Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Irx1

Gene Name Gene ID Reads Annotation
Irx1 ENSMUSG00000060969 545 Iroquois homeobox 1 [Source:MGI Symbol;Acc:MGI:1197515]







Genes with expression patterns similar to Irx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Irx1 ENSMUSG00000060969 545 6 1.000 1.000 1.000 1.000 1.000 1.000 Iroquois homeobox 1 [Source:MGI Symbol;Acc:MGI:1197515]
2. Rims3 ENSMUSG00000032890 146 0.854 - 0.854 - - - - regulating synaptic membrane exocytosis 3 [Source:MGI Symbol;Acc:MGI:2443331]
3. Pax1 ENSMUSG00000037034 2297 0.815 - - - - 0.815 - paired box 1 [Source:MGI Symbol;Acc:MGI:97485]
4. Arg1 ENSMUSG00000019987 923 0.808 - - 0.808 - - - arginase, liver [Source:MGI Symbol;Acc:MGI:88070]
5. Nat8l ENSMUSG00000048142 281 0.803 - - 0.803 - - - N-acetyltransferase 8-like [Source:MGI Symbol;Acc:MGI:2447776]
6. Zkscan4 ENSMUSG00000054931 269 0.783 - - 0.783 - - - zinc finger with KRAB and SCAN domains 4 [Source:MGI Symbol;Acc:MGI:3649412]
7. Neurog1 ENSMUSG00000048904 327 0.782 - - 0.782 - - - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
8. Ckb ENSMUSG00000001270 8443 0.772 0.772 - - - - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
9. Cp ENSMUSG00000003617 98 0.769 - - 0.769 - - - ceruloplasmin [Source:MGI Symbol;Acc:MGI:88476]
10. Ptf1a ENSMUSG00000026735 35 0.758 - 0.758 - - - - pancreas specific transcription factor, 1a [Source:MGI Symbol;Acc:MGI:1328312]
11. Klhl15 ENSMUSG00000043929 453 0.757 - - 0.757 - - - kelch-like 15 [Source:MGI Symbol;Acc:MGI:1923400]
12. Slain1 ENSMUSG00000055717 237 0.757 0.757 - - - - - SLAIN motif family, member 1 [Source:MGI Symbol;Acc:MGI:2145578]
13. Gm4675 ENSMUSG00000090534 50 0.756 - - 0.756 - - - predicted gene 4675 [Source:MGI Symbol;Acc:MGI:3782856]
14. Tob1 ENSMUSG00000037573 345 0.75 - - 0.750 - - - transducer of ErbB-2.1 [Source:MGI Symbol;Acc:MGI:1349721]
15. Syt13 ENSMUSG00000027220 679 0.749 - - 0.749 - - - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
16. Slc25a33 ENSMUSG00000028982 440 0.748 - - 0.748 - - - solute carrier family 25, member 33 [Source:MGI Symbol;Acc:MGI:1917806]
17. Prss34 ENSMUSG00000056399 33 0.747 - - - - 0.747 - protease, serine 34 [Source:MGI Symbol;Acc:MGI:2681414]
18. Pbld1 ENSMUSG00000112129 727 0.745 - - 0.745 - - - phenazine biosynthesis-like protein domain containing 1 [Source:MGI Symbol;Acc:MGI:1915621]
19. Rnaseh2c ENSMUSG00000024925 2015 0.744 - - 0.744 - - - ribonuclease H2, subunit C [Source:MGI Symbol;Acc:MGI:1915459]
20. Ost4 ENSMUSG00000038803 2709 0.744 - - 0.744 - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:MGI Symbol;Acc:MGI:1914945]
21. Mtap7d3 90 0.743 - - 0.743 - - - MAP7 domain containing 3, transcript variant X3
22. Meox2 ENSMUSG00000036144 343 0.742 - - 0.742 - - - mesenchyme homeobox 2 [Source:MGI Symbol;Acc:MGI:103219]
23. Tbce ENSMUSG00000039233 376 0.741 - - 0.741 - - - tubulin-specific chaperone E [Source:MGI Symbol;Acc:MGI:1917680]
24. Atp6v0e2 ENSMUSG00000039347 381 0.736 0.736 - - - - - ATPase, H+ transporting, lysosomal V0 subunit E2 [Source:MGI Symbol;Acc:MGI:1923502]
25. Slitrk1 ENSMUSG00000075478 48 0.736 - - 0.736 - - - SLIT and NTRK-like family, member 1 [Source:MGI Symbol;Acc:MGI:2679446]
26. Lfng ENSMUSG00000029570 386 0.736 - - 0.736 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095413]
27. 6720416L17Rik 6720416L17Rik 100 0.733 - - 0.733 - - -
28. Dpysl5 ENSMUSG00000029168 2096 0.733 0.733 - - - - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
29. Nrarp ENSMUSG00000078202 1708 0.733 0.733 - - - - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
30. Pcdha2 ENSMUSG00000104148 246 0.732 - - 0.732 - - - protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
31. Col22a1 ENSMUSG00000079022 290 0.731 - - 0.731 - - - collagen, type XXII, alpha 1 [Source:MGI Symbol;Acc:MGI:1916950]
32. Robo3 ENSMUSG00000032128 389 0.731 - 0.731 - - - - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
33. Ntn1 ENSMUSG00000020902 1175 0.731 - - - - 0.731 - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
34. Asic2 ENSMUSG00000020704 96 0.73 - - 0.730 - - - acid-sensing (proton-gated) ion channel 2 [Source:MGI Symbol;Acc:MGI:1100867]
35. Rrp12 ENSMUSG00000035049 422 0.729 - - 0.729 - - - ribosomal RNA processing 12 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2147437]
36. Slc16a14 ENSMUSG00000026220 162 0.729 - - 0.729 - - - solute carrier family 16 (monocarboxylic acid transporters), member 14 [Source:MGI Symbol;Acc:MGI:1919031]
37. 2010110K18Rik ENSMUSG00000097755 62 0.728 - - 0.728 - - - RIKEN cDNA 2010110K18 gene [Source:MGI Symbol;Acc:MGI:1922951]
38. Gabarapl2 ENSMUSG00000031950 4625 0.727 - - 0.727 - - - gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1890602]
39. Kif5c ENSMUSG00000026764 1283 0.726 - - 0.726 - - - kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
40. Scamp5 ENSMUSG00000040722 166 0.726 - - 0.726 - - - secretory carrier membrane protein 5 [Source:MGI Symbol;Acc:MGI:1928948]
41. Aldh1l2 ENSMUSG00000020256 106 0.726 - - 0.726 - - - aldehyde dehydrogenase 1 family, member L2 [Source:MGI Symbol;Acc:MGI:2444680]
42. Gm6498 ENSMUSG00000063885 41 0.726 - - 0.726 - - - predicted gene 6498 [Source:MGI Symbol;Acc:MGI:3647773]
43. Gm16581 ENSMUSG00000089670 490 0.724 - - 0.724 - - - predicted gene 16581 [Source:MGI Symbol;Acc:MGI:4415001]
44. Elavl2 ENSMUSG00000008489 2109 0.723 - - 0.723 - - - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
45. Medag ENSMUSG00000029659 58 0.723 - - 0.723 - - - mesenteric estrogen dependent adipogenesis [Source:MGI Symbol;Acc:MGI:1917967]
46. Uncx ENSMUSG00000029546 4593 0.723 - - - - - 0.723 UNC homeobox [Source:MGI Symbol;Acc:MGI:108013]
47. 4933436C20Rik 4933436C20Rik 653 0.723 - - 0.723 - - -
48. Nabp2 ENSMUSG00000025374 4703 0.723 - - 0.723 - - - nucleic acid binding protein 2 [Source:MGI Symbol;Acc:MGI:1917167]
49. Nrsn1 ENSMUSG00000048978 111 0.722 - - 0.722 - - - neurensin 1 [Source:MGI Symbol;Acc:MGI:894662]
50. 2310033P09Rik ENSMUSG00000020441 1138 0.721 - - 0.721 - - - RIKEN cDNA 2310033P09 gene [Source:MGI Symbol;Acc:MGI:1915112]
51. Pdxk ENSMUSG00000032788 1216 0.721 - - 0.721 - - - pyridoxal (pyridoxine, vitamin B6) kinase [Source:MGI Symbol;Acc:MGI:1351869]
52. Ndst3 ENSMUSG00000027977 145 0.721 - - 0.721 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:MGI Symbol;Acc:MGI:1932544]
53. C730034F03Rik ENSMUSG00000079242 111 0.72 - - 0.720 - - - RIKEN cDNA C730034F03 gene [Source:MGI Symbol;Acc:MGI:2441921]
54. 4930563E22Rik ENSMUSG00000053574 111 0.72 - - 0.720 - - - RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
55. AF357399 ENSMUSG00000077711 68 0.719 - - 0.719 - - - snoRNA AF357399 [Source:MGI Symbol;Acc:MGI:5439844]
56. Tmem200a ENSMUSG00000049420 604 0.719 - - 0.719 - - - transmembrane protein 200A [Source:MGI Symbol;Acc:MGI:1924470]
57. Qpct ENSMUSG00000024084 41 0.718 - - 0.718 - - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) [Source:MGI Symbol;Acc:MGI:1917786]
58. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 0.718 - - 0.718 - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
59. Sox3 ENSMUSG00000045179 1137 0.717 0.717 - - - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
60. Gm9432 ENSMUSG00000083199 20 0.716 - - 0.716 - - - predicted gene 9432 [Source:MGI Symbol;Acc:MGI:3648371]
61. Rpusd1 ENSMUSG00000041199 821 0.714 - - 0.714 - - - RNA pseudouridylate synthase domain containing 1 [Source:MGI Symbol;Acc:MGI:1919186]
62. Kat5 ENSMUSG00000024926 26 0.713 - - 0.713 - - - K(lysine) acetyltransferase 5 [Source:MGI Symbol;Acc:MGI:1932051]
63. Gm16183 ENSMUSG00000086067 61 0.713 - - 0.713 - - - predicted gene 16183 [Source:MGI Symbol;Acc:MGI:3802174]
64. Irx6 ENSMUSG00000031738 33 0.712 - - 0.712 - - - Iroquois homeobox 6 [Source:MGI Symbol;Acc:MGI:1927642]
65. Irx2 ENSMUSG00000001504 819 0.711 - - - - 0.711 - Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
66. Ctnna2 ENSMUSG00000063063 310 0.711 - - 0.711 - - - catenin (cadherin associated protein), alpha 2 [Source:MGI Symbol;Acc:MGI:88275]
67. Aspg ENSMUSG00000037686 103 0.711 - - 0.711 - - - asparaginase [Source:MGI Symbol;Acc:MGI:2144822]
68. Ermap ENSMUSG00000028644 158 0.711 - - 0.711 - - - erythroblast membrane-associated protein [Source:MGI Symbol;Acc:MGI:1349816]
69. A730056A06Rik ENSMUSG00000097756 30 0.711 - - 0.711 - - - RIKEN cDNA A730056A06 gene [Source:MGI Symbol;Acc:MGI:2442718]
70. Gm22620 ENSMUSG00000064634 44 0.71 - - 0.710 - - - predicted gene, 22620 [Source:MGI Symbol;Acc:MGI:5452397]
71. Abca9 ENSMUSG00000041797 80 0.71 - - 0.710 - - - ATP-binding cassette, sub-family A (ABC1), member 9 [Source:MGI Symbol;Acc:MGI:2386796]
72. Snora20 ENSMUSG00000064637 25 0.709 - - 0.709 - - - small nucleolar RNA, H/ACA box 20 [Source:MGI Symbol;Acc:MGI:3819492]
73. Gm26805 ENSMUSG00000097268 14 0.708 - - 0.708 - - - predicted gene, 26805 [Source:MGI Symbol;Acc:MGI:5477299]
74. Srxn1 ENSMUSG00000032802 244 0.707 - - 0.707 - - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
75. Smoc1 ENSMUSG00000021136 421 0.707 - - 0.707 - - - SPARC related modular calcium binding 1 [Source:MGI Symbol;Acc:MGI:1929878]
76. 4732456N10Rik 4732456N10Rik 44 0.706 - - 0.706 - - -
77. 4632411P08Rik ENSMUSG00000097561 13 0.706 - - 0.706 - - - RIKEN cDNA 4632411P08 gene [Source:MGI Symbol;Acc:MGI:1925513]
78. Mfsd3 ENSMUSG00000019080 198 0.706 - - 0.706 - - - major facilitator superfamily domain containing 3 [Source:MGI Symbol;Acc:MGI:1916822]
79. Coil ENSMUSG00000033983 461 0.706 - - 0.706 - - - coilin [Source:MGI Symbol;Acc:MGI:104842]
80. 2610204G22Rik 2610204G22Rik 78 0.706 - - 0.706 - - -
81. Camk2a ENSMUSG00000024617 134 0.705 - - 0.705 - - - calcium/calmodulin-dependent protein kinase II alpha [Source:MGI Symbol;Acc:MGI:88256]
82. E130317F20Rik ENSMUSG00000091994 253 0.704 - - 0.704 - - - RIKEN cDNA E130317F20 gene [Source:MGI Symbol;Acc:MGI:3041202]
83. Gm15174 Gm15174 18 0.704 - - 0.704 - - -
84. Sp8 ENSMUSG00000048562 219 0.704 - - 0.704 - - - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
85. Gm16163 ENSMUSG00000090118 11 0.704 - - 0.704 - - - predicted gene 16163 [Source:MGI Symbol;Acc:MGI:3833836]
86. Shisa7 ENSMUSG00000053550 53 0.703 - - 0.703 - - - shisa family member 7 [Source:MGI Symbol;Acc:MGI:3605641]
87. Gm11989 ENSMUSG00000083553 73 0.703 - - 0.703 - - - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
88. Pdhb ENSMUSG00000021748 7514 0.702 - - 0.702 - - - pyruvate dehydrogenase (lipoamide) beta [Source:MGI Symbol;Acc:MGI:1915513]
89. Ssna1 ENSMUSG00000026966 1568 0.701 - - 0.701 - - - SS nuclear autoantigen 1 [Source:MGI Symbol;Acc:MGI:1915725]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA