Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for JSC

Gene Name Gene ID Reads Annotation
JSC JSC 7982











Genes with expression patterns similar to JSC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. JSC JSC 7982 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. KERA ENSGALG00000011270 4204 2.532 - - - - 0.949 0.850 - - - 0.733 keratocan [Source:NCBI gene;Acc:373995]
3. PRTG ENSGALG00000037336 34665 2.516 - - - - - 0.825 0.759 0.932 - - protogenin [Source:NCBI gene;Acc:415407]
4. EXO1 ENSGALG00000010748 7572 1.843 - - - - 0.858 - - 0.985 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
5. ELAVL4 ENSGALG00000010533 4978 1.743 - - - - - 0.768 - 0.975 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
6. FST ENSGALG00000014908 3182 1.68 - - - - - 0.874 0.806 - - - follistatin [Source:NCBI gene;Acc:396119]
7. IGDCC4 ENSGALG00000007410 5457 1.66 - - - - 0.926 - 0.734 - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
8. TMEM108 ENSGALG00000036412 2903 1.646 - - - - - 0.904 - - - 0.742 transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
9. ENSGALG00000023609 ENSGALG00000023609 6933 1.601 - - - - - - 0.758 0.843 - -
10. C1QTNF3 ENSGALG00000027887 8646 1.596 - - - - - 0.854 - - - 0.742 C1q and tumor necrosis factor related protein 3, transcript variant X1
11. FABP5 ENSGALG00000041344 3984 1.576 - - - - - 0.828 0.748 - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
12. HSPA8 ENSGALG00000006512 124825 1.566 - - - - 0.754 0.812 - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
13. SMOC1 ENSGALG00000009415 2403 1.55 - - - - - 0.775 - - - 0.775 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
14. AKAP12 ENSGALG00000036240 64617 1.55 - - - - - 0.700 - - - 0.850 A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
15. RGMA ENSGALG00000039173 12874 1.542 - - - - - 0.841 0.701 - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
16. HES5 ENSGALG00000001141 6514 1.51 - - - - - 0.734 0.776 - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
17. LDHA ENSGALG00000006300 4796 1.51 - - - - - 0.753 0.757 - - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
18. UBE2N ENSGALG00000030515 32059 1.499 - - - - 0.776 - - 0.723 - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
19. LGR5 ENSGALG00000010163 2931 1.497 - - - - - 0.739 - - - 0.758 leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
20. TCF15 ENSGALG00000026276 3646 1.481 - - - - - 0.780 - - - 0.701 transcription factor 15 [Source:NCBI gene;Acc:395788]
21. USP10 ENSGALG00000005674 7768 1.445 - - - - 0.729 - 0.716 - - - ubiquitin specific peptidase 10 [Source:NCBI gene;Acc:415817]
22. CKB ENSGALG00000011511 2100 1.443 - - - - - 0.723 - - - 0.720 creatine kinase B [Source:NCBI gene;Acc:396248]
23. gga-mir-6587 ENSGALG00000026386 9441 0.982 - - - - - - - 0.982 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
24. CENPL ENSGALG00000038411 4867 0.982 - - - - - - - 0.982 - - centromere protein L [Source:NCBI gene;Acc:426563]
25. NBL1 ENSGALG00000040297 8165 0.982 - - - - - - - 0.982 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
26. PPM1D ENSGALG00000035610 6530 0.981 - - - - - - - 0.981 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
27. TMEM126A ENSGALG00000014066 6149 0.981 - - - - - - - 0.981 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
28. PDHB ENSGALG00000029576 12254 0.98 - - - - - - - 0.980 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
29. NVL ENSGALG00000009322 5286 0.98 - - - - - - - 0.980 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
30. C6ORF192 C6ORF192 4224 0.98 - - - - - - - 0.980 - -
31. CETN1 ENSGALG00000026741 7243 0.98 - - - - - - - 0.980 - - centrin 1 [Source:NCBI gene;Acc:422668]
32. MAP2K2 ENSGALG00000001267 3857 0.979 - - - - - - - 0.979 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
33. RNFT1 ENSGALG00000005205 2888 0.979 - - - - - - - 0.979 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
34. RCOR3 ENSGALG00000009871 7022 0.979 - - - - - - - 0.979 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
35. FUNDC2 ENSGALG00000029585 9334 0.979 - - - - - - - 0.979 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
36. CDCA7 ENSGALG00000040833 7484 0.979 - - - - - - - 0.979 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
37. CRELD2 ENSGALG00000008551 2084 0.978 - - - - - - - 0.978 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
38. SLC35D1 ENSGALG00000011121 4456 0.977 - - - - - - - 0.977 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
39. SNIP1 ENSGALG00000002010 1429 0.977 - - - - - - - 0.977 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
40. TMEM192 ENSGALG00000009528 2428 0.977 - - - - - - - 0.977 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
41. ZNF319 ENSGALG00000000999 1272 0.977 - - - - - - - 0.977 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
42. ATP2B4 ENSGALG00000003601 3746 0.976 - - - - - - - 0.976 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
43. PIGL ENSGALG00000004492 669 0.976 - - - - - - - 0.976 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
44. CRNKL1 ENSGALG00000008429 7280 0.976 - - - - - - - 0.976 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
45. RBM7 ENSGALG00000007017 8779 0.976 - - - - - - - 0.976 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
46. ATE1 ENSGALG00000009502 3751 0.976 - - - - - - - 0.976 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
47. PDCD6IP ENSGALG00000033500 580 0.975 - - - - - - - 0.975 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
48. RNF168 ENSGALG00000006392 507 0.975 - - - - - - - 0.975 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
49. FBF1 ENSGALG00000002179 1738 0.975 - - - - - - - 0.975 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
50. SPDYA ENSGALG00000017392 503 0.975 - - - - - - - 0.975 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
51. RFT1 ENSGALG00000001945 2446 0.975 - - - - - - - 0.975 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
52. ENSGALG00000012250 ENSGALG00000012250 581 0.974 - - - - - - - 0.974 - -
53. ALS2 ENSGALG00000008415 2576 0.974 - - - - - - - 0.974 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
54. PPP3R1 ENSGALG00000023648 3417 0.974 - - - - - - - 0.974 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
55. G3BP2 ENSGALG00000010882 21129 0.973 - - - - - - - 0.973 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
56. DLC1 ENSGALG00000013715 5297 0.973 - - - - - - - 0.973 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
57. RAI2 ENSGALG00000016538 1074 0.972 - - - - - - - 0.972 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
58. PMP22 ENSGALG00000031425 5358 0.972 - - - - - - - 0.972 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
59. YAF2 ENSGALG00000009540 8452 0.97 - - - - - - - 0.970 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
60. TTL ENSGALG00000008614 3991 0.969 - - - - - - - 0.969 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
61. IFNAR2 ENSGALG00000041867 1596 0.968 - - - - - - - 0.968 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
62. GARS ENSGALG00000005694 18264 0.962 - - - - - - - 0.962 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
63. RFC3 ENSGALG00000017064 7011 0.961 - - - - - - - 0.961 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
64. COX7A2L ENSGALG00000037996 13646 0.96 - - - - - - - 0.960 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
65. AP2B1 ENSGALG00000042125 13229 0.956 - - - - - - - 0.956 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
66. KIAA0196 KIAA0196 4011 0.95 - - - - - - - 0.950 - -
67. XPO5 ENSGALG00000010341 24765 0.948 - - - - - - - 0.948 - - exportin 5 [Source:NCBI gene;Acc:421450]
68. SBNO1 ENSGALG00000003392 6731 0.947 - - - - - - - 0.947 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
69. TPD52 ENSGALG00000040167 9891 0.945 - - - - - - - 0.945 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
70. INPP5A ENSGALG00000010493 6769 0.943 - - - - - - - 0.943 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
71. LY6E ENSGALG00000041621 16227 0.942 - - - - 0.942 - - - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
72. NUP107 ENSGALG00000009934 2097 0.939 - - - - - - - 0.939 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
73. SFT2D1 ENSGALG00000020005 10855 0.937 - - - - - - - 0.937 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
74. ANKRD11 ENSGALG00000006222 12327 0.927 - - - - - - - 0.927 - - ankyrin repeat domain 11, transcript variant X2
75. MRPL54 ENSGALG00000027611 39450 0.927 - - - - - - - 0.927 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
76. SH2D3C ENSGALG00000005036 5101 0.925 - - - - 0.925 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
77. XRCC5 ENSGALG00000011492 6802 0.921 - - - - - - - 0.921 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
78. REEP5 ENSGALG00000023157 6282 0.917 - - - - 0.917 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
79. SSR2 ENSGALG00000000764 32190 0.916 - - - - 0.916 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
80. ZBTB10 ENSGALG00000034376 3271 0.913 - - - - 0.913 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
81. ANXA2 ENSGALG00000003770 18252 0.912 - - - - 0.912 - - - - - annexin A2 [Source:NCBI gene;Acc:396297]
82. REST 2394 0.912 - - - - 0.912 - - - - - RE1 silencing transcription factor
83. PPA2 ENSGALG00000010582 22301 0.911 - - - - - - - 0.911 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
84. TRAPPC12 ENSGALG00000016387 2593 0.91 - - - - 0.910 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
85. LATS2 4776 0.91 - - - - 0.910 - - - - - large tumor suppressor kinase 2
86. TLCD1 ENSGALG00000003973 17569 0.91 - - - - 0.910 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
87. FH ENSGALG00000013165 13669 0.91 - - - - 0.910 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
88. SSPN ENSGALG00000014042 638 0.91 - - - - 0.910 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
89. CBWD1 ENSGALG00000010147 2765 0.909 - - - - 0.909 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
90. CTSZ ENSGALG00000007462 630 0.908 - - - - 0.908 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
91. COIL ENSGALG00000003158 7806 0.908 - - - - 0.908 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
92. MKI67 ENSGALG00000025996 28136 0.908 - - - - 0.908 - - - - - marker of proliferation Ki-67, transcript variant X3
93. FERMT2 ENSGALG00000012425 5480 0.907 - - - - 0.907 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
94. CSNK1G1 ENSGALG00000030812 31618 0.907 - - - - 0.907 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
95. ELL2 ENSGALG00000014678 1111 0.906 - - - - 0.906 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
96. CZH9ORF41 CZH9ORF41 3492 0.906 - - - - 0.906 - - - - -
97. TAGLN3 ENSGALG00000015379 7865 0.906 - - - - - 0.906 - - - - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
98. POLR3F ENSGALG00000008749 5645 0.905 - - - - 0.905 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
99. IGBP1 ENSGALG00000044628 9200 0.905 - - - - 0.905 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
100. XPO7 ENSGALG00000001838 1875 0.905 - - - - 0.905 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]

There are 220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA