Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IVD

Gene Name Gene ID Reads Annotation
IVD ENSGALG00000040267 5820 isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]











Genes with expression patterns similar to IVD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IVD ENSGALG00000040267 5820 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
2. TMEM200C ENSGALG00000030210 1434 1.822 - - 0.840 - - - - 0.982 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
3. CDKAL1 ENSGALG00000012677 4733 1.717 - - - - - - 0.734 0.983 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
4. KLHL18 ENSGALG00000005582 3053 1.673 - - - - - - 0.735 0.938 - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
5. AP5Z1 ENSGALG00000040528 4302 1.664 - - - - - - 0.715 0.949 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
6. PSMC5 ENSGALG00000000349 21346 1.662 - - 0.823 - - - - 0.839 - - proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:428274]
7. ZOV3 ZOV3 3267 1.645 - - 0.894 - - - - - 0.751 -
8. TMEM104 ENSGALG00000007747 2390 1.631 - - 0.869 - - - 0.762 - - - transmembrane protein 104 [Source:NCBI gene;Acc:422110]
9. RSL1D1 ENSGALG00000033690 13638 1.599 - - 0.826 - - - 0.773 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
10. TMEM167A ENSGALG00000027332 13862 1.593 - - - - - - 0.781 0.812 - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
11. CDK9 ENSGALG00000035576 3659 1.591 - - 0.752 - - - - 0.839 - - cyclin dependent kinase 9 [Source:NCBI gene;Acc:417226]
12. RNF220 ENSGALG00000010109 3114 1.585 - - 0.741 - - - - 0.844 - - ring finger protein 220 [Source:NCBI gene;Acc:424580]
13. TLK2 ENSGALG00000000410 4690 1.582 - - 0.819 - - - 0.763 - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
14. SECISBP2 ENSGALG00000010694 6990 1.547 - - 0.781 - - - 0.766 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
15. C1D ENSGALG00000008765 14779 1.544 - - 0.721 - - - - 0.823 - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
16. GPR107 ENSGALG00000004052 3392 1.531 - - 0.811 - - - 0.720 - - - G protein-coupled receptor 107 [Source:NCBI gene;Acc:417186]
17. gga-mir-6599 ENSGALG00000028121 4746 1.531 - - 0.810 - - - 0.721 - - - gga-mir-6599 [Source:miRBase;Acc:MI0022544]
18. GPBP1L1 ENSGALG00000010276 10253 1.53 - - 0.782 - - - - - 0.748 - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
19. LATS1 ENSGALG00000012386 3455 1.493 - - 0.774 - - - 0.719 - - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
20. AGRN ENSGALG00000039193 8135 1.487 - - 0.709 - - - 0.778 - - - agrin [Source:NCBI gene;Acc:396538]
21. SRSF4 1200 1.487 - - 0.742 - - - - - 0.745 - serine and arginine rich splicing factor 4, transcript variant X2
22. GUK1 ENSGALG00000005336 5134 1.46 - - 0.757 - - - 0.703 - - - guanylate kinase 1 [Source:HGNC Symbol;Acc:HGNC:4693]
23. CLN8 ENSGALG00000039606 4209 1.454 - - 0.736 - - - 0.718 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
24. SETD3 ENSGALG00000034802 4125 1.426 - - 0.720 - - - 0.706 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
25. HOXA5 ENSGALG00000025929 6231 1.405 - - - - - - 0.700 - 0.705 - homeobox A5 [Source:NCBI gene;Acc:100858404]
26. FSBP 3152 0.988 - - - - - - - 0.988 - - fibrinogen silencer binding protein
27. RAD52 ENSGALG00000039171 6989 0.986 - - - - - - - 0.986 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
28. NEO1 ENSGALG00000001774 10165 0.986 - - - - - - - 0.986 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
29. PIGB ENSGALG00000037734 2193 0.986 - - - - - - - 0.986 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
30. ZCCHC10 ENSGALG00000036666 5148 0.986 - - - - - - - 0.986 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
31. MIEN1 ENSGALG00000026328 3396 0.985 - - - - - - - 0.985 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
32. MTFR2 ENSGALG00000019967 4436 0.985 - - - - - - - 0.985 - - mitochondrial fission regulator 2, transcript variant X1
33. ENSGALG00000002852 ENSGALG00000002852 2687 0.985 - - - - - - - 0.985 - -
34. DIMT1 ENSGALG00000020569 5150 0.984 - - - - - - - 0.984 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
35. DEPDC1B ENSGALG00000014729 5334 0.984 - - - - - - - 0.984 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
36. ATP11B ENSGALG00000008839 3455 0.984 - - - - - - - 0.984 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
37. RAB20 ENSGALG00000016844 3250 0.983 - - - - - - - 0.983 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
38. CCDC15 1759 0.983 - - - - - - - 0.983 - - coiled-coil domain containing 15
39. RAC2 ENSGALG00000012456 987 0.983 - - - - - - - 0.983 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
40. ADAMTS6 ENSGALG00000014751 1293 0.983 - - - - - - - 0.983 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
41. KIF1A ENSGALG00000006221 1989 0.983 - - - - - - - 0.983 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
42. TNNI1 ENSGALG00000000313 4069 0.983 - - - - - - - 0.983 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
43. SFXN1 ENSGALG00000033956 2713 0.982 - - - - - - - 0.982 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
44. NKIRAS2 ENSGALG00000028971 3414 0.982 - - - - - - - 0.982 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
45. TMEM60 ENSGALG00000008330 6303 0.982 - - - - - - - 0.982 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
46. EFR3B ENSGALG00000016605 234 0.982 - - - - - - - 0.982 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
47. SIRT6 ENSGALG00000001245 3716 0.982 - - - - - - - 0.982 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
48. KCNK2 ENSGALG00000009687 1552 0.981 - - - - - - - 0.981 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
49. ARHGEF18 ENSGALG00000003572 224 0.981 - - - - - - - 0.981 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
50. SYNM ENSGALG00000007048 705 0.981 - - - - - - - 0.981 - - synemin [Source:NCBI gene;Acc:395599]
51. FAXDC2 ENSGALG00000003972 172 0.981 - - - - - - - 0.981 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
52. ENSGALG00000006278 ENSGALG00000006278 202 0.981 - - - - - - - 0.981 - -
53. TEX10 ENSGALG00000013438 3121 0.98 - - - - - - - 0.980 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
54. TMEM26 ENSGALG00000025862 2222 0.98 - - - - - - - 0.980 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
55. DAB2 ENSGALG00000003803 6143 0.98 - - - - - - - 0.980 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
56. CNPY3 ENSGALG00000028471 1413 0.979 - - - - - - - 0.979 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
57. PRDM6 ENSGALG00000005351 2078 0.979 - - - - - - - 0.979 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
58. HPS4 ENSGALG00000005595 2217 0.978 - - - - - - - 0.978 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
59. MRPL32 ENSGALG00000037258 6861 0.977 - - - - - - - 0.977 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
60. ACVR2B ENSGALG00000006158 8692 0.976 - - - - - - - 0.976 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
61. SULF1 ENSGALG00000039553 5115 0.975 - - - - - - - 0.975 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
62. DCK ENSGALG00000028501 8675 0.974 - - - - - - - 0.974 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
63. BLCAP ENSGALG00000027126 12200 0.973 - - - - - - - 0.973 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
64. MYO9A ENSGALG00000033618 4505 0.971 - - - - - - - 0.971 - - myosin IXA, transcript variant X10
65. COPS8 ENSGALG00000033385 10166 0.97 - - - - - - - 0.970 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
66. AVENAII AVENAII 4552 0.967 - - - - - - - 0.967 - -
67. GNL2 ENSGALG00000001973 10148 0.967 - - - - - - - 0.967 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
68. NDUFB4 ENSGALG00000027688 8951 0.966 - - - - - - - 0.966 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
69. SPR ENSGALG00000000067 3456 0.965 - - - - - - - 0.965 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
70. CCDC58 ENSGALG00000014413 9022 0.965 - - - - - - - 0.965 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
71. TTC37 ENSGALG00000014670 5715 0.963 - - - - - - - 0.963 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
72. STX2 ENSGALG00000002536 10438 0.96 - - - - - - - 0.960 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
73. GATC ENSGALG00000007195 8610 0.96 - - - - - - - 0.960 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
74. BEND5 ENSGALG00000010505 3298 0.958 - - - - - - - 0.958 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
75. CCDC104 CCDC104 6584 0.955 - - - - - - - 0.955 - -
76. YIPF1 5945 0.953 - - - - - - - 0.953 - - Yip1 domain family member 1, transcript variant 4
77. LRRC59 ENSGALG00000007673 2081 0.952 - - - - - - - 0.952 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
78. MAGT1 ENSGALG00000007861 9105 0.949 - - - - - - - 0.949 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
79. TM9SF2L ENSGALG00000006487 5566 0.949 - - - - - - - 0.949 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
80. PREP ENSGALG00000015405 17050 0.943 - - - - - - - 0.943 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
81. SNORA72 SNORA72 27695 0.935 - - - - - - - 0.935 - -
82. ENTPD5 ENSGALG00000010202 69 0.931 - - 0.931 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
83. SNRPA1 ENSGALG00000007170 17764 0.93 - - - - - - - 0.930 - - small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]
84. C19H17ORF85 C19H17ORF85 2538 0.928 - - 0.928 - - - - - - -
85. EVPL ENSGALG00000002108 591 0.927 - - - - - - - 0.927 - - envoplakin
86. TMEM38B ENSGALG00000027472 2465 0.927 - - 0.927 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
87. PDCD10 ENSGALG00000009477 7061 0.924 - - - - - - - 0.924 - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
88. C17H9ORF16 C17H9ORF16 7908 0.923 - - - - - - - 0.923 - -
89. TRIM37 ENSGALG00000005084 4036 0.919 - - 0.919 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
90. EYA3 ENSGALG00000000777 922 0.918 - - 0.918 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:NCBI gene;Acc:395717]
91. RAB11A ENSGALG00000007615 9154 0.917 - - - - - - - 0.917 - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
92. C8H1ORF52 C8H1ORF52 118 0.915 - - 0.915 - - - - - - -
93. GRPEL1 ENSGALG00000015549 11246 0.915 - - - - - - - 0.915 - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
94. INTS9 ENSGALG00000016631 742 0.912 - - 0.912 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
95. ENSGALG00000023180 ENSGALG00000023180 83 0.908 - - 0.908 - - - - - - -
96. MT1 MT1 218 0.907 - - 0.907 - - - - - - -
97. GNS ENSGALG00000009856 3045 0.907 - - 0.907 - - - - - - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
98. Sep-02 Sep-02 206 0.907 - - 0.907 - - - - - - -
99. PLEKHG5 ENSGALG00000027476 42 0.907 - - 0.907 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
100. WDR11 ENSGALG00000035013 3393 0.907 - - 0.907 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]

There are 523 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA