Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Irx3

Gene Name Gene ID Reads Annotation
Irx3 ENSMUSG00000031734 610 Iroquois related homeobox 3 [Source:MGI Symbol;Acc:MGI:1197522]







Genes with expression patterns similar to Irx3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Irx3 ENSMUSG00000031734 610 6 1.000 1.000 1.000 1.000 1.000 1.000 Iroquois related homeobox 3 [Source:MGI Symbol;Acc:MGI:1197522]
2. Hus1 ENSMUSG00000020413 906 0.957 - - - - 0.957 - HUS1 checkpoint clamp component [Source:MGI Symbol;Acc:MGI:1277962]
3. Cwf19l1 ENSMUSG00000025200 775 0.956 - - - - 0.956 - CWF19-like 1, cell cycle control (S. pombe) [Source:MGI Symbol;Acc:MGI:1919752]
4. Acsf3 ENSMUSG00000015016 692 0.955 - - - - 0.955 - acyl-CoA synthetase family member 3 [Source:MGI Symbol;Acc:MGI:2182591]
5. Fbxl19 ENSMUSG00000030811 233 0.955 - - - - 0.955 - F-box and leucine-rich repeat protein 19 [Source:MGI Symbol;Acc:MGI:3039600]
6. Zdhhc7 ENSMUSG00000031823 628 0.954 - - - - 0.954 - zinc finger, DHHC domain containing 7 [Source:MGI Symbol;Acc:MGI:2142662]
7. Gm11975 ENSMUSG00000084231 70 0.954 - - - - 0.954 - predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
8. Il18bp ENSMUSG00000070427 230 0.954 - - - - 0.954 - interleukin 18 binding protein [Source:MGI Symbol;Acc:MGI:1333800]
9. Gm13775 ENSMUSG00000081207 54 0.954 - - - - 0.954 - predicted gene 13775 [Source:MGI Symbol;Acc:MGI:3712466]
10. B130046B21Rik ENSMUSG00000097414 59 0.954 - - - - 0.954 - RIKEN cDNA B130046B21 gene [Source:MGI Symbol;Acc:MGI:3704458]
11. Parp3 ENSMUSG00000023249 110 0.954 - - - - 0.954 - poly (ADP-ribose) polymerase family, member 3 [Source:MGI Symbol;Acc:MGI:1891258]
12. Mzf1 ENSMUSG00000030380 234 0.953 - - - - 0.953 - myeloid zinc finger 1 [Source:MGI Symbol;Acc:MGI:107457]
13. Gm17414 Gm17414 131 0.953 - - - - 0.953 -
14. D030055H07Rik ENSMUSG00000086296 161 0.953 - - - - 0.953 - RIKEN cDNA D030055H07 gene [Source:MGI Symbol;Acc:MGI:3605036]
15. Tmem243 ENSMUSG00000079659 181 0.953 - - - - 0.953 - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
16. Skint8 ENSMUSG00000078599 109 0.953 - - - - 0.953 - selection and upkeep of intraepithelial T cells 8 [Source:MGI Symbol;Acc:MGI:3651523]
17. Gm8757 ENSMUSG00000084125 112 0.952 - - - - 0.952 - predicted gene 8757 [Source:MGI Symbol;Acc:MGI:3644342]
18. Phkg1 ENSMUSG00000025537 65 0.952 - - - - 0.952 - phosphorylase kinase gamma 1 [Source:MGI Symbol;Acc:MGI:97579]
19. Gstt1 ENSMUSG00000001663 158 0.95 - - - - 0.950 - glutathione S-transferase, theta 1 [Source:MGI Symbol;Acc:MGI:107379]
20. Rpl35a ENSMUSG00000060636 411 0.949 - - - - 0.949 - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
21. Zfp354a ENSMUSG00000020364 242 0.949 - - - - 0.949 - zinc finger protein 354A [Source:MGI Symbol;Acc:MGI:103172]
22. Rassf7 ENSMUSG00000038618 391 0.948 - - - - 0.948 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 [Source:MGI Symbol;Acc:MGI:1914235]
23. Gm5117 ENSMUSG00000093862 197 0.948 - - - - 0.948 - predicted gene 5117 [Source:MGI Symbol;Acc:MGI:3648041]
24. Slc25a53 ENSMUSG00000044348 516 0.948 - - - - 0.948 - solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
25. Foxm1 ENSMUSG00000001517 1628 0.948 - - - - 0.948 - forkhead box M1 [Source:MGI Symbol;Acc:MGI:1347487]
26. Atad2b ENSMUSG00000052812 434 0.947 - - - - 0.947 - ATPase family, AAA domain containing 2B [Source:MGI Symbol;Acc:MGI:2444798]
27. Ankrd42 ENSMUSG00000041343 120 0.947 - - - - 0.947 - ankyrin repeat domain 42 [Source:MGI Symbol;Acc:MGI:1921095]
28. Evi5l ENSMUSG00000011832 691 0.946 - - - - 0.946 - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
29. AW146154 ENSMUSG00000074166 587 0.946 - - - - 0.946 - expressed sequence AW146154 [Source:MGI Symbol;Acc:MGI:2142212]
30. Gm9864 ENSMUSG00000052005 829 0.945 - - - - 0.945 - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
31. Rabggta ENSMUSG00000040472 395 0.945 - - - - 0.945 - Rab geranylgeranyl transferase, a subunit [Source:MGI Symbol;Acc:MGI:1860443]
32. Bai3 Bai3 552 0.944 - - - - 0.944 -
33. Dpp8 ENSMUSG00000032393 1163 0.943 - - - - 0.943 - dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
34. Coil ENSMUSG00000033983 461 0.943 - - - - 0.943 - coilin [Source:MGI Symbol;Acc:MGI:104842]
35. Slc25a14 ENSMUSG00000031105 506 0.941 - - - - 0.941 - solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:MGI Symbol;Acc:MGI:1330823]
36. Chrna4 ENSMUSG00000027577 941 0.94 - - - - 0.940 - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
37. Rpl21-ps14 ENSMUSG00000062152 770 0.939 - - - - 0.939 - ribosomal protein L21, pseudogene 14 [Source:MGI Symbol;Acc:MGI:3648110]
38. 4933431E20Rik ENSMUSG00000086968 381 0.939 - - - - 0.939 - RIKEN cDNA 4933431E20 gene [Source:MGI Symbol;Acc:MGI:3584041]
39. Mrc2 ENSMUSG00000020695 1135 0.939 - - - - 0.939 - mannose receptor, C type 2 [Source:MGI Symbol;Acc:MGI:107818]
40. Man2b1 ENSMUSG00000005142 864 0.938 - - - - 0.938 - mannosidase 2, alpha B1 [Source:MGI Symbol;Acc:MGI:107286]
41. Abcg4 ENSMUSG00000032131 186 0.937 - - - - 0.937 - ATP binding cassette subfamily G member 4 [Source:MGI Symbol;Acc:MGI:1890594]
42. Dclre1a ENSMUSG00000025077 675 0.937 - - - - 0.937 - DNA cross-link repair 1A [Source:MGI Symbol;Acc:MGI:1930042]
43. Tpmt ENSMUSG00000021376 544 0.937 - - - - 0.937 - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
44. C030037D09Rik ENSMUSG00000087574 291 0.937 - - - - 0.937 - RIKEN cDNA C030037D09 gene [Source:MGI Symbol;Acc:MGI:1924865]
45. Robo3 ENSMUSG00000032128 389 0.936 - - - - 0.936 - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
46. Ppm1e ENSMUSG00000046442 270 0.936 - - - - 0.936 - protein phosphatase 1E (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2444096]
47. Bcs1l ENSMUSG00000026172 2289 0.936 - - - - 0.936 - BCS1-like (yeast) [Source:MGI Symbol;Acc:MGI:1914071]
48. Klhl12 ENSMUSG00000026455 1454 0.935 - - - - 0.935 - kelch-like 12 [Source:MGI Symbol;Acc:MGI:2385619]
49. Cxcl5 ENSMUSG00000029371 85 0.935 - - - - 0.935 - chemokine (C-X-C motif) ligand 5 [Source:MGI Symbol;Acc:MGI:1096868]
50. Nin ENSMUSG00000021068 2735 0.935 - - - - 0.935 - ninein [Source:MGI Symbol;Acc:MGI:105108]
51. Nudt11 ENSMUSG00000073295 757 0.934 - - - - 0.934 - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
52. Uckl1 ENSMUSG00000089917 375 0.934 - - - - 0.934 - uridine-cytidine kinase 1-like 1 [Source:MGI Symbol;Acc:MGI:1915806]
53. B3galt1 ENSMUSG00000034780 267 0.933 - - - - 0.933 - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1349403]
54. Mir296 ENSMUSG00000065521 1110 0.933 - - - - 0.933 - microRNA 296 [Source:MGI Symbol;Acc:MGI:3619269]
55. Adamts15 ENSMUSG00000033453 215 0.933 - - - - 0.933 - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 15 [Source:MGI Symbol;Acc:MGI:2449569]
56. Wdr34 ENSMUSG00000039715 422 0.933 - - - - 0.933 - WD repeat domain 34 [Source:MGI Symbol;Acc:MGI:1919070]
57. Mark4 ENSMUSG00000030397 335 0.933 - - - - 0.933 - MAP/microtubule affinity regulating kinase 4 [Source:MGI Symbol;Acc:MGI:1920955]
58. Hoxb1 ENSMUSG00000018973 357 0.932 - - - - 0.932 - homeobox B1 [Source:MGI Symbol;Acc:MGI:96182]
59. Nup98 ENSMUSG00000063550 482 0.932 - - - - 0.932 - nucleoporin 98 [Source:MGI Symbol;Acc:MGI:109404]
60. Ppib ENSMUSG00000032383 722 0.932 - - - - 0.932 - peptidylprolyl isomerase B [Source:MGI Symbol;Acc:MGI:97750]
61. Gm22906 ENSMUSG00000092932 830 0.931 - - - - 0.931 - predicted gene, 22906 [Source:MGI Symbol;Acc:MGI:5452683]
62. Dennd4c ENSMUSG00000038024 349 0.93 - - - - 0.930 - DENN/MADD domain containing 4C [Source:MGI Symbol;Acc:MGI:1914769]
63. Phf13 ENSMUSG00000047777 1255 0.929 - - - - 0.929 - PHD finger protein 13 [Source:MGI Symbol;Acc:MGI:2446217]
64. Ccnt1 ENSMUSG00000011960 4338 0.929 - - - - 0.929 - cyclin T1 [Source:MGI Symbol;Acc:MGI:1328363]
65. Gm9816 ENSMUSG00000085783 533 0.929 - - - - 0.929 - predicted pseudogene 9816 [Source:MGI Symbol;Acc:MGI:3704465]
66. Tmed5 ENSMUSG00000063406 1386 0.929 - - - - 0.929 - transmembrane p24 trafficking protein 5 [Source:MGI Symbol;Acc:MGI:1921586]
67. Gm4799 ENSMUSG00000071151 808 0.928 - - - - 0.928 - predicted gene 4799 [Source:MGI Symbol;Acc:MGI:3648850]
68. Cdca3 ENSMUSG00000023505 4570 0.928 - - - - 0.928 - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
69. Klf4 ENSMUSG00000003032 309 0.928 - - - - 0.928 - Kruppel-like factor 4 (gut) [Source:MGI Symbol;Acc:MGI:1342287]
70. Ddhd2 ENSMUSG00000061313 716 0.927 - - - - 0.927 - DDHD domain containing 2 [Source:MGI Symbol;Acc:MGI:1919358]
71. Cdc25b ENSMUSG00000027330 1004 0.927 - - - - 0.927 - cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
72. Slitrk2 ENSMUSG00000036790 364 0.926 - - - - 0.926 - SLIT and NTRK-like family, member 2 [Source:MGI Symbol;Acc:MGI:2679449]
73. Fgf13 ENSMUSG00000031137 365 0.925 - - - - 0.925 - fibroblast growth factor 13 [Source:MGI Symbol;Acc:MGI:109178]
74. Zfp536 ENSMUSG00000043456 869 0.925 - - - - 0.925 - zinc finger protein 536 [Source:MGI Symbol;Acc:MGI:1926102]
75. Jmjd4 ENSMUSG00000036819 851 0.925 - - - - 0.925 - jumonji domain containing 4 [Source:MGI Symbol;Acc:MGI:2144404]
76. Slc4a1 ENSMUSG00000006574 348 0.925 - - - - 0.925 - solute carrier family 4 (anion exchanger), member 1 [Source:MGI Symbol;Acc:MGI:109393]
77. Fgf5 ENSMUSG00000029337 249 0.924 - - - - 0.924 - fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
78. Tbc1d9 ENSMUSG00000031709 688 0.923 - - - - 0.923 - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
79. Atad5 ENSMUSG00000017550 1343 0.923 - - - - 0.923 - ATPase family, AAA domain containing 5 [Source:MGI Symbol;Acc:MGI:2442925]
80. Gm9531 ENSMUSG00000079225 629 0.923 - - - - 0.923 - predicted gene 9531 [Source:MGI Symbol;Acc:MGI:3779940]
81. Exoc8 ENSMUSG00000074030 1106 0.922 - - - - 0.922 - exocyst complex component 8 [Source:MGI Symbol;Acc:MGI:2142527]
82. Alg2 ENSMUSG00000039740 4275 0.922 - - - - 0.922 - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:MGI Symbol;Acc:MGI:1914731]
83. Zswim1 ENSMUSG00000017764 460 0.922 - - - - 0.922 - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
84. Srbd1 ENSMUSG00000024135 926 0.922 - - - - 0.922 - S1 RNA binding domain 1 [Source:MGI Symbol;Acc:MGI:1925836]
85. Gm6807 ENSMUSG00000057605 479 0.92 - - - - 0.920 - predicted gene 6807 [Source:MGI Symbol;Acc:MGI:3649145]
86. Pde7a ENSMUSG00000069094 2633 0.919 - - - - 0.919 - phosphodiesterase 7A [Source:MGI Symbol;Acc:MGI:1202402]
87. Pigs ENSMUSG00000041958 765 0.918 - - - - 0.918 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:MGI Symbol;Acc:MGI:2687325]
88. Lmf2 ENSMUSG00000022614 676 0.917 - - - - 0.917 - lipase maturation factor 2 [Source:MGI Symbol;Acc:MGI:2146015]
89. Zfp408 ENSMUSG00000075040 534 0.917 - - - - 0.917 - zinc finger protein 408 [Source:MGI Symbol;Acc:MGI:2685857]
90. Zfp40 ENSMUSG00000002617 724 0.916 - - - - 0.916 - zinc finger protein 40 [Source:MGI Symbol;Acc:MGI:99185]
91. Arhgap19 ENSMUSG00000025154 755 0.916 - - - - 0.916 - Rho GTPase activating protein 19 [Source:MGI Symbol;Acc:MGI:1918335]
92. Zfp870 ENSMUSG00000095325 544 0.915 - - - - 0.915 - zinc finger protein 870 [Source:MGI Symbol;Acc:MGI:3029586]
93. Rcc1 ENSMUSG00000028896 1352 0.913 - - - - 0.913 - regulator of chromosome condensation 1 [Source:MGI Symbol;Acc:MGI:1913989]
94. Lgalsl ENSMUSG00000042363 1207 0.913 - - - - 0.913 - lectin, galactoside binding-like [Source:MGI Symbol;Acc:MGI:1916114]
95. Snapc5 ENSMUSG00000032398 433 0.913 - - - - 0.913 - small nuclear RNA activating complex, polypeptide 5 [Source:MGI Symbol;Acc:MGI:1914282]
96. Wdr76 ENSMUSG00000027242 1591 0.911 - - - - 0.911 - WD repeat domain 76 [Source:MGI Symbol;Acc:MGI:1926186]
97. Arnt ENSMUSG00000015522 777 0.91 - - - - 0.910 - aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
98. Ddx26b 1085 0.91 - - - - 0.910 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X2
99. Casz1 ENSMUSG00000028977 921 0.908 - - - - 0.908 - castor zinc finger 1 [Source:MGI Symbol;Acc:MGI:1196251]
100. Chchd6 ENSMUSG00000030086 835 0.908 - - - - 0.908 - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:MGI Symbol;Acc:MGI:1913348]

There are 402 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA