Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for JAM3

Gene Name Gene ID Reads Annotation
JAM3 ENSGALG00000001472 13162 junctional adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:15532]











Genes with expression patterns similar to JAM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. JAM3 ENSGALG00000001472 13162 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 junctional adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:15532]
2. C1H12ORF23 C1H12ORF23 13234 0.863 - - - - - - 0.863 - - -
3. CHMP6 ENSGALG00000026428 18026 0.841 - - - - - - 0.841 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
4. DERL1 ENSGALG00000033950 15074 0.834 - - - - - - 0.834 - - - derlin 1 [Source:NCBI gene;Acc:420350]
5. YWHAZ ENSGALG00000031387 84985 0.832 - - - - - - 0.832 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
6. CHP1 ENSGALG00000008569 6876 0.832 - - - - - - 0.832 - - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
7. NUP85 ENSGALG00000007974 21249 0.829 - - - - - - 0.829 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
8. SEC63 ENSGALG00000015308 11596 0.829 - - - - - - 0.829 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
9. API5 ENSGALG00000037968 18265 0.828 - - - - - - 0.828 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
10. SEC23A_1 ENSGALG00000010150 14745 0.827 - - - - - - 0.827 - - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
11. HSPA4 ENSGALG00000040882 20966 0.824 - - - - - - 0.824 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
12. MZT1 ENSGALG00000016932 9269 0.823 - - - - - - 0.823 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
13. AP2A2 ENSGALG00000006799 13874 0.822 - - - - - - 0.822 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
14. PCTP ENSGALG00000003099 5851 0.822 - - - - - - 0.822 - - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
15. KIF2C ENSGALG00000010120 8999 0.821 - - - - - - 0.821 - - - kinesin family member 2C, transcript variant X1
16. CCNC ENSGALG00000015471 6497 0.821 - - - - - - 0.821 - - - cyclin C [Source:NCBI gene;Acc:421791]
17. BAG5 ENSGALG00000031062 4498 0.821 - - - - - - 0.821 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
18. TMEM70 ENSGALG00000033568 10720 0.819 - - - - - - 0.819 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
19. TTC27 ENSGALG00000010538 9685 0.818 - - - - - - 0.818 - - - tetratricopeptide repeat domain 27 [Source:NCBI gene;Acc:421462]
20. GABARAPL2 ENSGALG00000003208 9195 0.817 - - - - - - 0.817 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
21. CLTCL1 ENSGALG00000041760 9351 0.817 - - - - - - 0.817 - - - clathrin, heavy chain-like 1, transcript variant X6
22. POLE3 ENSGALG00000008873 9161 0.815 - - - - - - 0.815 - - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
23. POGLUT1 ENSGALG00000015480 12290 0.813 - - - - - - 0.813 - - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
24. SMC4 ENSGALG00000009553 15715 0.808 - - - - - - 0.808 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
25. XRN2 ENSGALG00000008372 22164 0.807 - - - - - - 0.807 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
26. INTS2 ENSGALG00000005269 6966 0.807 - - - - - - 0.807 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
27. BRP44 BRP44 17093 0.807 - - - - - - 0.807 - - -
28. MAP3K7 ENSGALG00000015596 15164 0.806 - - - - - - 0.806 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
29. PREP ENSGALG00000015405 17050 0.804 - - - - - - 0.804 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
30. NCAPD2 ENSGALG00000039448 8658 0.802 - - - - - - 0.802 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
31. THRAP3 ENSGALG00000002144 21958 0.802 - - - - - - 0.802 - - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
32. SALL4 ENSGALG00000041365 6760 0.802 - - - - - - 0.802 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
33. NOVA1 ENSGALG00000009850 7584 0.801 - - - - - - 0.801 - - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
34. APPBP2 ENSGALG00000005314 6447 0.8 - - - - - - 0.800 - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
35. PLRG1 ENSGALG00000009257 8613 0.8 - - - - - - 0.800 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
36. DNAJC3 ENSGALG00000016894 9048 0.8 - - - - - - 0.800 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
37. C1QBP ENSGALG00000001654 34814 0.8 - - - - - - 0.800 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
38. TMEM167A ENSGALG00000027332 13862 0.798 - - - - - - 0.798 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
39. C11H16ORF80 C11H16ORF80 18673 0.798 - - - - - - 0.798 - - -
40. RIOK2 ENSGALG00000015288 6280 0.797 - - - - - - 0.797 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
41. GPC4 ENSGALG00000006080 56498 0.796 - - - - - - 0.796 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
42. GLO1 ENSGALG00000010127 31662 0.795 - - - - - - 0.795 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
43. SENP6 ENSGALG00000015901 8013 0.795 - - - - - - 0.795 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
44. GATD3A ENSGALG00000016918 24760 0.794 - - - - - - 0.794 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
45. CAMK2G ENSGALG00000005088 5037 0.794 - - - - - - 0.794 - - - calcium/calmodulin dependent protein kinase II gamma [Source:HGNC Symbol;Acc:HGNC:1463]
46. TTC37 ENSGALG00000014670 5715 0.792 - - - - - - 0.792 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
47. VATB VATB 13756 0.792 - - - - - - 0.792 - - -
48. COMMD4 ENSGALG00000001572 31664 0.792 - - - - - - 0.792 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
49. R3HDM1 ENSGALG00000012246 6580 0.791 - - - - - - 0.791 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
50. GSPT1 15580 0.79 - - - - - - 0.790 - - - G1 to S phase transition 1, transcript variant X1
51. LSM5 ENSGALG00000041625 22307 0.79 - - - - - - 0.790 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
52. CDC40 ENSGALG00000015061 6118 0.789 - - - - - - 0.789 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
53. ZNF593 ENSGALG00000000542 79105 0.789 - - - - - - 0.789 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
54. ATP5L ENSGALG00000006899 69561 0.789 - - - - - - 0.789 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
55. ANKRA2 ENSGALG00000013511 3460 0.788 - - - - - - 0.788 - - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
56. FKBP15 ENSGALG00000008838 3677 0.787 - - - - - - 0.787 - - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
57. MRPL30 ENSGALG00000016760 16965 0.787 - - - - - - 0.787 - - - mitochondrial ribosomal protein L30
58. CRLS1 ENSGALG00000009214 8652 0.787 - - - - - - 0.787 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
59. TMEM30A ENSGALG00000015904 8533 0.786 - - - - - - 0.786 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
60. TMX3 ENSGALG00000013757 6387 0.785 - - - - - - 0.785 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
61. TNRC6A ENSGALG00000006068 9166 0.785 - - - - - - - - 0.785 - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
62. SPTLC1 ENSGALG00000013493 3918 0.785 - - - - - - 0.785 - - - serine palmitoyltransferase long chain base subunit 1 [Source:HGNC Symbol;Acc:HGNC:11277]
63. RNH1 ENSGALG00000006904 14542 0.785 - - - - - - 0.785 - - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
64. C15orf27 C15orf27 1206 0.785 - - - - - - 0.785 - - -
65. PARP1 ENSGALG00000009228 39433 0.784 - - - - - - 0.784 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
66. CDC45 ENSGALG00000001616 8432 0.784 - - - - - - 0.784 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
67. MRPL15 ENSGALG00000041086 16820 0.784 - - - - - - 0.784 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
68. TOR1AIP1 ENSGALG00000029238 5843 0.783 - - - - - - 0.783 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
69. DGCR2 ENSGALG00000005891 8405 0.783 - - - - - - 0.783 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
70. LARP7 ENSGALG00000012048 8393 0.781 - - - - - - 0.781 - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
71. VIMENTIN VIMENTIN 33105 0.781 - - - - - - 0.781 - - -
72. UBE2V1 ENSGALG00000008015 17947 0.781 - - - - - - 0.781 - - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
73. MAP4K3 ENSGALG00000039720 5124 0.781 - - - - - - 0.781 - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
74. EBNA1BP2 ENSGALG00000009045 17453 0.781 - - - - - - 0.781 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
75. CZH9ORF80 CZH9ORF80 12760 0.781 - - - - - - 0.781 - - -
76. FAM160B1 ENSGALG00000031404 3153 0.781 - - - - - - 0.781 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
77. TMEM185A ENSGALG00000009139 4424 0.78 - - - - - - 0.780 - - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
78. ITGB1 ENSGALG00000007145 19551 0.78 - - - - - - 0.780 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
79. OTUD4 ENSGALG00000009968 3919 0.779 - - - - - - 0.779 - - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
80. LIMD1 ENSGALG00000035623 7282 0.779 - - - - - - 0.779 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
81. ULK2 ENSGALG00000004727 10729 0.779 - - - - - - 0.779 - - - unc-51 like autophagy activating kinase 2 [Source:HGNC Symbol;Acc:HGNC:13480]
82. PES1 ENSGALG00000007778 12248 0.778 - - - - - - 0.778 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
83. THAP5 ENSGALG00000009494 6540 0.778 - - - - - - 0.778 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
84. SNF8 ENSGALG00000001309 7398 0.778 - - - - - - 0.778 - - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
85. PSMD12 ENSGALG00000026225 17473 0.778 - - - - - - 0.778 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
86. XPO4 ENSGALG00000017132 2538 0.777 - - - - - - 0.777 - - - exportin 4 [Source:NCBI gene;Acc:428081]
87. CCDC88C ENSGALG00000040156 6191 0.777 - - - - - - 0.777 - - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
88. WDR53 ENSGALG00000006395 4938 0.775 - - - - - - 0.775 - - - WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
89. NOC4L ENSGALG00000002272 9644 0.775 - - - - - - 0.775 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
90. TARDBP ENSGALG00000002906 24748 0.775 - - - - - - 0.775 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
91. MRPL54 ENSGALG00000027611 39450 0.774 - - - - - - 0.774 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
92. TAF1A ENSGALG00000009441 2431 0.774 - - - - - - 0.774 - - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
93. UBE2D1 ENSGALG00000021213 5876 0.774 - - - - - - 0.774 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
94. PPP1R2 ENSGALG00000029789 11594 0.773 - - - - - - 0.773 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
95. FIBIN ENSGALG00000023904 3350 0.773 - - - - - - - - 0.773 - fin bud initiation factor homolog [Source:NCBI gene;Acc:426933]
96. SMARCA5 ENSGALG00000009913 20059 0.773 - - - - - - 0.773 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:HGNC:11101]
97. PDHB ENSGALG00000029576 12254 0.772 - - - - - - 0.772 - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
98. BMS1 ENSGALG00000002624 8339 0.772 - - - - - - 0.772 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
99. CCNH ENSGALG00000015641 8051 0.771 - - - - - - 0.771 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
100. MRPL20 ENSGALG00000001542 28764 0.77 - - - - - - 0.770 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]

There are 381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA