Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Itga1

Gene Name Gene ID Reads Annotation
Itga1 ENSMUSG00000042284 145 integrin alpha 1 [Source:MGI Symbol;Acc:MGI:96599]







Genes with expression patterns similar to Itga1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Itga1 ENSMUSG00000042284 145 6 1.000 1.000 1.000 1.000 1.000 1.000 integrin alpha 1 [Source:MGI Symbol;Acc:MGI:96599]
2. BC065397 ENSMUSG00000087368 732 0.823 - - - - 0.823 - cDNA sequence BC065397 [Source:MGI Symbol;Acc:MGI:3584520]
3. Prdm10 ENSMUSG00000042496 118 0.82 - - - - 0.820 - PR domain containing 10 [Source:MGI Symbol;Acc:MGI:2682952]
4. Slc38a7 ENSMUSG00000036534 269 0.82 - - 0.820 - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
5. A330035P11Rik ENSMUSG00000085615 95 0.82 - - - - 0.820 - RIKEN cDNA A330035P11 gene [Source:MGI Symbol;Acc:MGI:2442610]
6. Gm6723 ENSMUSG00000068226 35 0.798 - - 0.798 - - - predicted pseudogene 6723 [Source:MGI Symbol;Acc:MGI:3648054]
7. Rpl23a-ps2 ENSMUSG00000081968 114 0.786 - - 0.786 - - - ribosomal protein L23A, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3651561]
8. G730013B05Rik ENSMUSG00000097694 5 0.782 - - 0.782 - - - RIKEN cDNA G730013B05 gene [Source:MGI Symbol;Acc:MGI:3588276]
9. 3830403N18Rik ENSMUSG00000031125 31 0.78 - - 0.780 - - - RIKEN cDNA 3830403N18 gene [Source:MGI Symbol;Acc:MGI:1917941]
10. Slc19a2 ENSMUSG00000040918 135 0.776 - - 0.776 - - - solute carrier family 19 (thiamine transporter), member 2 [Source:MGI Symbol;Acc:MGI:1928761]
11. Nfe2l1 ENSMUSG00000038615 1624 0.771 - - - - 0.771 - nuclear factor, erythroid derived 2,-like 1 [Source:MGI Symbol;Acc:MGI:99421]
12. Gm12091 ENSMUSG00000085893 8 0.77 - - 0.770 - - - predicted gene 12091 [Source:MGI Symbol;Acc:MGI:3650089]
13. Lipt1 ENSMUSG00000037216 187 0.769 - - 0.769 - - - lipoyltransferase 1 [Source:MGI Symbol;Acc:MGI:3645211]
14. 2010001K21Rik ENSMUSG00000051606 3 0.769 - - 0.769 - - - RIKEN cDNA 2010001K21 gene [Source:MGI Symbol;Acc:MGI:1917079]
15. Ccdc42 ENSMUSG00000045915 11 0.764 - - 0.764 - - - coiled-coil domain containing 42 [Source:MGI Symbol;Acc:MGI:3045254]
16. Gm15408 ENSMUSG00000086610 8 0.763 - - 0.763 - - - predicted gene 15408 [Source:MGI Symbol;Acc:MGI:3705101]
17. Gm23667 ENSMUSG00000088091 2 0.762 - - 0.762 - - - predicted gene, 23667 [Source:MGI Symbol;Acc:MGI:5453444]
18. Gm5537 ENSMUSG00000069008 2 0.762 - - 0.762 - - - predicted gene 5537 [Source:MGI Symbol;Acc:MGI:3643179]
19. Cyp2c44 11 0.762 - - 0.762 - - - cytochrome P450, family 2, subfamily c, polypeptide 44, transcript variant X1
20. Gm6451 ENSMUSG00000084166 11 0.762 - - 0.762 - - - predicted gene 6451 [Source:MGI Symbol;Acc:MGI:3648305]
21. Apob ENSMUSG00000020609 7 0.762 - - 0.762 - - - apolipoprotein B [Source:MGI Symbol;Acc:MGI:88052]
22. Grin2a ENSMUSG00000059003 9 0.762 - - 0.762 - - - glutamate receptor, ionotropic, NMDA2A (epsilon 1) [Source:MGI Symbol;Acc:MGI:95820]
23. Gm410 Gm410 9 0.762 - - 0.762 - - -
24. Smtnl1 ENSMUSG00000027077 5 0.762 - - 0.762 - - - smoothelin-like 1 [Source:MGI Symbol;Acc:MGI:1915928]
25. Gm26163 ENSMUSG00000065726 4 0.762 - - 0.762 - - - predicted gene, 26163 [Source:MGI Symbol;Acc:MGI:5455940]
26. Gm17473 ENSMUSG00000097805 2 0.762 - - 0.762 - - - predicted gene, 17473 [Source:MGI Symbol;Acc:MGI:4937107]
27. Mageb16 ENSMUSG00000046942 27 0.762 - - 0.762 - - - melanoma antigen family B, 16 [Source:MGI Symbol;Acc:MGI:1919217]
28. Gm16372 ENSMUSG00000057160 2 0.762 - - 0.762 - - - predicted pseudogene 16372 [Source:MGI Symbol;Acc:MGI:3648102]
29. Gm24519 ENSMUSG00000096675 3 0.762 - - 0.762 - - - predicted gene, 24519 [Source:MGI Symbol;Acc:MGI:5454296]
30. AU018091 ENSMUSG00000054753, ENSMUSG00000107871 10 0.761 - - 0.761 - - - expressed sequence AU018091 [Source:MGI Symbol;Acc:MGI:2142124]
31. Snhg12 ENSMUSG00000086290 532 0.76 - - - - 0.760 - small nucleolar RNA host gene 12 [Source:MGI Symbol;Acc:MGI:1916721]
32. mmu-mir-6951 mmu-mir-6951 10 0.759 - - 0.759 - - -
33. Slc6a15 ENSMUSG00000019894 81 0.757 - - 0.757 - - - solute carrier family 6 (neurotransmitter transporter), member 15 [Source:MGI Symbol;Acc:MGI:2143484]
34. Gm12829 ENSMUSG00000085870 7 0.755 - - 0.755 - - - predicted gene 12829 [Source:MGI Symbol;Acc:MGI:3650003]
35. Gm13785 ENSMUSG00000081730 24 0.755 - - 0.755 - - - predicted gene 13785 [Source:MGI Symbol;Acc:MGI:3649781]
36. Gm9144 ENSMUSG00000073233 271 0.754 - - - - 0.754 - predicted gene 9144 [Source:MGI Symbol;Acc:MGI:3643264]
37. Wdr93 ENSMUSG00000039099 10 0.754 - - 0.754 - - - WD repeat domain 93 [Source:MGI Symbol;Acc:MGI:3646885]
38. Jph4 ENSMUSG00000022208 95 0.754 - - 0.754 - - - junctophilin 4 [Source:MGI Symbol;Acc:MGI:2443113]
39. Plekhs1 ENSMUSG00000035818 6 0.754 - - 0.754 - - - pleckstrin homology domain containing, family S member 1 [Source:MGI Symbol;Acc:MGI:2443041]
40. Cblc ENSMUSG00000040525 8 0.753 - - 0.753 - - - Casitas B-lineage lymphoma c [Source:MGI Symbol;Acc:MGI:1931457]
41. Gm26604 ENSMUSG00000097079 11 0.752 - - 0.752 - - - predicted gene, 26604 [Source:MGI Symbol;Acc:MGI:5477098]
42. Lct ENSMUSG00000026354 17 0.751 - - 0.751 - - - lactase [Source:MGI Symbol;Acc:MGI:104576]
43. Eva1c ENSMUSG00000039903 8 0.75 - - 0.750 - - - eva-1 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1918217]
44. Gm16399 ENSMUSG00000097790 41 0.748 - - 0.748 - - - predicted pseudogene 16399 [Source:MGI Symbol;Acc:MGI:3645963]
45. Gm10247 ENSMUSG00000068674 23 0.748 - - 0.748 - - - predicted gene 10247 [Source:MGI Symbol;Acc:MGI:3641838]
46. Gm26740 ENSMUSG00000097705 13 0.747 - - 0.747 - - - predicted gene, 26740 [Source:MGI Symbol;Acc:MGI:5477234]
47. 1700028I16Rik ENSMUSG00000056821 3 0.747 - - 0.747 - - - RIKEN cDNA 1700028I16 gene [Source:MGI Symbol;Acc:MGI:1917253]
48. Gm53 ENSMUSG00000078706 79 0.745 - - 0.745 - - - predicted gene 53 [Source:MGI Symbol;Acc:MGI:2684899]
49. Fam20a ENSMUSG00000020614 6 0.744 - - 0.744 - - - family with sequence similarity 20, member A [Source:MGI Symbol;Acc:MGI:2388266]
50. Gm3671 ENSMUSG00000098232 3 0.743 - - 0.743 - - - predicted gene 3671 [Source:MGI Symbol;Acc:MGI:3781847]
51. Gm6938 ENSMUSG00000087586 8 0.742 - - 0.742 - - - predicted gene 6938 [Source:MGI Symbol;Acc:MGI:3648987]
52. Spg11 ENSMUSG00000033396 23 0.742 - - 0.742 - - - SPG11, spatacsin vesicle trafficking associated [Source:MGI Symbol;Acc:MGI:2444989]
53. Gm26748 ENSMUSG00000097548 7 0.742 - - 0.742 - - - predicted gene, 26748 [Source:MGI Symbol;Acc:MGI:5477242]
54. Wbscr25 ENSMUSG00000054909 10 0.741 - - 0.741 - - - Williams Beuren syndrome chromosome region 25 (human) [Source:MGI Symbol;Acc:MGI:1918554]
55. 6030443J06Rik ENSMUSG00000097207 38 0.741 - - 0.741 - - - RIKEN cDNA 6030443J06 gene [Source:MGI Symbol;Acc:MGI:2444595]
56. Gm12380 ENSMUSG00000084148 10 0.739 - - 0.739 - - - predicted gene 12380 [Source:MGI Symbol;Acc:MGI:3651854]
57. Gm14324 ENSMUSG00000080709 31 0.736 - - 0.736 - - - predicted gene 14324 [Source:MGI Symbol;Acc:MGI:3652186]
58. Fam71f2 ENSMUSG00000079652 8 0.735 - - 0.735 - - - family with sequence similarity 71, member F2 [Source:MGI Symbol;Acc:MGI:2141439]
59. Lrrtm2 ENSMUSG00000071862 15 0.735 - - 0.735 - - - leucine rich repeat transmembrane neuronal 2 [Source:MGI Symbol;Acc:MGI:2389174]
60. A330009N23Rik ENSMUSG00000097915 40 0.735 - - 0.735 - - - RIKEN cDNA A330009N23 gene [Source:MGI Symbol;Acc:MGI:2443491]
61. Pvrl4 Pvrl4 14 0.733 - - 0.733 - - -
62. Ormdl2 ENSMUSG00000025353 5 0.729 - - 0.729 - - - ORM1-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914094]
63. Rnf24 ENSMUSG00000048911 64 0.728 - - 0.728 - - - ring finger protein 24 [Source:MGI Symbol;Acc:MGI:1261771]
64. BC100451 15 0.727 - - 0.727 - - - cDNA sequence BC100451, transcript variant X3
65. Vwc2 ENSMUSG00000050830 16 0.724 - - 0.724 - - - von Willebrand factor C domain containing 2 [Source:MGI Symbol;Acc:MGI:2442987]
66. 2010007H06Rik ENSMUSG00000044694 25 0.722 - - - - - 0.722 RIKEN cDNA 2010007H06 gene [Source:MGI Symbol;Acc:MGI:1917099]
67. Gm14872 Gm14872 9 0.722 - - 0.722 - - -
68. Rpl31-ps18 ENSMUSG00000097719 28 0.722 - - 0.722 - - - ribosomal protein L31, pseudogene 18 [Source:MGI Symbol;Acc:MGI:3644718]
69. Zfp112 ENSMUSG00000052675 56 0.721 - - - - - 0.721 zinc finger protein 112 [Source:MGI Symbol;Acc:MGI:1929115]
70. Gm5277 ENSMUSG00000091361 18 0.721 0.721 - - - - - predicted gene 5277 [Source:MGI Symbol;Acc:MGI:3646590]
71. Bbs12 ENSMUSG00000051444 295 0.72 - - - - 0.720 - Bardet-Biedl syndrome 12 (human) [Source:MGI Symbol;Acc:MGI:2686651]
72. Gm15302 ENSMUSG00000084377 8 0.718 - - - - - 0.718 predicted gene 15302 [Source:MGI Symbol;Acc:MGI:3705638]
73. Gm25132 ENSMUSG00000064586 7 0.718 - - - - - 0.718 predicted gene, 25132 [Source:MGI Symbol;Acc:MGI:5454909]
74. Gm23563 ENSMUSG00000092641 17 0.718 - - - - - 0.718 predicted gene, 23563 [Source:MGI Symbol;Acc:MGI:5453340]
75. Gm6425 ENSMUSG00000086174 3 0.718 - - - - - 0.718 predicted pseudogene 6425 [Source:MGI Symbol;Acc:MGI:3646016]
76. Six6 ENSMUSG00000021099 3 0.718 - - - - - 0.718 sine oculis-related homeobox 6 [Source:MGI Symbol;Acc:MGI:1341840]
77. Gm12468 ENSMUSG00000083985 14 0.718 - - - - - 0.718 predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
78. Gm17435 ENSMUSG00000097000 13 0.718 - - - - - 0.718 predicted gene, 17435 [Source:MGI Symbol;Acc:MGI:4937069]
79. Gm17219 ENSMUSG00000090855 3 0.718 - - - - - 0.718 predicted gene 17219 [Source:MGI Symbol;Acc:MGI:4938046]
80. Ap5b1 ENSMUSG00000049562 25 0.718 - - 0.718 - - - adaptor-related protein complex 5, beta 1 subunit [Source:MGI Symbol;Acc:MGI:2685808]
81. Hmgxb3 ENSMUSG00000024622 6 0.718 - - - - - 0.718 HMG box domain containing 3 [Source:MGI Symbol;Acc:MGI:2441817]
82. Gm9845 ENSMUSG00000050533 6 0.718 - - - - - 0.718 predicted pseudogene 9845 [Source:MGI Symbol;Acc:MGI:3704215]
83. Ccdc169 ENSMUSG00000048655 17 0.718 - - - - - 0.718 coiled-coil domain containing 169 [Source:MGI Symbol;Acc:MGI:2444356]
84. Pah ENSMUSG00000020051 8 0.718 - - - - - 0.718 phenylalanine hydroxylase [Source:MGI Symbol;Acc:MGI:97473]
85. Izumo2 ENSMUSG00000066500 75 0.717 - - 0.717 - - - IZUMO family member 2 [Source:MGI Symbol;Acc:MGI:1922760]
86. Ifitm10 ENSMUSG00000045777 59 0.717 - - - - 0.717 - interferon induced transmembrane protein 10 [Source:MGI Symbol;Acc:MGI:2444776]
87. Gm25467 Gm25467 24 0.716 - - 0.716 - - -
88. Nupr1 ENSMUSG00000030717 13 0.716 - - 0.716 - - - nuclear protein transcription regulator 1 [Source:MGI Symbol;Acc:MGI:1891834]
89. Hist1h2ab ENSMUSG00000061615 94 0.716 - - 0.716 - - - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
90. Add2 ENSMUSG00000030000 32 0.714 - - - - - 0.714 adducin 2 (beta) [Source:MGI Symbol;Acc:MGI:87919]
91. Brd7 ENSMUSG00000031660 3673 0.713 - - - - 0.713 - bromodomain containing 7 [Source:MGI Symbol;Acc:MGI:1349766]
92. BC021891 15 0.712 - - - - - 0.712 cDNA sequence BC021891, transcript variant X1
93. Gm16386 ENSMUSG00000096975 11 0.712 - - - - - 0.712 predicted gene 16386 [Source:MGI Symbol;Acc:MGI:3646848]
94. Map3k14 ENSMUSG00000020941 155 0.712 - - - - 0.712 - mitogen-activated protein kinase kinase kinase 14 [Source:MGI Symbol;Acc:MGI:1858204]
95. 1600029D21Rik 1600029D21Rik 31 0.712 - - - - - 0.712
96. Gm24489 Gm24489 8 0.711 - - - - - 0.711
97. Pkhd1 ENSMUSG00000043760 14 0.711 - - - - - 0.711 polycystic kidney and hepatic disease 1 [Source:MGI Symbol;Acc:MGI:2155808]
98. Gm26788 ENSMUSG00000096992 3 0.711 - - - - - 0.711 predicted gene, 26788 [Source:MGI Symbol;Acc:MGI:5477282]
99. Gm14046 ENSMUSG00000084328 15 0.71 - - 0.710 - - - predicted gene 14046 [Source:MGI Symbol;Acc:MGI:3650215]
100. Gm10544 ENSMUSG00000097430 3 0.709 - - - - - 0.709 predicted gene 10544 [Source:MGI Symbol;Acc:MGI:3642892]

There are 9 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA