Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Irx4

Gene Name Gene ID Reads Annotation
Irx4 ENSMUSG00000021604 83 Iroquois homeobox 4 [Source:MGI Symbol;Acc:MGI:1355275]







Genes with expression patterns similar to Irx4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Irx4 ENSMUSG00000021604 83 6 1.000 1.000 1.000 1.000 1.000 1.000 Iroquois homeobox 4 [Source:MGI Symbol;Acc:MGI:1355275]
2. Kl ENSMUSG00000058488 6 0.844 0.844 - - - - - klotho [Source:MGI Symbol;Acc:MGI:1101771]
3. Gm16794 ENSMUSG00000097777 7 0.844 0.844 - - - - - predicted gene, 16794 [Source:MGI Symbol;Acc:MGI:4439718]
4. A230107N01Rik ENSMUSG00000097292 17 0.844 0.844 - - - - - RIKEN cDNA A230107N01 gene [Source:MGI Symbol;Acc:MGI:2445042]
5. E030010N08Rik E030010N08Rik 22 0.844 0.844 - - - - -
6. Gm11506 ENSMUSG00000080872 10 0.844 0.844 - - - - - predicted gene 11506 [Source:MGI Symbol;Acc:MGI:3650724]
7. A630031M04Rik ENSMUSG00000087470 3 0.844 0.844 - - - - - RIKEN cDNA A630031M04 gene [Source:MGI Symbol;Acc:MGI:2444470]
8. Gm11986 ENSMUSG00000087637 3 0.844 0.844 - - - - - predicted gene 11986 [Source:MGI Symbol;Acc:MGI:3650604]
9. Gm24727 ENSMUSG00000088856 1 0.844 0.844 - - - - - predicted gene, 24727 [Source:MGI Symbol;Acc:MGI:5454504]
10. Osgin1 ENSMUSG00000074063 26 0.844 0.844 - - - - - oxidative stress induced growth inhibitor 1 [Source:MGI Symbol;Acc:MGI:1919089]
11. Arl11 ENSMUSG00000043157 10 0.844 0.844 - - - - - ADP-ribosylation factor-like 11 [Source:MGI Symbol;Acc:MGI:2444054]
12. Trem1 ENSMUSG00000042265, ENSMUSG00000115982 1 0.844 0.844 - - - - - triggering receptor expressed on myeloid cells 1 [Source:MGI Symbol;Acc:MGI:1930005]
13. Slco1c1 ENSMUSG00000030235 3 0.844 0.844 - - - - - solute carrier organic anion transporter family, member 1c1 [Source:MGI Symbol;Acc:MGI:1889679]
14. Hoxa11os ENSMUSG00000086427 3 0.844 0.844 - - - - - homeobox A11, opposite strand [Source:MGI Symbol;Acc:MGI:107208]
15. Gm7672 ENSMUSG00000097086 6 0.844 0.844 - - - - - predicted gene 7672 [Source:MGI Symbol;Acc:MGI:3647232]
16. Pmis2 ENSMUSG00000049761 13 0.813 0.813 - - - - - Pmis2, sperm specific protein [Source:MGI Symbol;Acc:MGI:1922177]
17. Srp54c ENSMUSG00000079108 7 0.813 0.813 - - - - - signal recognition particle 54C [Source:MGI Symbol;Acc:MGI:3714359]
18. Fezf2 ENSMUSG00000021743 7 0.811 - - 0.811 - - - Fez family zinc finger 2 [Source:MGI Symbol;Acc:MGI:1859823]
19. BC018473 ENSMUSG00000056032 2 0.811 - - 0.811 - - - cDNA sequence BC018473 [Source:MGI Symbol;Acc:MGI:3039625]
20. Lamb3 ENSMUSG00000026639 3 0.811 - - 0.811 - - - laminin, beta 3 [Source:MGI Symbol;Acc:MGI:99915]
21. 4921508M14Rik ENSMUSG00000052376 3 0.811 - - 0.811 - - - RIKEN cDNA 4921508M14 gene [Source:MGI Symbol;Acc:MGI:1918094]
22. Gm4984 ENSMUSG00000079871 1 0.811 - - 0.811 - - - predicted pseudogene 4984 [Source:MGI Symbol;Acc:MGI:3644533]
23. Gm16618 ENSMUSG00000086837 1 0.811 - - 0.811 - - - predicted gene, 16618 [Source:MGI Symbol;Acc:MGI:4439542]
24. Gm9830 ENSMUSG00000094437 2 0.811 - - 0.811 - - - predicted gene 9830 [Source:MGI Symbol;Acc:MGI:3704332]
25. Gm11652 ENSMUSG00000083465 13 0.811 - - 0.811 - - - predicted gene 11652 [Source:MGI Symbol;Acc:MGI:3651204]
26. Fer1l4 ENSMUSG00000013338 2 0.811 - - 0.811 - - - fer-1-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:1921812]
27. 1700125H20Rik ENSMUSG00000018479 5 0.811 - - 0.811 - - - RIKEN cDNA 1700125H20 gene [Source:MGI Symbol;Acc:MGI:1920884]
28. Gm21747 Gm21747 4 0.811 - - 0.811 - - -
29. Neurod2 ENSMUSG00000038255 13 0.811 - - 0.811 - - - neurogenic differentiation 2 [Source:MGI Symbol;Acc:MGI:107755]
30. Rny1 ENSMUSG00000065701 18 0.811 - - 0.811 - - - RNA, Y1 small cytoplasmic, Ro-associated [Source:MGI Symbol;Acc:MGI:97995]
31. Gm3752 ENSMUSG00000091617 1 0.811 - - 0.811 - - - predicted gene 3752 [Source:MGI Symbol;Acc:MGI:3781927]
32. Ppp1r27 ENSMUSG00000025129 4 0.811 - - 0.811 - - - protein phosphatase 1, regulatory subunit 27 [Source:MGI Symbol;Acc:MGI:1915951]
33. Gm17276 ENSMUSG00000097305 2 0.811 - - 0.811 - - - predicted gene, 17276 [Source:MGI Symbol;Acc:MGI:4936910]
34. Rpl21-ps11 ENSMUSG00000105144 1 0.811 - - 0.811 - - - ribosomal protein L21, pseudogene 11 [Source:MGI Symbol;Acc:MGI:3648207]
35. Gm21786 Gm21786 0 0.811 - - 0.811 - - -
36. Myrfl ENSMUSG00000034057 6 0.811 - - 0.811 - - - myelin regulatory factor-like [Source:MGI Symbol;Acc:MGI:2685085]
37. 4933411K16Rik ENSMUSG00000090369 2 0.811 - - 0.811 - - - RIKEN cDNA 4933411K16 gene [Source:MGI Symbol;Acc:MGI:1914015]
38. Zfp750 ENSMUSG00000039238 6 0.811 - - 0.811 - - - zinc finger protein 750 [Source:MGI Symbol;Acc:MGI:2442210]
39. Rps8-ps1 ENSMUSG00000071303 30 0.811 - - 0.811 - - - ribosomal protein S8, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3647445]
40. Gm16288 ENSMUSG00000085099 7 0.811 - - 0.811 - - - predicted gene 16288 [Source:MGI Symbol;Acc:MGI:3826608]
41. Gm12760 ENSMUSG00000083434 41 0.811 - - 0.811 - - - predicted gene 12760 [Source:MGI Symbol;Acc:MGI:3649974]
42. Gm11232 ENSMUSG00000066141 3 0.811 - - 0.811 - - - predicted gene 11232 [Source:MGI Symbol;Acc:MGI:3651439]
43. Gm11713 ENSMUSG00000085245 5 0.811 - - 0.811 - - - predicted gene 11713 [Source:MGI Symbol;Acc:MGI:3652139]
44. Trim5 ENSMUSG00000060441 4 0.811 - - 0.811 - - - tripartite motif-containing 5 [Source:MGI Symbol;Acc:MGI:3646853]
45. Gm26673 ENSMUSG00000097596 0 0.811 - - 0.811 - - - predicted gene, 26673 [Source:MGI Symbol;Acc:MGI:5477167]
46. BC051019 ENSMUSG00000031022 1 0.811 - - 0.811 - - - cDNA sequence BC051019 [Source:MGI Symbol;Acc:MGI:1928824]
47. Mir5113 ENSMUSG00000092868 0 0.811 - - 0.811 - - - microRNA 5113 [Source:MGI Symbol;Acc:MGI:4950433]
48. Gm10521 ENSMUSG00000073492 0 0.811 - - 0.811 - - - predicted gene 10521 [Source:MGI Symbol;Acc:MGI:3642358]
49. 1700081H22Rik 1700081H22Rik 0 0.811 - - 0.811 - - -
50. Gm15422 ENSMUSG00000082738 1 0.811 - - 0.811 - - - predicted gene 15422 [Source:MGI Symbol;Acc:MGI:3707362]
51. 5430421N21Rik 5430421N21Rik 0 0.811 - - 0.811 - - -
52. Gm1305 2 0.811 - - 0.811 - - - predicted gene 1305
53. Gm26612 ENSMUSG00000097676 1 0.811 - - 0.811 - - - predicted gene, 26612 [Source:MGI Symbol;Acc:MGI:5477106]
54. Yipf7 ENSMUSG00000029158 4 0.811 - - 0.811 - - - Yip1 domain family, member 7 [Source:MGI Symbol;Acc:MGI:1922831]
55. Gm25945 ENSMUSG00000084433 1 0.811 - - 0.811 - - - predicted gene, 25945 [Source:MGI Symbol;Acc:MGI:5455722]
56. Gm5939 ENSMUSG00000083258 7 0.811 - - 0.811 - - - predicted pseudogene 5939 [Source:MGI Symbol;Acc:MGI:3648845]
57. Ch25h ENSMUSG00000050370 12 0.811 - - 0.811 - - - cholesterol 25-hydroxylase [Source:MGI Symbol;Acc:MGI:1333869]
58. 4930486L24Rik ENSMUSG00000050345 1 0.805 - - 0.805 - - - RIKEN cDNA 4930486L24 gene [Source:MGI Symbol;Acc:MGI:1922258]
59. Gm10735 ENSMUSG00000074650 18 0.805 - - 0.805 - - - predicted gene 10735 [Source:MGI Symbol;Acc:MGI:3642476]
60. 1520401A03Rik ENSMUSG00000043747 9 0.805 - - 0.805 - - - RIKEN cDNA 1520401A03 gene [Source:MGI Symbol;Acc:MGI:2443785]
61. Gm17415 ENSMUSG00000090489 5 0.805 - - 0.805 - - - predicted gene, 17415 [Source:MGI Symbol;Acc:MGI:4937049]
62. Gm16314 Gm16314 3 0.805 - - 0.805 - - -
63. C5ar1 ENSMUSG00000049130 24 0.801 0.801 - - - - - complement component 5a receptor 1 [Source:MGI Symbol;Acc:MGI:88232]
64. Mpc1-ps ENSMUSG00000091498 37 0.797 0.797 - - - - - mitochondrial pyruvate carrier 1, pseudogene [Source:MGI Symbol;Acc:MGI:3781628]
65. Gm12057 ENSMUSG00000084081 4 0.797 - - 0.797 - - - predicted gene 12057 [Source:MGI Symbol;Acc:MGI:3650030]
66. Alox5 ENSMUSG00000025701 18 0.797 - - 0.797 - - - arachidonate 5-lipoxygenase [Source:MGI Symbol;Acc:MGI:87999]
67. Gm15503 ENSMUSG00000084964 2 0.793 0.793 - - - - - predicted gene 15503 [Source:MGI Symbol;Acc:MGI:3782950]
68. Gm12359 ENSMUSG00000075576 22 0.793 0.793 - - - - - predicted gene 12359 [Source:MGI Symbol;Acc:MGI:3702436]
69. Gm15844 ENSMUSG00000084126 2 0.779 0.779 - - - - - predicted gene 15844 [Source:MGI Symbol;Acc:MGI:3802079]
70. Gm25363 ENSMUSG00000089475 4 0.779 0.779 - - - - - predicted gene, 25363 [Source:MGI Symbol;Acc:MGI:5455140]
71. Gm17705 ENSMUSG00000090936 11 0.774 0.774 - - - - - predicted gene, 17705 [Source:MGI Symbol;Acc:MGI:4937339]
72. H2-DMa ENSMUSG00000037649 25 0.773 0.773 - - - - - histocompatibility 2, class II, locus DMa [Source:MGI Symbol;Acc:MGI:95921]
73. Apoc1 ENSMUSG00000040564 43 0.772 0.772 - - - - - apolipoprotein C-I [Source:MGI Symbol;Acc:MGI:88053]
74. Ttll10 ENSMUSG00000029074 3 0.77 0.770 - - - - - tubulin tyrosine ligase-like family, member 10 [Source:MGI Symbol;Acc:MGI:1921855]
75. Tldc1 ENSMUSG00000034105 8 0.77 0.770 - - - - - TBC/LysM associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1921597]
76. Fam187a ENSMUSG00000075510 5 0.77 0.770 - - - - - family with sequence similarity 187, member A [Source:MGI Symbol;Acc:MGI:1914034]
77. Gm10715 ENSMUSG00000096201 18 0.77 0.770 - - - - - predicted gene 10715 [Source:MGI Symbol;Acc:MGI:3642376]
78. Sptssb ENSMUSG00000043461 113 0.77 0.770 - - - - - serine palmitoyltransferase, small subunit B [Source:MGI Symbol;Acc:MGI:1913433]
79. St8sia6 ENSMUSG00000003418 61 0.756 0.756 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:2386797]
80. P2rx7 ENSMUSG00000029468 35 0.754 0.754 - - - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:MGI Symbol;Acc:MGI:1339957]
81. 4930524L23Rik 4930524L23Rik 18 0.751 0.751 - - - - -
82. Gm17618 Gm17618 44 0.75 - - 0.750 - - -
83. Ip6k3 ENSMUSG00000024210 3 0.75 - - 0.750 - - - inositol hexaphosphate kinase 3 [Source:MGI Symbol;Acc:MGI:3045325]
84. Gm13653 ENSMUSG00000075276 6 0.746 0.746 - - - - - predicted gene 13653 [Source:MGI Symbol;Acc:MGI:3649358]
85. Cd274 ENSMUSG00000016496 7 0.745 - - 0.745 - - - CD274 antigen [Source:MGI Symbol;Acc:MGI:1926446]
86. Rln1 ENSMUSG00000039097 15 0.745 - - 0.745 - - - relaxin 1 [Source:MGI Symbol;Acc:MGI:97931]
87. Cpne7 ENSMUSG00000034796 49 0.743 - - 0.743 - - - copine VII [Source:MGI Symbol;Acc:MGI:2142747]
88. Gm6153 ENSMUSG00000090994 31 0.737 0.737 - - - - - predicted gene 6153 [Source:MGI Symbol;Acc:MGI:3645798]
89. Ecm2 ENSMUSG00000043631 7 0.736 0.736 - - - - - extracellular matrix protein 2, female organ and adipocyte specific [Source:MGI Symbol;Acc:MGI:3039578]
90. Gm11686 ENSMUSG00000080711 10 0.732 0.732 - - - - - predicted gene 11686 [Source:MGI Symbol;Acc:MGI:3652311]
91. Gm21960 ENSMUSG00000095836 47 0.728 0.728 - - - - - predicted gene, 21960 [Source:MGI Symbol;Acc:MGI:5439429]
92. Ccdc169 ENSMUSG00000048655 17 0.723 0.723 - - - - - coiled-coil domain containing 169 [Source:MGI Symbol;Acc:MGI:2444356]
93. Ptprcap ENSMUSG00000045826, ENSMUSG00000097132 54 0.722 0.722 - - - - - protein tyrosine phosphatase, receptor type, C polypeptide-associated protein [Source:MGI Symbol;Acc:MGI:97811]
94. 4632433K11Rik ENSMUSG00000116184 14 0.719 - - 0.719 - - - RIKEN cDNA 4632433K11 gene [Source:MGI Symbol;Acc:MGI:1924293]
95. Spt1 Spt1 55 0.718 0.718 - - - - -
96. Gm27042 ENSMUSG00000097792 33 0.716 0.716 - - - - - predicted gene, 27042 [Source:MGI Symbol;Acc:MGI:5504157]
97. Gm17203 ENSMUSG00000090965 10 0.714 0.714 - - - - - predicted gene 17203 [Source:MGI Symbol;Acc:MGI:4938030]
98. Itga2 ENSMUSG00000015533 22 0.713 0.713 - - - - - integrin alpha 2 [Source:MGI Symbol;Acc:MGI:96600]
99. C8g ENSMUSG00000015083 11 0.707 - - 0.707 - - - complement component 8, gamma polypeptide [Source:MGI Symbol;Acc:MGI:88237]
100. Tmem145 ENSMUSG00000043843 45 0.706 0.706 - - - - - transmembrane protein 145 [Source:MGI Symbol;Acc:MGI:3607779]

There are 4 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA