Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ITGA1

Gene Name Gene ID Reads Annotation
ITGA1 ENSGALG00000014891 11378 integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]











Genes with expression patterns similar to ITGA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ITGA1 ENSGALG00000014891 11378 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
2. CHNTHL1 CHNTHL1 4976 0.999 - - - - - - 0.999 - - -
3. VIMENTIN VIMENTIN 33105 0.997 - - - - - - - 0.997 - -
4. EXOC4 ENSGALG00000008477 4684 0.997 - - - - - - - 0.997 - - exocyst complex component 4 [Source:NCBI gene;Acc:416700]
5. PRKRIP1 ENSGALG00000001833 5092 0.997 - - - - - - - 0.997 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
6. KIAA1598 KIAA1598 989 0.996 - - - - - - - 0.996 - -
7. TCTN3 ENSGALG00000010517 3985 0.996 - - - - - - - 0.996 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
8. TLK2 ENSGALG00000000410 4690 0.996 - - - - - - - 0.996 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
9. PUM1 ENSGALG00000042598 9392 0.996 - - - - - - - 0.996 - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
10. SLC25A15 ENSGALG00000017032 6773 0.996 - - - - - - - 0.996 - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
11. URB1 ENSGALG00000015887 5854 0.996 - - - - - - - 0.996 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
12. SLC35E1 ENSGALG00000003794 2563 0.996 - - - - - - - 0.996 - - solute carrier family 35 member E1 [Source:HGNC Symbol;Acc:HGNC:20803]
13. PDCD2 ENSGALG00000011169 3594 0.996 - - - - - - - 0.996 - - programmed cell death 2 [Source:NCBI gene;Acc:421550]
14. LZTFL1 ENSGALG00000033928 3493 0.996 - - - - - - - 0.996 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
15. PPP1R21 ENSGALG00000008937 2343 0.996 - - - - - - - 0.996 - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
16. SLC2A10 ENSGALG00000004498 421 0.995 - - - - - - - 0.995 - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
17. ACAD8 ENSGALG00000001557 2562 0.995 - - - - - - - 0.995 - - acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
18. COX20 ENSGALG00000027440 5881 0.995 - - - - - - - 0.995 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
19. SPTAN1 ENSGALG00000004719 20251 0.995 - - - - - - - 0.995 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
20. FBN2 ENSGALG00000014686 4538 0.995 - - - - - - - 0.995 - - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
21. PKIB ENSGALG00000027036 1663 0.995 - - - - - - - 0.995 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
22. KCTD10 ENSGALG00000005138 1191 0.995 - - - - - - - 0.995 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
23. KIAA1324L ENSGALG00000030324 1695 0.995 - - - - - - - 0.995 - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
24. PLA2R1 ENSGALG00000011149 1964 0.995 - - - - - - - 0.995 - - phospholipase A2 receptor 1 [Source:NCBI gene;Acc:404304]
25. PPP2R3C ENSGALG00000010052 637 0.995 - - - - - - - 0.995 - - protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
26. CDCA9 ENSGALG00000021225 2244 0.995 - - - - - - - 0.995 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
27. KCNE3 ENSGALG00000022696 561 0.995 - - - - - - - 0.995 - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
28. DYNLL2 ENSGALG00000005522 17107 0.993 - - - - - - 0.993 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
29. ARL4A ENSGALG00000027757 4285 0.993 - - - - - - - 0.993 - - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
30. VATB VATB 13756 0.992 - - - - - - - 0.992 - -
31. AMOTL2 5217 0.992 - - - - - - - 0.992 - - angiomotin like 2, transcript variant X3
32. ABCC10 2213 0.991 - - - - - - 0.991 - - - ATP binding cassette subfamily C member 10, transcript variant X10
33. KDELR3 ENSGALG00000032313 4376 0.991 - - - - - - - 0.991 - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
34. MRPL32 ENSGALG00000037258 6861 0.991 - - - - - - 0.991 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
35. EGFLAM ENSGALG00000003726 4588 0.991 - - - - - - 0.991 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
36. BMP3 ENSGALG00000035052 3260 0.991 - - - - - - 0.991 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
37. PTBP2 ENSGALG00000005552 3443 0.991 - - - - - - 0.991 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
38. TMEM62 ENSGALG00000009260 1170 0.991 - - - - - - 0.991 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
39. TMC1 ENSGALG00000015145 1180 0.991 - - - - - - 0.991 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
40. CAND1 4541 0.991 - - - - - - 0.991 - - - cullin associated and neddylation dissociated 1
41. TMEM120B ENSGALG00000004254 2819 0.991 - - - - - - 0.991 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
42. ENSGALG00000014190 ENSGALG00000014190 5735 0.991 - - - - - - 0.991 - - -
43. TMEM97 ENSGALG00000005702 2037 0.991 - - - - - - 0.991 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
44. CTU2 4818 0.991 - - - - - - 0.991 - - - cytosolic thiouridylase subunit 2, transcript variant X3
45. POLR1C ENSGALG00000010349 7059 0.99 - - - - - - 0.990 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
46. HOXD8 ENSGALG00000037272 4338 0.99 - - - - - - 0.990 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
47. M6PR ENSGALG00000031681 9442 0.99 - - - - - - 0.990 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
48. IMP4 ENSGALG00000029152 11669 0.989 - - - - - - 0.989 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
49. MOB3A ENSGALG00000031729 9690 0.989 - - - - - - 0.989 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
50. ENSGALG00000004773 ENSGALG00000004773 10418 0.989 - - - - - - 0.989 - - -
51. MYO1B ENSGALG00000007712 8755 0.988 - - - - - - - 0.988 - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
52. EIF3J ENSGALG00000008187 43570 0.987 - - - - - - 0.987 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
53. PHGDH ENSGALG00000002988 6912 0.987 - - - - - - 0.987 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
54. POLR2D ENSGALG00000002057 14548 0.986 - - - - - - 0.986 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
55. MCM2 ENSGALG00000006037 13458 0.983 - - - - - - 0.983 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
56. PFDN4 ENSGALG00000007792 26514 0.982 - - - - - - 0.982 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
57. FBN3 ENSGALG00000037625 23313 0.981 - - - - - - 0.981 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
58. PRDX6 ENSGALG00000003053 17928 0.981 - - - - - - 0.981 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
59. KBTBD2 ENSGALG00000038704 2821 0.979 - - - - - - - 0.979 - - kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]
60. FAM103A1 17380 0.979 - - - - - - 0.979 - - - family with sequence similarity 103 member A1, transcript variant X2
61. ATP5MC1 ENSGALG00000001330 37766 0.978 - - - - - - 0.978 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
62. DDX21 ENSGALG00000004144 13105 0.978 - - - - - - 0.978 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
63. DGKD ENSGALG00000001730 4456 0.977 - - - - - - - 0.977 - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
64. CDC45 ENSGALG00000001616 8432 0.974 - - - - - - - 0.974 - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
65. SMC2 ENSGALG00000015691 34013 0.973 - - - - - - 0.973 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
66. AATF ENSGALG00000005420 6501 0.973 - - - - - - - 0.973 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
67. ENSGALG00000004132 ENSGALG00000004132 9287 0.972 - - - - - - - 0.972 - -
68. DENR ENSGALG00000003795 30805 0.969 - - - - - - 0.969 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
69. RAE1 ENSGALG00000007653 8930 0.967 - - - - - - - 0.967 - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
70. STRN ENSGALG00000010580 7561 0.965 - - - - - - - 0.965 - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
71. GPATCH2 ENSGALG00000009627 4061 0.965 - - - - - - - 0.965 - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
72. IGF2BP1 ENSGALG00000041204 6420 0.963 - - - - - - - 0.963 - - insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
73. MRPS18A ENSGALG00000010296 11039 0.96 - - - - - - - 0.960 - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
74. KLF10 ENSGALG00000037913 3529 0.959 - - - - - - - 0.959 - - Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]
75. UCH-L1 UCH-L1 12697 0.956 - - - - - - - 0.956 - -
76. MZT1 ENSGALG00000016932 9269 0.955 - - - - - - - 0.955 - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
77. CHMP1A ENSGALG00000006161 4195 0.95 - - - - - - - 0.950 - - charged multivesicular body protein 1A [Source:NCBI gene;Acc:415841]
78. CYTL1 ENSGALG00000015015 4438 0.949 - - - - - - - 0.949 - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
79. CPSF6 ENSGALG00000019355 7634 0.948 - - - - - - - 0.948 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
80. ALDH1A2 ENSGALG00000004270 49483 0.946 - - - - - - 0.946 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
81. HIBCH ENSGALG00000043307 11990 0.944 - - - - - - - 0.944 - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
82. INPP5E ENSGALG00000001964 3580 0.932 - - - - - - - 0.932 - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
83. CYB5A ENSGALG00000013708 8287 0.927 - - - - - - - 0.927 - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
84. FAM110A ENSGALG00000046425 5558 0.926 - - - - - - - 0.926 - - family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
85. CALM_1 CALM_1 57812 0.915 - - - - - - 0.915 - - -
86. ORC5 ENSGALG00000008175 3426 0.913 - - - - - - - 0.913 - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
87. DNAJC1 ENSGALG00000007914 8028 0.909 - - - - - - - 0.909 - - DnaJ heat shock protein family (Hsp40) member C1 [Source:HGNC Symbol;Acc:HGNC:20090]
88. ATP2A2 ENSGALG00000032287 12734 0.908 - - - - - - 0.908 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
89. MTHFD1 ENSGALG00000011797 11001 0.908 - - - - - - - 0.908 - - methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
90. PPIC ENSGALG00000005346 5002 0.907 - - - - - - - 0.907 - - peptidylprolyl isomerase C [Source:HGNC Symbol;Acc:HGNC:9256]
91. TMEM30A ENSGALG00000015904 8533 0.906 - - - - - - - 0.906 - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
92. VPS35 ENSGALG00000004375 8059 0.903 - - - - - - - 0.903 - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
93. TBL1X ENSGALG00000040006 28597 0.899 - - - - - - - 0.899 - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
94. VDAC3 ENSGALG00000041463 21595 0.895 - - - - - - - 0.895 - - voltage dependent anion channel 3, transcript variant X9
95. UQCRFS1 ENSGALG00000025819 66637 0.884 - - - - - - 0.884 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
96. MTX2 ENSGALG00000009264 17304 0.879 - - - - - - - 0.879 - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
97. ZNF644 ENSGALG00000034253 28348 0.874 - - - - - - - 0.874 - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
98. RRP9 ENSGALG00000043359 9747 0.869 - - - - - - - 0.869 - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
99. PITPNB ENSGALG00000005654 21578 0.868 - - - - - - - 0.868 - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
100. BIRC5 ENSGALG00000008713 46856 0.863 - - - - - - - 0.863 - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]

There are 45 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA