Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ITGB2

Gene Name Gene ID Reads Annotation
ITGB2 ENSGALG00000007511 46 integrin subunit beta 2 [Source:NCBI gene;Acc:396181]











Genes with expression patterns similar to ITGB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ITGB2 ENSGALG00000007511 46 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
2. IKBIP ENSGALG00000026284 31 1.728 - - 0.917 - - 0.811 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
3. AFTPH ENSGALG00000008828 21 1.705 - - 0.907 - - - - 0.798 - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
4. PSMD4 ENSGALG00000028505 16 1.666 - - 0.913 - - 0.753 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
5. C14orf159 C14orf159 7 1.656 - - - - - 0.809 - 0.847 - -
6. TMEM230 ENSGALG00000036876 55 1.643 - - 0.904 - - - - - - 0.739 transmembrane protein 230 [Source:NCBI gene;Acc:419518]
7. PCDH7 ENSGALG00000033883 6 1.53 - - - 0.789 - 0.741 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
8. B3GNTL1 ENSGALG00000001433 22 0.952 - - 0.952 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
9. SUSD4 ENSGALG00000009388 48 0.941 - - 0.941 - - - - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
10. REEP2 ENSGALG00000017365 338 0.937 - - 0.937 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
11. KIAA2018 KIAA2018 67 0.936 - - - - - 0.936 - - - -
12. ABI2 ENSGALG00000008714 27 0.927 - - - - - - - 0.927 - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
13. ENSGALG00000021882 ENSGALG00000021882 63 0.925 - - 0.925 - - - - - - -
14. KIAA1549 ENSGALG00000012796 60 0.924 - - 0.924 - - - - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
15. SPTSSBL ENSGALG00000026131 70 0.919 - - 0.919 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
16. ANKRD42 8 0.919 - - 0.919 - - - - - - - ankyrin repeat domain 42
17. LHX6 ENSGALG00000001347 7 0.919 - - 0.919 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
18. ENSGALG00000000407 ENSGALG00000000407 32 0.918 - - 0.918 - - - - - - -
19. ZBTB21 ENSGALG00000016147 13 0.917 - - 0.917 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
20. HOXA9 ENSGALG00000028983 9298 0.916 - - 0.916 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
21. PLAG1 ENSGALG00000015407 17 0.916 - - 0.916 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
22. ENSGALG00000026975 ENSGALG00000026975 8 0.915 - - 0.915 - - - - - - -
23. LRRC56 ENSGALG00000041955 16 0.915 - - 0.915 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
24. MAP3K3 ENSGALG00000000525 115 0.913 - - - - - - - 0.913 - - mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
25. TSPAN18 ENSGALG00000036901 14 0.91 - - 0.910 - - - - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
26. DNAH7 ENSGALG00000007841 32 0.909 - - 0.909 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
27. YDJC ENSGALG00000029198 14 0.909 - - 0.909 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
28. BNC2 ENSGALG00000015101 115 0.909 - - - - - 0.909 - - - - basonuclin 2 [Source:HGNC Symbol;Acc:HGNC:30988]
29. FGD4 ENSGALG00000012932 50 0.907 - - - - - - - 0.907 - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
30. SATB2 ENSGALG00000008135 347 0.907 - - 0.907 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
31. XYLT1 ENSGALG00000006757 169 0.899 - - 0.899 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
32. SMAD3 ENSGALG00000035701 161 0.897 - - - - - 0.897 - - - - SMAD family member 3 [Source:NCBI gene;Acc:395132]
33. EHD4 ENSGALG00000008950 22 0.896 - - - - - - - 0.896 - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
34. HBE1 ENSGALG00000028273 189 0.896 - - - - - - - 0.896 - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
35. ZEB2 ENSGALG00000040465 315 0.896 - - - - - - - 0.896 - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
36. MMP9 ENSGALG00000006992 78 0.892 - - 0.892 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
37. ENSGALG00000006278 ENSGALG00000006278 202 0.892 - - 0.892 - - - - - - -
38. ENSGALG00000029120 ENSGALG00000029120 73 0.892 - - 0.892 - - - - - - -
39. FNDC7 ENSGALG00000001983 24 0.891 - - 0.891 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
40. C1orf131 C1orf131 141 0.889 - - 0.889 - - - - - - -
41. MUC5B MUC5B 62 0.888 - - - - - - - 0.888 - -
42. TMEM150C ENSGALG00000011175 218 0.885 - - 0.885 - - - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
43. PRKCZ ENSGALG00000001270 12 0.883 - - 0.883 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
44. IQGAP1 ENSGALG00000030162 1047 0.883 - - 0.883 - - - - - - - IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
45. MTMR10 85 0.878 - - 0.878 - - - - - - - myotubularin related protein 10
46. CYP3A4 ENSGALG00000004436 75 0.875 - - 0.875 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
47. SLCO4C1 ENSGALG00000026768 30 0.874 - - 0.874 - - - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
48. SAMSN1 ENSGALG00000040926 88 0.872 - - 0.872 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
49. NSL1/DC31 NSL1/DC31 43 0.868 - - 0.868 - - - - - - -
50. DSG2 ENSGALG00000015142 67 0.863 - - 0.863 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
51. LRP1B ENSGALG00000012407 125 0.863 - - 0.863 - - - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
52. CITED2 ENSGALG00000013818 4 0.862 - - - - - - - 0.862 - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
53. DINB1 DINB1 113 0.857 - - 0.857 - - - - - - -
54. LCOR ENSGALG00000028512 30 0.857 - - 0.857 - - - - - - - ligand dependent nuclear receptor corepressor, transcript variant X16
55. MAP3K8 ENSGALG00000007356 188 0.85 - - - - - 0.850 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
56. SLC9A7 ENSGALG00000016734 146 0.848 - - 0.848 - - - - - - - solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]
57. RALGPS1_1 ENSGALG00000000906 7 0.847 - - - - - - - 0.847 - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
58. ICMT ENSGALG00000024053 10 0.847 - - - - - - - 0.847 - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
59. PRDM8 ENSGALG00000038372 928 0.847 - - - - - - - 0.847 - - PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
60. STAM2 ENSGALG00000012513 9 0.847 - - - - - - - 0.847 - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
61. gga-mir-30d ENSGALG00000018290 9 0.847 - - - - - - - 0.847 - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
62. ADAM33 ENSGALG00000030602 7 0.847 - - - - - - - 0.847 - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
63. PLCL1 ENSGALG00000008113 23 0.847 - - - - - - - 0.847 - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
64. PIT-1 PIT-1 8 0.847 - - - - - - - 0.847 - -
65. HSD3B7 ENSGALG00000045366 12 0.847 - - - - - - - 0.847 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
66. IL4 ENSGALG00000006827 2 0.847 - - - - - - - 0.847 - - interleukin 4 [Source:NCBI gene;Acc:416330]
67. DBX1 ENSGALG00000003965 1432 0.847 - - - - - - - 0.847 - - developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
68. NFAM1 ENSGALG00000011872 1 0.847 - - - - - - - 0.847 - - NFAT activating protein with ITAM motif 1, transcript variant X1
69. KCNJ16 ENSGALG00000004373 6 0.846 - - - - - - - 0.846 - - potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
70. ITPKB ENSGALG00000009068 324 0.844 - - 0.844 - - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
71. SUPT7L ENSGALG00000010048 8 0.844 - - - - - - - 0.844 - - SPT7 like, STAGA complex gamma subunit [Source:HGNC Symbol;Acc:HGNC:30632]
72. CCDC112 ENSGALG00000045092 38 0.844 - - - - - - - 0.844 - - coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
73. INSRR ENSGALG00000013253 54 0.844 - - - - - - - 0.844 - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
74. PCCA ENSGALG00000016872 103 0.844 - - - - - - - 0.844 - - propionyl-CoA carboxylase subunit alpha [Source:HGNC Symbol;Acc:HGNC:8653]
75. BDH1B ENSGALG00000006976 9 0.844 - - - - - - - 0.844 - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
76. NMRK1 ENSGALG00000015156 88 0.843 - - 0.843 - - - - - - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
77. HES6 ENSGALG00000028415 4830 0.841 - - - - - - - 0.841 - - hes family bHLH transcription factor 6
78. IMPG2 ENSGALG00000015322 74 0.841 - - 0.841 - - - - - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
79. OSGIN2 ENSGALG00000042840 83 0.841 - - - - - - - 0.841 - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
80. PLEKHJ1 ENSGALG00000000835 55 0.84 - - 0.840 - - - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
81. ENSGALG00000012463 ENSGALG00000012463 242 0.839 - - - - - - - 0.839 - -
82. FADD ENSGALG00000007625 142 0.838 - - - - - - - 0.838 - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
83. SYNJ2 ENSGALG00000013727 17 0.838 - - - - - - - 0.838 - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
84. FAM19A1 32 0.838 - - - - - - - 0.838 - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
85. TPST2 ENSGALG00000005626 945 0.836 - - 0.836 - - - - - - - tyrosylprotein sulfotransferase 2 [Source:NCBI gene;Acc:416910]
86. MATN4 ENSGALG00000004028 15 0.836 - - - - - - - - - 0.836 matrilin 4 [Source:HGNC Symbol;Acc:HGNC:6910]
87. CCDC157 ENSGALG00000007907 10 0.835 - - - - - - - - - 0.835 coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
88. LOC769139 ENSGALG00000026754 753 0.833 - - 0.833 - - - - - - - feather keratin 1-like, transcript variant X2
89. UBE3C ENSGALG00000006461 57 0.832 - - 0.832 - - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
90. SBF2 ENSGALG00000005716 134 0.831 - - 0.831 - - - - - - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
91. C3ORF64 C3ORF64 49 0.831 - - 0.831 - - - - - - -
92. WDR48 ENSGALG00000006052 3575 0.829 - - 0.829 - - - - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
93. MGST2 ENSGALG00000009803 427 0.828 - - 0.828 - - - - - - - microsomal glutathione S-transferase 2 [Source:HGNC Symbol;Acc:HGNC:7063]
94. TRPV6 ENSGALG00000014746 3 0.827 - - - - - 0.827 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
95. MDM2 ENSGALG00000009942 397 0.827 - - 0.827 - - - - - - - MDM2 proto-oncogene [Source:NCBI gene;Acc:395609]
96. ASB15 ENSGALG00000008814 7 0.827 - - - - - 0.827 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
97. C15orf60 C15orf60 16 0.827 - - - - - 0.827 - - - -
98. REM1 ENSGALG00000045602 4 0.827 - - - - - 0.827 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
99. LCT ENSGALG00000012260 21 0.827 - - - - - 0.827 - - - - lactase [Source:NCBI gene;Acc:424294]
100. RGS16 ENSGALG00000033535 139 0.827 - - - - - - 0.827 - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]

There are 227 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA