Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ITSN1

Gene Name Gene ID Reads Annotation
ITSN1 ENSGALG00000036677 5727 intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]











Genes with expression patterns similar to ITSN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ITSN1 ENSGALG00000036677 5727 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
2. MTDH ENSGALG00000034050 9525 1.68 0.778 - - - - - 0.902 - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
3. ENSGALG00000013233 ENSGALG00000013233 3265 1.643 0.714 - - - - - 0.929 - - -
4. RAB1A ENSGALG00000031582 6929 1.631 0.732 - - - - - 0.899 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
5. CEP290 ENSGALG00000011177 1559 1.613 0.719 - - - - - 0.894 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
6. DDX46 ENSGALG00000006404 8765 1.508 0.777 - - - - 0.731 - - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
7. HISTH1 ENSGALG00000011747 16825 1.496 0.727 - - - - - 0.769 - - - histone H1
8. NAP1L1 ENSGALG00000010238 14506 1.491 0.765 - - - - - 0.726 - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
9. KRIT1 ENSGALG00000042651 4486 1.453 0.704 - - - - - 0.749 - - - KRIT1, ankyrin repeat containing [Source:NCBI gene;Acc:420549]
10. PRPF40A ENSGALG00000012526 7724 1.452 0.714 - - - - - 0.738 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
11. SPG11 ENSGALG00000008180 1890 0.951 - - - - - - 0.951 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
12. ENSGALG00000002852 ENSGALG00000002852 2687 0.928 - - - - - - 0.928 - - -
13. GAS6 ENSGALG00000016820 481 0.926 - - - - - - 0.926 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
14. SCAF4 ENSGALG00000033965 2027 0.92 - - - - - - 0.920 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
15. UBE3B ENSGALG00000013851 1672 0.92 - - - - - - 0.920 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
16. DNAJC16 ENSGALG00000032832 750 0.92 - - - - - - 0.920 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
17. PKN3 532 0.918 - - - - - - 0.918 - - - protein kinase N3, transcript variant X2
18. MBTPS1 ENSGALG00000003293 4843 0.917 - - - - - - 0.917 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
19. PGAP2 ENSGALG00000027762 2583 0.914 - - - - - - 0.914 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
20. FTSJ2 FTSJ2 2951 0.909 - - - - - - 0.909 - - -
21. FAM183A 242 0.908 - - - - - - 0.908 - - - family with sequence similarity 183 member A, transcript variant 2
22. SDK2 ENSGALG00000031895 2682 0.908 - - - - - - 0.908 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
23. TM2D3 ENSGALG00000026271 2566 0.908 - - - - - - 0.908 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
24. MED16 ENSGALG00000001978 2387 0.906 - - - - - - 0.906 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
25. HESX1 ENSGALG00000005506 203 0.906 - - - - - - 0.906 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
26. SMOC1 ENSGALG00000009415 2403 0.905 - - - - - - 0.905 - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
27. GPC3 ENSGALG00000006087 3744 0.904 - - - - - - 0.904 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
28. ERMP1 ENSGALG00000000438 1136 0.903 - - - - - - 0.903 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
29. CCNE2 ENSGALG00000040794 1229 0.901 - - - - - - 0.901 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
30. PIK3R3 ENSGALG00000010335 374 0.901 - - - - - - 0.901 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
31. NSRP1 ENSGALG00000004186 1683 0.9 - - - - - - 0.900 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
32. NIN ENSGALG00000012361 2284 0.899 - - - - - - 0.899 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
33. MESDC1 1013 0.899 - - - - - - 0.899 - - - mesoderm development candidate 1
34. NCAPG2 ENSGALG00000006525 2319 0.899 - - - - - - 0.899 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
35. FAM193A ENSGALG00000015667 3075 0.898 - - - - - - 0.898 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
36. LFNG ENSGALG00000038515 5178 0.897 - - - - - - 0.897 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
37. FAM57A ENSGALG00000004820 1492 0.896 - - - - - - 0.896 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
38. SRP72 ENSGALG00000011403 13666 0.895 - - - - - - 0.895 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
39. NUP205 ENSGALG00000011662 4157 0.895 - - - - - - 0.895 - - - nucleoporin 205
40. PDHX ENSGALG00000033753 2799 0.894 - - - - - - 0.894 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
41. WDSUB1 ENSGALG00000012574 2038 0.893 - - - - - - 0.893 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
42. TCTE1 ENSGALG00000010165 65 0.891 - - - - - - 0.891 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
43. ENSGALG00000003619 ENSGALG00000003619 58 0.891 - - - - - - 0.891 - - -
44. WIPI1 ENSGALG00000004215 3359 0.891 - - - - - - 0.891 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
45. MBNL2 ENSGALG00000016890 3162 0.891 - - - - - - 0.891 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
46. TMEM135 2283 0.891 - - - - - - 0.891 - - - transmembrane protein 135, transcript variant X4
47. PTN ENSGALG00000040493 864 0.89 - - - - - - 0.890 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
48. SPAG9 ENSGALG00000034001 2314 0.89 - - - - - - 0.890 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
49. ENTPD8L ENSGALG00000008936 731 0.889 - - - - - - 0.889 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
50. MXRA5 ENSGALG00000016635 352 0.889 - - - - - - 0.889 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
51. USP54 ENSGALG00000005232 2749 0.889 - - - - - - 0.889 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
52. SGSM3 ENSGALG00000012033 1839 0.889 - - - - - - 0.889 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
53. ENSGALG00000016099 ENSGALG00000016099 138 0.889 - - - - - - 0.889 - - -
54. SCUBE1 ENSGALG00000014178 91 0.889 - - - - - - 0.889 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
55. CCNL1 ENSGALG00000009699 1033 0.889 - - - - - - 0.889 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
56. BMI1 ENSGALG00000041267 6618 0.889 - - - - - - 0.889 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
57. ENSGALG00000026925 ENSGALG00000026925 119 0.888 - - - - - - 0.888 - - -
58. HEMK1 ENSGALG00000002253 40 0.888 - - - - - - 0.888 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
59. RNF20 ENSGALG00000015548 7199 0.888 - - - - - - 0.888 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
60. METTL24 ENSGALG00000041120 60 0.888 - - - - - - 0.888 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
61. GRB14 ENSGALG00000020703 42 0.887 - - - - - - 0.887 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
62. ENSGALG00000028164 ENSGALG00000028164 3325 0.887 - - - - - - 0.887 - - -
63. SNORA31 SNORA31 183 0.886 - - - - - - 0.886 - - -
64. DNAJC12 ENSGALG00000002769 1418 0.886 - - - - - - 0.886 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
65. C14orf80 C14orf80 1921 0.886 - - - - - - 0.886 - - -
66. COPS8 ENSGALG00000033385 10166 0.886 - - - - - - 0.886 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
67. TPR ENSGALG00000005105 2924 0.885 - - - - - - 0.885 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
68. UPK3BL ENSGALG00000001885 1650 0.884 - - - - - - 0.884 - - - uroplakin 3B-like
69. ZFYVE19 ENSGALG00000008460 2750 0.881 - - - - - - 0.881 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
70. SUN1 ENSGALG00000003781 3442 0.881 - - - - - - 0.881 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
71. DIEXF ENSGALG00000009887 4782 0.881 - - - - - - 0.881 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
72. MGLL ENSGALG00000032736 612 0.879 - - - - - - 0.879 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
73. PLCE1 ENSGALG00000039528 151 0.879 - - - - - - 0.879 - - - phospholipase C epsilon 1
74. ASB6 ENSGALG00000004378 1080 0.878 - - - - - - 0.878 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
75. XPO7 ENSGALG00000001838 1875 0.877 - - - - - - 0.877 - - - exportin 7 [Source:NCBI gene;Acc:426925]
76. SUGP1 ENSGALG00000042132 2771 0.874 - - - - - - 0.874 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
77. MPST ENSGALG00000040840 2122 0.873 - - - - - - 0.873 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
78. MSL3 ENSGALG00000041433 2957 0.873 - - - - - - 0.873 - - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
79. TM9SF4 ENSGALG00000006568 567 0.872 - - - - - - 0.872 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
80. PARD3B ENSGALG00000042645 2893 0.872 - - - - - - 0.872 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
81. COQ7 ENSGALG00000006861 5118 0.871 - - - - - - 0.871 - - - coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
82. NEK4 ENSGALG00000041428 4473 0.871 - - - - - - 0.871 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
83. MRPL10 ENSGALG00000014387 12386 0.87 - - - - - - 0.870 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
84. PAPD7 ENSGALG00000013061 2031 0.868 - - - - - - 0.868 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
85. MCEE ENSGALG00000003913 1527 0.868 - - - - - - 0.868 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
86. KANK4 ENSGALG00000010953 726 0.867 - - - - - - 0.867 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
87. NT5C2 ENSGALG00000008179 1760 0.867 - - - - - - 0.867 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
88. ATM ENSGALG00000017159 893 0.865 - - - - - - 0.865 - - - ATM serine/threonine kinase [Source:NCBI gene;Acc:395401]
89. CDC42SE2 ENSGALG00000027258 4725 0.865 - - - - - - 0.865 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
90. NEFM ENSGALG00000000317 6992 0.865 - - - - - - 0.865 - - - neurofilament medium [Source:NCBI gene;Acc:396206]
91. CANX ENSGALG00000032148 11297 0.864 - - - - - - 0.864 - - - calnexin [Source:NCBI gene;Acc:416288]
92. MST1 ENSGALG00000002722 994 0.864 - - - - - - 0.864 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
93. B4GALT3 ENSGALG00000022891 2825 0.863 - - - - - - 0.863 - - - beta-1,4-galactosyltransferase 3
94. TOP3B ENSGALG00000030051 5953 0.861 - - - - - - 0.861 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
95. RIF1 ENSGALG00000012484 2248 0.86 - - - - - - - 0.860 - - replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
96. ALDH18A1 ENSGALG00000034655 3038 0.86 - - - - - - 0.860 - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
97. SRPK1 ENSGALG00000037546 1849 0.86 - - - - - - 0.860 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
98. GPN3 ENSGALG00000003807 6320 0.858 - - - - - - 0.858 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
99. SLC25A21 ENSGALG00000010117 536 0.857 - - - - - - 0.857 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
100. CMSS1 ENSGALG00000015267 2954 0.856 - - - - - - 0.856 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]

There are 277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA