Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Irf1

Gene Name Gene ID Reads Annotation
Irf1 ENSMUSG00000018899 239 interferon regulatory factor 1 [Source:MGI Symbol;Acc:MGI:96590]







Genes with expression patterns similar to Irf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Irf1 ENSMUSG00000018899 239 6 1.000 1.000 1.000 1.000 1.000 1.000 interferon regulatory factor 1 [Source:MGI Symbol;Acc:MGI:96590]
2. Fmod ENSMUSG00000041559 161 1.532 - 0.787 0.745 - - - fibromodulin [Source:MGI Symbol;Acc:MGI:1328364]
3. Kcnj15 ENSMUSG00000062609 31 1.445 - 0.737 0.708 - - - potassium inwardly-rectifying channel, subfamily J, member 15 [Source:MGI Symbol;Acc:MGI:1310000]
4. Gm10000 ENSMUSG00000114826 31 0.903 - 0.903 - - - - predicted gene 10000 [Source:MGI Symbol;Acc:MGI:3641968]
5. Gm13429 ENSMUSG00000085141 36 0.896 - 0.896 - - - - predicted gene 13429 [Source:MGI Symbol;Acc:MGI:3651652]
6. Pyroxd2 ENSMUSG00000060224 46 0.893 - 0.893 - - - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:MGI Symbol;Acc:MGI:1921830]
7. Mamdc4 ENSMUSG00000026941 192 0.893 - - 0.893 - - - MAM domain containing 4 [Source:MGI Symbol;Acc:MGI:2685841]
8. Gm16365 ENSMUSG00000086915 59 0.887 - 0.887 - - - - predicted gene 16365 [Source:MGI Symbol;Acc:MGI:3840143]
9. Gm10557 ENSMUSG00000073647 15 0.883 - 0.883 - - - - predicted gene 10557 [Source:MGI Symbol;Acc:MGI:3708638]
10. Dnase1l3 ENSMUSG00000025279 16 0.883 - 0.883 - - - - deoxyribonuclease 1-like 3 [Source:MGI Symbol;Acc:MGI:1314633]
11. Gm13151 Gm13151 9 0.883 - 0.883 - - - -
12. Adamtsl5 ENSMUSG00000043822 31 0.883 - 0.883 - - - - ADAMTS-like 5 [Source:MGI Symbol;Acc:MGI:1913798]
13. Gm14261 ENSMUSG00000085322 26 0.883 - 0.883 - - - - predicted gene 14261 [Source:MGI Symbol;Acc:MGI:3649583]
14. 6330408A02Rik 210 0.882 - 0.882 - - - - RIKEN cDNA 6330408A02 gene
15. 1600029O15Rik ENSMUSG00000057818 30 0.88 - 0.880 - - - - RIKEN cDNA 1600029O15 gene [Source:MGI Symbol;Acc:MGI:3045362]
16. Myh14 ENSMUSG00000030739 30 0.876 - 0.876 - - - - myosin, heavy polypeptide 14 [Source:MGI Symbol;Acc:MGI:1919210]
17. Rbl2 ENSMUSG00000031666 25 0.873 - 0.873 - - - - RB transcriptional corepressor like 2 [Source:MGI Symbol;Acc:MGI:105085]
18. Bspry ENSMUSG00000028392 37 0.873 - 0.873 - - - - B-box and SPRY domain containing [Source:MGI Symbol;Acc:MGI:2177191]
19. Tulp1 ENSMUSG00000037446 33 0.87 - 0.870 - - - - tubby like protein 1 [Source:MGI Symbol;Acc:MGI:109571]
20. Steap3 ENSMUSG00000026389 20 0.868 - 0.868 - - - - STEAP family member 3 [Source:MGI Symbol;Acc:MGI:1915678]
21. M5C1000I18Rik ENSMUSG00000055125 33 0.867 - 0.867 - - - - RIKEN cDNA M5C1000I18 gene [Source:MGI Symbol;Acc:MGI:3642038]
22. Gm22613 ENSMUSG00000084628 31 0.864 - 0.864 - - - - predicted gene, 22613 [Source:MGI Symbol;Acc:MGI:5452390]
23. Tbx4 ENSMUSG00000000094 350 0.863 - 0.863 - - - - T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
24. Micall2 ENSMUSG00000036718 130 0.863 - 0.863 - - - - MICAL-like 2 [Source:MGI Symbol;Acc:MGI:2444818]
25. Pkn1 ENSMUSG00000057672 59 0.862 - 0.862 - - - - protein kinase N1 [Source:MGI Symbol;Acc:MGI:108022]
26. Syt9 ENSMUSG00000062542 127 0.861 - 0.861 - - - - synaptotagmin IX [Source:MGI Symbol;Acc:MGI:1926373]
27. Fam221a ENSMUSG00000047115 190 0.86 - 0.860 - - - - family with sequence similarity 221, member A [Source:MGI Symbol;Acc:MGI:2442161]
28. Gm26826 ENSMUSG00000097635 33 0.854 - 0.854 - - - - predicted gene, 26826 [Source:MGI Symbol;Acc:MGI:5477320]
29. Gm19357 Gm19357 51 0.853 - 0.853 - - - -
30. Vps13c ENSMUSG00000035284 230 0.852 - 0.852 - - - - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
31. n-R5s31 ENSMUSG00000077350 17 0.852 - 0.852 - - - - nuclear encoded rRNA 5S 31 [Source:MGI Symbol;Acc:MGI:4421876]
32. Ankrd55 ENSMUSG00000049985 18 0.851 - 0.851 - - - - ankyrin repeat domain 55 [Source:MGI Symbol;Acc:MGI:1924568]
33. Alpk3 ENSMUSG00000038763 71 0.851 - 0.851 - - - - alpha-kinase 3 [Source:MGI Symbol;Acc:MGI:2151224]
34. Gpr156 ENSMUSG00000046961 57 0.845 - 0.845 - - - - G protein-coupled receptor 156 [Source:MGI Symbol;Acc:MGI:2653880]
35. Lnpep ENSMUSG00000023845 48 0.843 - 0.843 - - - - leucyl/cystinyl aminopeptidase [Source:MGI Symbol;Acc:MGI:2387123]
36. Kif13b ENSMUSG00000060012 56 0.843 - 0.843 - - - - kinesin family member 13B [Source:MGI Symbol;Acc:MGI:1098265]
37. Ppl ENSMUSG00000039457 107 0.841 - 0.841 - - - - periplakin [Source:MGI Symbol;Acc:MGI:1194898]
38. Abcg1 ENSMUSG00000024030 101 0.84 - 0.840 - - - - ATP binding cassette subfamily G member 1 [Source:MGI Symbol;Acc:MGI:107704]
39. Tmc6 ENSMUSG00000025572 215 0.837 - 0.837 - - - - transmembrane channel-like gene family 6 [Source:MGI Symbol;Acc:MGI:1098686]
40. Ankrd13d ENSMUSG00000005986 96 0.836 - 0.836 - - - - ankyrin repeat domain 13 family, member D [Source:MGI Symbol;Acc:MGI:1915673]
41. 4930563E22Rik ENSMUSG00000053574 111 0.835 - 0.835 - - - - RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
42. Slc35e1 ENSMUSG00000019731 1126 0.832 - 0.832 - - - - solute carrier family 35, member E1 [Source:MGI Symbol;Acc:MGI:2142403]
43. Zfp84 ENSMUSG00000046185 136 0.832 - 0.832 - - - - zinc finger protein 84 [Source:MGI Symbol;Acc:MGI:107780]
44. Gm9776 ENSMUSG00000042857 174 0.824 - 0.824 - - - - predicted gene 9776 [Source:MGI Symbol;Acc:MGI:3641792]
45. Grm4 ENSMUSG00000063239 430 0.824 - 0.824 - - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
46. B3gnt3 ENSMUSG00000031803 47 0.82 - 0.820 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:MGI Symbol;Acc:MGI:2152535]
47. Gm4425 ENSMUSG00000093846 106 0.818 - 0.818 - - - - predicted gene 4425 [Source:MGI Symbol;Acc:MGI:3809660]
48. Rassf10 ENSMUSG00000098132 107 0.815 - 0.815 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 [Source:MGI Symbol;Acc:MGI:1925998]
49. Cpne7 ENSMUSG00000034796 49 0.815 - 0.815 - - - - copine VII [Source:MGI Symbol;Acc:MGI:2142747]
50. Cntln ENSMUSG00000038070 976 0.813 - 0.813 - - - - centlein, centrosomal protein [Source:MGI Symbol;Acc:MGI:2443104]
51. Trdn ENSMUSG00000019787 30 0.812 - 0.812 - - - - triadin [Source:MGI Symbol;Acc:MGI:1924007]
52. Selm 538 0.811 - 0.811 - - - - selenoprotein M
53. A730017L22Rik ENSMUSG00000085566 146 0.81 - 0.810 - - - - RIKEN cDNA A730017L22 gene [Source:MGI Symbol;Acc:MGI:3584452]
54. Fam129a ENSMUSG00000026483 115 0.808 - 0.808 - - - - family with sequence similarity 129, member A [Source:MGI Symbol;Acc:MGI:2137237]
55. Xlr4c ENSMUSG00000031362 30 0.808 - 0.808 - - - - X-linked lymphocyte-regulated 4C [Source:MGI Symbol;Acc:MGI:3574099]
56. Pth1r ENSMUSG00000032492 1129 0.808 - 0.808 - - - - parathyroid hormone 1 receptor [Source:MGI Symbol;Acc:MGI:97801]
57. Tmem104 ENSMUSG00000045980 190 0.807 - 0.807 - - - - transmembrane protein 104 [Source:MGI Symbol;Acc:MGI:2444222]
58. Gm13077 ENSMUSG00000081544 45 0.804 - 0.804 - - - - predicted gene 13077 [Source:MGI Symbol;Acc:MGI:3649703]
59. Erap1 ENSMUSG00000021583 70 0.803 - - 0.803 - - - endoplasmic reticulum aminopeptidase 1 [Source:MGI Symbol;Acc:MGI:1933403]
60. Caps2 ENSMUSG00000035694 1063 0.803 - 0.803 - - - - calcyphosphine 2 [Source:MGI Symbol;Acc:MGI:2441980]
61. Fbxl4 ENSMUSG00000040410 157 0.802 - 0.802 - - - - F-box and leucine-rich repeat protein 4 [Source:MGI Symbol;Acc:MGI:2140367]
62. Dusp11 ENSMUSG00000030002 1522 0.802 - - 0.802 - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:MGI Symbol;Acc:MGI:1919352]
63. Phlda3 ENSMUSG00000041801 173 0.799 - 0.799 - - - - pleckstrin homology like domain, family A, member 3 [Source:MGI Symbol;Acc:MGI:1351485]
64. Lcp2 ENSMUSG00000002699 285 0.798 - 0.798 - - - - lymphocyte cytosolic protein 2 [Source:MGI Symbol;Acc:MGI:1321402]
65. Gm6055 ENSMUSG00000062081 62 0.797 - 0.797 - - - - predicted gene 6055 [Source:MGI Symbol;Acc:MGI:3648620]
66. Snx21 ENSMUSG00000050373 473 0.796 - - 0.796 - - - sorting nexin family member 21 [Source:MGI Symbol;Acc:MGI:1917729]
67. Txlnb ENSMUSG00000039891 77 0.794 - 0.794 - - - - taxilin beta [Source:MGI Symbol;Acc:MGI:2671945]
68. Gm2a ENSMUSG00000000594 385 0.792 - 0.792 - - - - GM2 ganglioside activator protein [Source:MGI Symbol;Acc:MGI:95762]
69. Anpep ENSMUSG00000039062 113 0.791 - 0.791 - - - - alanyl (membrane) aminopeptidase [Source:MGI Symbol;Acc:MGI:5000466]
70. Slc35f6 ENSMUSG00000029175 362 0.79 - - 0.790 - - - solute carrier family 35, member F6 [Source:MGI Symbol;Acc:MGI:1922169]
71. Heatr6 ENSMUSG00000000976 1640 0.788 - - 0.788 - - - HEAT repeat containing 6 [Source:MGI Symbol;Acc:MGI:1919790]
72. 9430037G07Rik ENSMUSG00000097073 107 0.787 - 0.787 - - - - RIKEN cDNA 9430037G07 gene [Source:MGI Symbol;Acc:MGI:2444544]
73. Mettl25 ENSMUSG00000036009 217 0.787 - 0.787 - - - - methyltransferase like 25 [Source:MGI Symbol;Acc:MGI:3041259]
74. Fam19a1 ENSMUSG00000059187 41 0.787 - 0.787 - - - - family with sequence similarity 19, member A1 [Source:MGI Symbol;Acc:MGI:2443695]
75. Csf3r ENSMUSG00000028859 278 0.787 - 0.787 - - - - colony stimulating factor 3 receptor (granulocyte) [Source:MGI Symbol;Acc:MGI:1339755]
76. Ptchd1 ENSMUSG00000041552 91 0.785 - - 0.785 - - - patched domain containing 1 [Source:MGI Symbol;Acc:MGI:2685233]
77. Slc2a10 ENSMUSG00000027661 105 0.782 - 0.782 - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:MGI Symbol;Acc:MGI:2156687]
78. Myo1c ENSMUSG00000017774 979 0.781 - 0.781 - - - - myosin IC [Source:MGI Symbol;Acc:MGI:106612]
79. Cyb5d2 ENSMUSG00000057778 119 0.779 - 0.779 - - - - cytochrome b5 domain containing 2 [Source:MGI Symbol;Acc:MGI:2684848]
80. Tmprss2 ENSMUSG00000000385 70 0.777 - 0.777 - - - - transmembrane protease, serine 2 [Source:MGI Symbol;Acc:MGI:1354381]
81. Fahd2a ENSMUSG00000027371 222 0.774 - 0.774 - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
82. Trim21 ENSMUSG00000030966 294 0.772 - 0.772 - - - - tripartite motif-containing 21 [Source:MGI Symbol;Acc:MGI:106657]
83. Snord92 ENSMUSG00000093289 108 0.767 - 0.767 - - - - small nucleolar RNA, C/D box 92 [Source:MGI Symbol;Acc:MGI:3819565]
84. Spint2 ENSMUSG00000074227 613 0.766 - 0.766 - - - - serine protease inhibitor, Kunitz type 2 [Source:MGI Symbol;Acc:MGI:1338031]
85. Prkag2 ENSMUSG00000028944 521 0.765 - - 0.765 - - - protein kinase, AMP-activated, gamma 2 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:1336153]
86. Mb21d1 ENSMUSG00000032344 125 0.765 - 0.765 - - - - Mab-21 domain containing 1 [Source:MGI Symbol;Acc:MGI:2442261]
87. Ppp1r16b ENSMUSG00000037754 221 0.764 - 0.764 - - - - protein phosphatase 1, regulatory subunit 16B [Source:MGI Symbol;Acc:MGI:2151841]
88. Gm26624 ENSMUSG00000097122 753 0.763 - - 0.763 - - - predicted gene, 26624 [Source:MGI Symbol;Acc:MGI:5477118]
89. Rps6 ENSMUSG00000028495 132 0.761 - 0.761 - - - - ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:98159]
90. Arhgap6 ENSMUSG00000031355 260 0.761 - 0.761 - - - - Rho GTPase activating protein 6 [Source:MGI Symbol;Acc:MGI:1196332]
91. Dhdds ENSMUSG00000012117 1081 0.758 - 0.758 - - - - dehydrodolichyl diphosphate synthase [Source:MGI Symbol;Acc:MGI:1914672]
92. Ska3 ENSMUSG00000021965 1467 0.756 - - 0.756 - - - spindle and kinetochore associated complex subunit 3 [Source:MGI Symbol;Acc:MGI:3041235]
93. Gm24056 ENSMUSG00000089242 346 0.756 - - 0.756 - - - predicted gene, 24056 [Source:MGI Symbol;Acc:MGI:5453833]
94. Ppm1h ENSMUSG00000034613 200 0.753 - 0.753 - - - - protein phosphatase 1H (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2442087]
95. Rnf130 ENSMUSG00000020376 530 0.752 - 0.752 - - - - ring finger protein 130 [Source:MGI Symbol;Acc:MGI:1891717]
96. Egfl6 ENSMUSG00000000402 137 0.752 - - 0.752 - - - EGF-like-domain, multiple 6 [Source:MGI Symbol;Acc:MGI:1858599]
97. Nabp1 ENSMUSG00000026107 279 0.751 - 0.751 - - - - nucleic acid binding protein 1 [Source:MGI Symbol;Acc:MGI:1923258]
98. Rgs17 ENSMUSG00000019775 109 0.751 - 0.751 - - - - regulator of G-protein signaling 17 [Source:MGI Symbol;Acc:MGI:1927469]
99. Chchd7 ENSMUSG00000042198 497 0.75 - - 0.750 - - - coiled-coil-helix-coiled-coil-helix domain containing 7 [Source:MGI Symbol;Acc:MGI:1913683]
100. Gm22 71 0.749 - - 0.749 - - - predicted gene 22, transcript variant X1

There are 79 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA