GOLGA2 ENSGALG00000004881 677 0.838 - - 0.838 - - - - - - - golgin A2, transcript variant X7
82. CDV3 ENSGALG00000032316 693 0.838 - - 0.838 - - - - - - - CDV3 homolog [Source:NCBI gene;Acc:420693]
83. ACOT9 ENSGALG00000016351 330 0.837 - - 0.837 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
84. GPX1 ENSGALG00000028204 62935 0.837 - - - - - - 0.837 - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
85. FAM134A 1600 0.835 - - 0.835 - - - - - - - family with sequence similarity 134 member A
86. CXorf30 CXorf30 172 0.832 - - 0.832 - - - - - - -
87. TMEM200C ENSGALG00000030210 1434 0.831 - - 0.831 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
88. EIF3M ENSGALG00000012109 38661 0.831 - - - - - - 0.831 - - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
89. AP3M1 ENSGALG00000005070 712 0.831 - - 0.831 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
90. LARS2 ENSGALG00000036309 2624 0.83 - - 0.830 - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17095]
91. COPE ENSGALG00000003153 19444 0.83 - - - - - - 0.830 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
92. TMEM97 ENSGALG00000005702 2037 0.83 - - 0.830 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
93. ENTPD5 ENSGALG00000010202 69 0.829 - - 0.829 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
94. PEPD ENSGALG00000004899 9785 0.829 - - - - - - 0.829 - - - peptidase D [Source:NCBI gene;Acc:415776]
95. GNMT ENSGALG00000043290 3288 0.829 - - 0.829 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
96. RPUSD1 ENSGALG00000005315 651 0.829 - - 0.829 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
97. PSMC2 ENSGALG00000008236 25980 0.827 - - - - - - 0.827 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
98. MINOS1 ENSGALG00000004039 37740 0.827 - - - - - - 0.827 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
99. MRPL44 ENSGALG00000003067 15256 0.826 - - - - - - 0.826 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
100. CASP1 ENSGALG00000001049 1067 0.825 - - 0.825 - - - - - - - caspase 1, transcript variant X2

There are 357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA