Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Irf3

Gene Name Gene ID Reads Annotation
Irf3 ENSMUSG00000003184 617 interferon regulatory factor 3 [Source:MGI Symbol;Acc:MGI:1859179]







Genes with expression patterns similar to Irf3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Irf3 ENSMUSG00000003184 617 6 1.000 1.000 1.000 1.000 1.000 1.000 interferon regulatory factor 3 [Source:MGI Symbol;Acc:MGI:1859179]
2. Osbpl3 ENSMUSG00000029822 569 0.847 - - 0.847 - - - oxysterol binding protein-like 3 [Source:MGI Symbol;Acc:MGI:1918970]
3. Sgms2 ENSMUSG00000050931, ENSMUSG00000116143 74 0.844 - - 0.844 - - - sphingomyelin synthase 2 [Source:MGI Symbol;Acc:MGI:1921692]
4. Disc1 ENSMUSG00000043051 168 0.844 - - - - - 0.844 disrupted in schizophrenia 1 [Source:MGI Symbol;Acc:MGI:2447658]
5. Gm3636 ENSMUSG00000091754 235 0.841 - - 0.841 - - - predicted gene 3636 [Source:MGI Symbol;Acc:MGI:3781812]
6. Gm16183 ENSMUSG00000086067 61 0.838 - - - - - 0.838 predicted gene 16183 [Source:MGI Symbol;Acc:MGI:3802174]
7. C920006O11Rik ENSMUSG00000097574 120 0.833 - - 0.833 - - - RIKEN cDNA C920006O11 gene [Source:MGI Symbol;Acc:MGI:2443759]
8. Gm18294 ENSMUSG00000093416 29 0.83 - - 0.830 - - - predicted gene, 18294 [Source:MGI Symbol;Acc:MGI:5010479]
9. Ago4 ENSMUSG00000042500 110 0.827 - - 0.827 - - - argonaute RISC catalytic subunit 4 [Source:MGI Symbol;Acc:MGI:1924100]
10. Kbtbd13 ENSMUSG00000054978 79 0.826 - - 0.826 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:MGI Symbol;Acc:MGI:1921742]
11. Ccdc39 ENSMUSG00000027676 104 0.825 - - 0.825 - - - coiled-coil domain containing 39 [Source:MGI Symbol;Acc:MGI:1289263]
12. Colec11 ENSMUSG00000036655 47 0.821 - - 0.821 - - - collectin sub-family member 11 [Source:MGI Symbol;Acc:MGI:1918943]
13. Cldn3 ENSMUSG00000070473 65 0.82 - - 0.820 - - - claudin 3 [Source:MGI Symbol;Acc:MGI:1329044]
14. Adam9 ENSMUSG00000031555 184 0.819 - - 0.819 - - - a disintegrin and metallopeptidase domain 9 (meltrin gamma) [Source:MGI Symbol;Acc:MGI:105376]
15. Aldh3b2 ENSMUSG00000075296 33 0.818 - - 0.818 - - - aldehyde dehydrogenase 3 family, member B2 [Source:MGI Symbol;Acc:MGI:2147613]
16. Fam83e ENSMUSG00000054161 107 0.818 - - 0.818 - - - family with sequence similarity 83, member E [Source:MGI Symbol;Acc:MGI:1921063]
17. AU015836 ENSMUSG00000081044 36 0.818 - - 0.818 - - - expressed sequence AU015836 [Source:MGI Symbol;Acc:MGI:2147954]
18. Kif20a ENSMUSG00000003779 48 0.817 - - 0.817 - - - kinesin family member 20A [Source:MGI Symbol;Acc:MGI:1201682]
19. Tnni2 ENSMUSG00000031097 62 0.817 - - 0.817 - - - troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070]
20. Bhlhe40 ENSMUSG00000030103 67 0.817 - - 0.817 - - - basic helix-loop-helix family, member e40 [Source:MGI Symbol;Acc:MGI:1097714]
21. Kremen1 ENSMUSG00000020393 424 0.817 - - 0.817 - - - kringle containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1933988]
22. Nbeal2 ENSMUSG00000056724 47 0.816 - - 0.816 - - - neurobeachin-like 2 [Source:MGI Symbol;Acc:MGI:2448554]
23. 4933430I17Rik ENSMUSG00000058046 29 0.816 - - 0.816 - - - RIKEN cDNA 4933430I17 gene [Source:MGI Symbol;Acc:MGI:3045314]
24. Apbb3 1262 0.815 - - 0.815 - - - amyloid beta (A4) precursor protein-binding, family B, member 3, transcript variant X1
25. Grhl3 ENSMUSG00000037188 211 0.815 - - 0.815 - - - grainyhead like transcription factor 3 [Source:MGI Symbol;Acc:MGI:2655333]
26. Cdc42bpg ENSMUSG00000024769, ENSMUSG00000107268 97 0.815 - - 0.815 - - - CDC42 binding protein kinase gamma (DMPK-like) [Source:MGI Symbol;Acc:MGI:2652845]
27. Gm16070 ENSMUSG00000085125 40 0.815 - - 0.815 - - - predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
28. Phex ENSMUSG00000057457 65 0.814 - - 0.814 - - - phosphate regulating endopeptidase homolog, X-linked [Source:MGI Symbol;Acc:MGI:107489]
29. A930001C03Rik ENSMUSG00000087132 15 0.813 - - 0.813 - - - RIKEN cDNA A930001C03 gene [Source:MGI Symbol;Acc:MGI:2441838]
30. Zpbp ENSMUSG00000020193 26 0.813 - - 0.813 - - - zona pellucida binding protein [Source:MGI Symbol;Acc:MGI:1855701]
31. Oxsm ENSMUSG00000021786 115 0.812 - - 0.812 - - - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
32. Tstd2 ENSMUSG00000035495 62 0.812 - - 0.812 - - - thiosulfate sulfurtransferase (rhodanese)-like domain containing 2 [Source:MGI Symbol;Acc:MGI:3039624]
33. Zfp879 ENSMUSG00000044296 77 0.811 - - 0.811 - - - zinc finger protein 879 [Source:MGI Symbol;Acc:MGI:3053099]
34. Glb1l ENSMUSG00000026200 115 0.811 - - 0.811 - - - galactosidase, beta 1-like [Source:MGI Symbol;Acc:MGI:1921827]
35. Gabbr2 ENSMUSG00000039809 53 0.81 - - 0.810 - - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:MGI Symbol;Acc:MGI:2386030]
36. Acsm3 ENSMUSG00000030935 8 0.81 - - 0.810 - - - acyl-CoA synthetase medium-chain family member 3 [Source:MGI Symbol;Acc:MGI:99538]
37. Gm22897 ENSMUSG00000105400, ENSMUSG00000106272 7 0.81 - - 0.810 - - - predicted gene, 22897 [Source:MGI Symbol;Acc:MGI:5452674]
38. Mb ENSMUSG00000018893 25 0.81 - - 0.810 - - - myoglobin [Source:MGI Symbol;Acc:MGI:96922]
39. Gm21098 Gm21098 9 0.81 - - 0.810 - - -
40. Fam46b 25 0.809 - - 0.809 - - - family with sequence similarity 46, member B
41. Gm12459 ENSMUSG00000083153 32 0.809 - - 0.809 - - - predicted gene 12459 [Source:MGI Symbol;Acc:MGI:3651071]
42. Zbtb24 ENSMUSG00000019826 192 0.809 - - 0.809 - - - zinc finger and BTB domain containing 24 [Source:MGI Symbol;Acc:MGI:3039618]
43. Gm9888 ENSMUSG00000052724 44 0.809 - - 0.809 - - - predicted gene 9888 [Source:MGI Symbol;Acc:MGI:3642202]
44. Gm11483 ENSMUSG00000083943 8 0.809 - - 0.809 - - - predicted gene 11483 [Source:MGI Symbol;Acc:MGI:3652237]
45. Mov10l1 ENSMUSG00000015365 22 0.808 - - 0.808 - - - Moloney leukemia virus 10-like 1 [Source:MGI Symbol;Acc:MGI:1891384]
46. Fbxo4 ENSMUSG00000022184 84 0.807 - - 0.807 - - - F-box protein 4 [Source:MGI Symbol;Acc:MGI:2146220]
47. 4933408B17Rik ENSMUSG00000049357 33 0.806 - - 0.806 - - - RIKEN cDNA 4933408B17 gene [Source:MGI Symbol;Acc:MGI:3045347]
48. Slx4 ENSMUSG00000039738 279 0.805 - - 0.805 - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:106299]
49. Kcnip3 ENSMUSG00000079056 249 0.804 - - 0.804 - - - Kv channel interacting protein 3, calsenilin [Source:MGI Symbol;Acc:MGI:1929258]
50. Gng7 ENSMUSG00000048240 207 0.803 - - 0.803 - - - guanine nucleotide binding protein (G protein), gamma 7 [Source:MGI Symbol;Acc:MGI:95787]
51. Cdhr4 ENSMUSG00000032595 124 0.803 - - 0.803 - - - cadherin-related family member 4 [Source:MGI Symbol;Acc:MGI:1916648]
52. Ptpn3 ENSMUSG00000038764 94 0.8 - - 0.800 - - - protein tyrosine phosphatase, non-receptor type 3 [Source:MGI Symbol;Acc:MGI:105307]
53. Wdr59 ENSMUSG00000031959 222 0.799 - - 0.799 - - - WD repeat domain 59 [Source:MGI Symbol;Acc:MGI:2442115]
54. BC042782 BC042782 63 0.798 - - 0.798 - - -
55. Prrt4 ENSMUSG00000079654 149 0.798 - - 0.798 - - - proline-rich transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:2141677]
56. Nptx1 ENSMUSG00000025582 75 0.798 - - 0.798 - - - neuronal pentraxin 1 [Source:MGI Symbol;Acc:MGI:107811]
57. Nmb ENSMUSG00000025723 235 0.797 - - 0.797 - - - neuromedin B [Source:MGI Symbol;Acc:MGI:1915289]
58. Zfpm2 ENSMUSG00000022306 343 0.797 - - 0.797 - - - zinc finger protein, multitype 2 [Source:MGI Symbol;Acc:MGI:1334444]
59. Lrfn4 ENSMUSG00000045045 927 0.796 - - 0.796 - - - leucine rich repeat and fibronectin type III domain containing 4 [Source:MGI Symbol;Acc:MGI:2385612]
60. Gm13328 ENSMUSG00000081128 29 0.796 - - 0.796 - - - predicted gene 13328 [Source:MGI Symbol;Acc:MGI:3651185]
61. P2rx7 ENSMUSG00000029468 35 0.795 - - 0.795 - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:MGI Symbol;Acc:MGI:1339957]
62. Rab3d ENSMUSG00000019066 139 0.795 - - 0.795 - - - RAB3D, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:97844]
63. Gpr126 Gpr126 318 0.795 - - 0.795 - - -
64. Ears2 ENSMUSG00000030871 238 0.794 - - 0.794 - - - glutamyl-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1914667]
65. 6430548M08Rik ENSMUSG00000031824 316 0.793 - - 0.793 - - - RIKEN cDNA 6430548M08 gene [Source:MGI Symbol;Acc:MGI:2443793]
66. Il3ra ENSMUSG00000068758 25 0.792 - - 0.792 - - - interleukin 3 receptor, alpha chain [Source:MGI Symbol;Acc:MGI:96553]
67. Gm5428 Gm5428 87 0.791 - - 0.791 - - -
68. Chst5 ENSMUSG00000031952 39 0.79 - - 0.790 - - - carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 [Source:MGI Symbol;Acc:MGI:1931825]
69. Slc8b1 ENSMUSG00000032754 147 0.786 - - 0.786 - - - solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 [Source:MGI Symbol;Acc:MGI:2180781]
70. Pitpnc1 ENSMUSG00000040430 4748 0.786 - - - - - 0.786 phosphatidylinositol transfer protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1919045]
71. Abcg5 ENSMUSG00000040505 25 0.786 - - 0.786 - - - ATP binding cassette subfamily G member 5 [Source:MGI Symbol;Acc:MGI:1351659]
72. Cpne2 ENSMUSG00000034361 315 0.785 - - 0.785 - - - copine II [Source:MGI Symbol;Acc:MGI:2387578]
73. AI413582 ENSMUSG00000062753 316 0.785 - - 0.785 - - - expressed sequence AI413582 [Source:MGI Symbol;Acc:MGI:2146839]
74. Atp8b2 ENSMUSG00000060671 375 0.784 - - 0.784 - - - ATPase, class I, type 8B, member 2 [Source:MGI Symbol;Acc:MGI:1859660]
75. Ero1lb ENSMUSG00000057069 171 0.783 - - 0.783 - - - ERO1-like beta (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914725]
76. Gfra4 ENSMUSG00000027316 419 0.782 - - 0.782 - - - glial cell line derived neurotrophic factor family receptor alpha 4 [Source:MGI Symbol;Acc:MGI:1341873]
77. Tac2 ENSMUSG00000025400 746 0.78 - - 0.780 - - - tachykinin 2 [Source:MGI Symbol;Acc:MGI:98476]
78. Nespos Nespos 46 0.779 - - 0.779 - - -
79. Fn3krp ENSMUSG00000039253 676 0.778 - - 0.778 - - - fructosamine 3 kinase related protein [Source:MGI Symbol;Acc:MGI:2679256]
80. Gm129 Gm129 468 0.777 - - 0.777 - - -
81. Hcn4 ENSMUSG00000032338 147 0.775 - - 0.775 - - - hyperpolarization-activated, cyclic nucleotide-gated K+ 4 [Source:MGI Symbol;Acc:MGI:1298209]
82. Zfp112 ENSMUSG00000052675 56 0.775 - - 0.775 - - - zinc finger protein 112 [Source:MGI Symbol;Acc:MGI:1929115]
83. Upp2 ENSMUSG00000026839 138 0.775 - - 0.775 - - - uridine phosphorylase 2 [Source:MGI Symbol;Acc:MGI:1923904]
84. Snx33 ENSMUSG00000032733 589 0.774 - - - - - 0.774 sorting nexin 33 [Source:MGI Symbol;Acc:MGI:2443239]
85. Dis3l ENSMUSG00000032396 662 0.774 - - 0.774 - - - DIS3 like exosome 3'-5' exoribonuclease [Source:MGI Symbol;Acc:MGI:2143272]
86. Fastkd1 ENSMUSG00000027086 217 0.773 - - 0.773 - - - FAST kinase domains 1 [Source:MGI Symbol;Acc:MGI:2444596]
87. Prkag1 ENSMUSG00000067713 1318 0.773 - - 0.773 - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:108411]
88. Gm24854 ENSMUSG00000088650 314 0.772 - - 0.772 - - - predicted gene, 24854 [Source:MGI Symbol;Acc:MGI:5454631]
89. Ddx58 ENSMUSG00000040296 396 0.772 - - 0.772 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 [Source:MGI Symbol;Acc:MGI:2442858]
90. Cpeb2 ENSMUSG00000039782 373 0.771 - - 0.771 - - - cytoplasmic polyadenylation element binding protein 2 [Source:MGI Symbol;Acc:MGI:2442640]
91. Grrp1 ENSMUSG00000050105 180 0.769 - - 0.769 - - - glycine/arginine rich protein 1 [Source:MGI Symbol;Acc:MGI:1919940]
92. Fam212b 49 0.768 - - 0.768 - - - family with sequence similarity 212, member B, transcript variant X1
93. Neat1 ENSMUSG00000092274 205 0.768 - - 0.768 - - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
94. 2310010J17Rik ENSMUSG00000097162 99 0.767 - - 0.767 - - - RIKEN cDNA 2310010J17 gene [Source:MGI Symbol;Acc:MGI:1925579]
95. 4732491K20Rik ENSMUSG00000097350 92 0.767 - - 0.767 - - - RIKEN cDNA 4732491K20 gene [Source:MGI Symbol;Acc:MGI:3026975]
96. Rtn2 ENSMUSG00000030401 395 0.766 - - 0.766 - - - reticulon 2 (Z-band associated protein) [Source:MGI Symbol;Acc:MGI:107612]
97. Bend5 ENSMUSG00000028545 765 0.764 - - 0.764 - - - BEN domain containing 5 [Source:MGI Symbol;Acc:MGI:1914871]
98. Slc2a4rg-ps ENSMUSG00000085028 218 0.763 - - 0.763 - - - Slc2a4 regulator, pseudogene [Source:MGI Symbol;Acc:MGI:3651388]
99. Zfp46 ENSMUSG00000051351 1419 0.763 - - 0.763 - - - zinc finger protein 46 [Source:MGI Symbol;Acc:MGI:99192]
100. Xkr5 ENSMUSG00000039814 339 0.762 - - 0.762 - - - X-linked Kx blood group related 5 [Source:MGI Symbol;Acc:MGI:2442327]

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA