Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ITGB1

Gene Name Gene ID Reads Annotation
ITGB1 ENSGALG00000007145 19551 integrin subunit beta 1 [Source:NCBI gene;Acc:374058]











Genes with expression patterns similar to ITGB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ITGB1 ENSGALG00000007145 19551 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
2. EHD3 ENSGALG00000009086 14407 1.573 - - - - 0.700 - 0.873 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
3. TUBB6 ENSGALG00000031275 17690 1.564 - - - - - - 0.825 - 0.739 - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
4. SHISA5 ENSGALG00000004661 8573 1.558 - - - - 0.748 - 0.810 - - - shisa family member 5 [Source:NCBI gene;Acc:415948]
5. COL5A2 ENSGALG00000031112 18358 1.543 - - - - - - 0.839 - 0.704 - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
6. PPIH ENSGALG00000004874 25558 1.525 - - - - - - 0.762 - - 0.763 peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
7. CD151 ENSGALG00000006856 5581 1.515 - - - - - - 0.814 - 0.701 - CD151 molecule (Raph blood group) [Source:NCBI gene;Acc:423105]
8. CRTAP ENSGALG00000034163 6453 1.497 - - - - - - 0.766 - - 0.731 cartilage associated protein [Source:NCBI gene;Acc:395992]
9. ER81 ER81 3714 1.497 - - - - - - 0.743 - - 0.754
10. CKAP5 ENSGALG00000008325 8494 1.462 - - - - - 0.710 0.752 - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
11. GMNN ENSGALG00000013626 15838 1.457 - - - - - - 0.713 0.744 - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
12. RCSD1 ENSGALG00000040275 6581 1.408 - - 0.705 - - - 0.703 - - - RCSD domain containing 1 [Source:NCBI gene;Acc:418443]
13. UTP11L UTP11L 11927 0.906 - - - - - - 0.906 - - -
14. SKAP2 ENSGALG00000030081 13746 0.887 - - - - - - 0.887 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
15. EIF4A2 ENSGALG00000008684 58507 0.886 - - - - - - 0.886 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
16. PSMB2 ENSGALG00000026421 51885 0.884 - - - - - - 0.884 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
17. SSR3 ENSGALG00000028683 24334 0.884 - - - - - - 0.884 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
18. YWHAZ ENSGALG00000031387 84985 0.884 - - - - - - 0.884 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
19. TMEM167A ENSGALG00000027332 13862 0.883 - - - - - - 0.883 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
20. KIF13A ENSGALG00000012689 119 0.882 - - - - - 0.882 - - - - kinesin family member 13A [Source:HGNC Symbol;Acc:HGNC:14566]
21. UCHL3 ENSGALG00000016921 16208 0.882 - - - - - - 0.882 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
22. PHLDB2 ENSGALG00000015377 8560 0.88 - - - - - - 0.880 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
23. FKBP12 FKBP12 64317 0.879 - - - - - - 0.879 - - -
24. CENPP ENSGALG00000004687 6707 0.876 - - - - - - 0.876 - - - centromere protein P [Source:NCBI gene;Acc:415952]
25. DERL1 ENSGALG00000033950 15074 0.873 - - - - - - 0.873 - - - derlin 1 [Source:NCBI gene;Acc:420350]
26. ACTN1 ENSGALG00000042458 10477 0.873 - - - - - - 0.873 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
27. GPC4 ENSGALG00000006080 56498 0.871 - - - - - - 0.871 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
28. CSE1L ENSGALG00000004707 20653 0.87 - - - - - - 0.870 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
29. AP2A2 ENSGALG00000006799 13874 0.87 - - - - - - 0.870 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
30. PMPCA ENSGALG00000001950 6766 0.869 - - - - - - 0.869 - - - peptidase, mitochondrial processing alpha subunit [Source:NCBI gene;Acc:417134]
31. HSPA4 ENSGALG00000040882 20966 0.867 - - - - - - 0.867 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
32. PPP1R2 ENSGALG00000029789 11594 0.867 - - - - - - 0.867 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
33. SEC63 ENSGALG00000015308 11596 0.865 - - - - - - 0.865 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
34. BRP44 BRP44 17093 0.864 - - - - - - 0.864 - - -
35. TAB2 ENSGALG00000012356 3467 0.864 - - - - - - 0.864 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
36. PLRG1 ENSGALG00000009257 8613 0.864 - - - - - - 0.864 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
37. SNRNP40 ENSGALG00000000615 32298 0.864 - - - - - - 0.864 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
38. UMPS ENSGALG00000011770 11331 0.861 - - - - - - 0.861 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
39. ENSGALG00000017396 ENSGALG00000017396 9028 0.86 - - - - - - 0.860 - - -
40. C11H16ORF80 C11H16ORF80 18673 0.86 - - - - - - 0.860 - - -
41. SMC4 ENSGALG00000009553 15715 0.859 - - - - - - 0.859 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
42. GGA.1330 GGA.1330 11281 0.857 - - - - - - 0.857 - - -
43. CRLS1 ENSGALG00000009214 8652 0.857 - - - - - - 0.857 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
44. RANBP1 ENSGALG00000002107 17715 0.856 - - - - - - 0.856 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
45. ADI1 ENSGALG00000025796 8636 0.855 - - - - - - 0.855 - - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
46. MCTS1 ENSGALG00000008517 27514 0.855 - - - - - - 0.855 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
47. LIMD1 ENSGALG00000035623 7282 0.855 - - - - - - 0.855 - - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
48. DPYSL2 ENSGALG00000000227 9668 0.853 - - - - - - 0.853 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
49. NOC4L ENSGALG00000002272 9644 0.851 - - - - - - 0.851 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
50. CDC45 ENSGALG00000001616 8432 0.851 - - - - - - 0.851 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
51. BSG ENSGALG00000001328 37947 0.85 - - - - - - 0.850 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
52. C9orf91 C9orf91 629 0.85 - - - - - 0.850 - - - -
53. GABARAPL2 ENSGALG00000003208 9195 0.849 - - - - - - 0.849 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
54. CIB1 ENSGALG00000008302 13946 0.848 - - - - - - 0.848 - - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
55. PREP ENSGALG00000015405 17050 0.848 - - - - - - 0.848 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
56. GLRX3 ENSGALG00000010464 22578 0.847 - - - - - - 0.847 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
57. ATP2B1 ENSGALG00000030550 15123 0.846 - - - - - - 0.846 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
58. APPBP2 ENSGALG00000005314 6447 0.846 - - - - - - 0.846 - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
59. DLD ENSGALG00000007931 11011 0.845 - - - - - - 0.845 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
60. AHCTF1 ENSGALG00000010630 4809 0.844 - - - - - - 0.844 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
61. SPCS3 ENSGALG00000010839 19106 0.844 - - - - - - 0.844 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
62. GSPT1 15580 0.844 - - - - - - 0.844 - - - G1 to S phase transition 1, transcript variant X1
63. LAPTM4A ENSGALG00000016479 15973 0.843 - - - - - - 0.843 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
64. gga-mir-1778 ENSGALG00000025181 8765 0.842 - - - - - - 0.842 - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
65. C6ORF162 C6ORF162 4217 0.842 - - - - - - 0.842 - - -
66. FAM63B 3793 0.841 - - - - - - 0.841 - - - family with sequence similarity 63 member B
67. RAB10 ENSGALG00000016535 5272 0.838 - - - - - - 0.838 - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
68. NDUFA12 ENSGALG00000011325 19807 0.837 - - - - - - 0.837 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
69. TOR1AIP1 ENSGALG00000029238 5843 0.837 - - - - - - 0.837 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
70. DCAF7 ENSGALG00000000510 8681 0.837 - - - - - - 0.837 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
71. TPRG1L ENSGALG00000001024 9809 0.836 - - - - - - 0.836 - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
72. EVA1CL ENSGALG00000004734 168 0.836 - - - - - 0.836 - - - - protein eva-1 homolog C-like, transcript variant X2
73. R3HDM1 ENSGALG00000012246 6580 0.836 - - - - - - 0.836 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
74. TMEM184C ENSGALG00000010019 7856 0.835 - - - - - - 0.835 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
75. MTCH2 ENSGALG00000036196 15097 0.835 - - - - - - 0.835 - - - mitochondrial carrier 2 [Source:NCBI gene;Acc:395597]
76. CYC CYC 8740 0.834 - - - - - - 0.834 - - -
77. PCDH12 ENSGALG00000002544 36 0.834 - - - - - 0.834 - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
78. CDK2AP1 ENSGALG00000034919 5469 0.834 - - - - - - 0.834 - - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
79. INCENP ENSGALG00000007537 16617 0.834 - - - - - - 0.834 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
80. TTC37 ENSGALG00000014670 5715 0.833 - - - - - - 0.833 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
81. KDELR2 ENSGALG00000040793 29669 0.833 - - - - - - 0.833 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
82. C4H4ORF52 C4H4ORF52 8116 0.832 - - - - - - 0.832 - - -
83. C2orf50 ENSGALG00000046449 17 0.832 - - - - - 0.832 - - - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
84. HAPLN1 ENSGALG00000015627 14942 0.832 - - - - - - 0.832 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
85. FCF1 ENSGALG00000010275 24928 0.832 - - - - - - 0.832 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
86. LCLAT1 ENSGALG00000009056 5207 0.83 - - - - - - 0.830 - - - lysocardiolipin acyltransferase 1 [Source:NCBI gene;Acc:421303]
87. TXNDC17 ENSGALG00000027950 45004 0.83 - - - - - - 0.830 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
88. PARP1 ENSGALG00000009228 39433 0.83 - - - - - - 0.830 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
89. GMPPB ENSGALG00000002500 9454 0.829 - - - - - - 0.829 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
90. RDH10 ENSGALG00000034346 15285 0.829 - - - - - - 0.829 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
91. C3AR1 ENSGALG00000013218 32 0.829 - - - - - 0.829 - - - - complement C3a receptor 1 [Source:NCBI gene;Acc:418198]
92. AKAP1 ENSGALG00000005575 12051 0.829 - - - - - - 0.829 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
93. TMEM70 ENSGALG00000033568 10720 0.828 - - - - - - 0.828 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
94. C1QBP ENSGALG00000001654 34814 0.827 - - - - - - 0.827 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
95. MED27 ENSGALG00000003683 6808 0.827 - - - - - - 0.827 - - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
96. RABGGTB ENSGALG00000011388 11654 0.827 - - - - - - 0.827 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
97. MAP3K7 ENSGALG00000015596 15164 0.827 - - - - - - 0.827 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
98. KIAA1919 KIAA1919 58 0.827 - - - - - 0.827 - - - -
99. SCCPDH ENSGALG00000010641 8624 0.827 - - - - - - 0.827 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
100. RIOK2 ENSGALG00000015288 6280 0.827 - - - - - - 0.827 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]

There are 838 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA