Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ISM1

Gene Name Gene ID Reads Annotation
ISM1 ENSGALG00000009042 196 isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]











Genes with expression patterns similar to ISM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ISM1 ENSGALG00000009042 196 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
2. ZIC3 ENSGALG00000031144 863 2.569 - - - 0.722 0.944 0.903 - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
3. OLIG3 ENSGALG00000013862 51 2.365 - - - 0.866 - 0.754 - - - 0.745 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
4. GHOX-7 GHOX-7 2555 1.915 - - - 0.928 - 0.987 - - - -
5. WNT4 ENSGALG00000041708 1277 1.791 - - - 0.847 - 0.944 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
6. DENND5B 4077 1.696 - - - - 0.831 0.865 - - - - DENN domain containing 5B, transcript variant X1
7. ENSGALG00000026584 ENSGALG00000026584 77 1.65 - - - - 0.949 0.701 - - - -
8. MSX2 ENSGALG00000038848 6950 1.646 - - - - 0.861 0.785 - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
9. BMP7 ENSGALG00000007668 6645 1.631 - - - - 0.804 0.827 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
10. JAM2 ENSGALG00000015746 514 1.585 - - - - 0.803 0.782 - - - - junctional adhesion molecule 2 [Source:NCBI gene;Acc:418476]
11. WNT3 ENSGALG00000001079 8 1.569 - - - 0.815 - 0.754 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
12. ENSGALG00000006495 ENSGALG00000006495 4 1.569 - - - 0.815 - 0.754 - - - -
13. ERRFI1 ENSGALG00000000535 83 1.563 - - - 0.761 0.802 - - - - - ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
14. OLFM1 ENSGALG00000002515 1841 1.561 - - - 0.827 0.734 - - - - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
15. NDP ENSGALG00000016222 1067 1.545 - - - 0.831 - 0.714 - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
16. PCDH8 ENSGALG00000036258 1945 1.507 - - - - 0.727 0.780 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
17. ANKFN1 ENSGALG00000003105 15 1.499 - - - - - 0.754 - - - 0.745 ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
18. GNG10 ENSGALG00000015683 6905 1.487 - - - - 0.746 0.741 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
19. TRABD2A ENSGALG00000026395 704 0.979 - - - - - 0.979 - - - - TraB domain containing 2A, transcript variant X3
20. LRRC4C ENSGALG00000007948 9 0.969 - - - - - 0.969 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
21. IPMK ENSGALG00000002710 40 0.969 - - - 0.969 - - - - - - inositol polyphosphate multikinase [Source:HGNC Symbol;Acc:HGNC:20739]
22. CFTR ENSGALG00000032986 424 0.919 - - - - - 0.919 - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
23. LTK ENSGALG00000008615 33 0.909 - - - 0.909 - - - - - - leukocyte receptor tyrosine kinase
24. C9orf171 C9orf171 35 0.909 - - - - 0.909 - - - - -
25. ACP2 ENSGALG00000008211 77 0.908 - - - - 0.908 - - - - - acid phosphatase 2, lysosomal [Source:NCBI gene;Acc:428864]
26. SMCR8 ENSGALG00000024082 44 0.908 - - - - 0.908 - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
27. ENSGALG00000015097 ENSGALG00000015097 93 0.907 - - - - 0.907 - - - - -
28. ST8SIA1 ENSGALG00000013211 14 0.903 - - - - 0.903 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
29. BTBD19 ENSGALG00000028978 20 0.903 - - - - 0.903 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
30. CDH6 ENSGALG00000012917 17 0.903 - - - - 0.903 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
31. ZIC1 ENSGALG00000040532 6543 0.894 - - - - - 0.894 - - - - Zic family member 1 [Source:NCBI gene;Acc:374103]
32. CLGN ENSGALG00000009826 54 0.892 - - - - 0.892 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
33. LRRK2 ENSGALG00000007161 66 0.892 - - - - 0.892 - - - - - leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
34. MMP23B ENSGALG00000001392 53 0.888 - - - - 0.888 - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
35. DRAXIN ENSGALG00000004631 3122 0.888 - - - - - 0.888 - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
36. NPAS3 ENSGALG00000029022 1950 0.887 - - - - - 0.887 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
37. NUAK1 ENSGALG00000012662 411 0.886 - - - - 0.886 - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
38. IWS1 ENSGALG00000001803 2305 0.885 - - - - 0.885 - - - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
39. LAPTM5 ENSGALG00000038636 18 0.885 - - - - 0.885 - - - - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
40. CERKL ENSGALG00000008910 70 0.882 - - - - 0.882 - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
41. UNK ENSGALG00000002278 55 0.879 - - - - 0.879 - - - - - unkempt family zinc finger [Source:HGNC Symbol;Acc:HGNC:29369]
42. CXCR4 ENSGALG00000012357 1320 0.877 - - - - - 0.877 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
43. BATF ENSGALG00000010323 96 0.876 - - - - 0.876 - - - - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
44. PLXNA4 ENSGALG00000006473 125 0.872 - - - - 0.872 - - - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
45. LHFP 167 0.872 - - - - 0.872 - - - - - lipoma HMGIC fusion partner
46. COG2 ENSGALG00000011114 522 0.872 - - - - 0.872 - - - - - component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:HGNC:6546]
47. HLF ENSGALG00000003059 148 0.871 - - - - - - - 0.871 - - HLF, PAR bZIP transcription factor [Source:HGNC Symbol;Acc:HGNC:4977]
48. EMP1 ENSGALG00000011803 351 0.866 - - - - 0.866 - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
49. NMRK2 ENSGALG00000025751 57 0.865 - - - - 0.865 - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
50. ALPI ENSGALG00000023866 19 0.864 - - - - 0.864 - - - - - alkaline phosphatase, intestinal, transcript variant X2
51. EDIL3 ENSGALG00000015630 7 0.864 - - - - - 0.864 - - - - EGF like repeats and discoidin domains 3 [Source:HGNC Symbol;Acc:HGNC:3173]
52. KANSL1L ENSGALG00000002866 44 0.864 - - - - - 0.864 - - - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
53. MAK ENSGALG00000012770 32 0.862 - - - - - 0.862 - - - - male germ cell associated kinase [Source:HGNC Symbol;Acc:HGNC:6816]
54. PLCH2 ENSGALG00000001207 7 0.862 - - - - - 0.862 - - - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
55. SLC7A11 ENSGALG00000009758 104 0.858 - - - - - 0.858 - - - - solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]
56. LCAT ENSGALG00000028928 484 0.852 - - - - 0.852 - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
57. AGO1 ENSGALG00000002249 125 0.852 - - - 0.852 - - - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
58. GRM1 ENSGALG00000012297 41 0.851 - - - - 0.851 - - - - - glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
59. AGMO ENSGALG00000010792 76 0.848 - - - - 0.848 - - - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
60. DCLK1 ENSGALG00000041263 40 0.847 - - - - 0.847 - - - - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
61. SORCS3 ENSGALG00000008434 136 0.842 - - - - 0.842 - - - - - sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
62. BOC ENSGALG00000015152 4868 0.842 - - - - 0.842 - - - - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
63. TIGD3 TIGD3 36 0.838 - - - - 0.838 - - - - -
64. LIPG ENSGALG00000043734 2490 0.838 - - - - - 0.838 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
65. HMP19 ENSGALG00000028602 1604 0.833 - - - - 0.833 - - - - - Gallus gallus HMP19 protein (HMP19), mRNA. [Source:RefSeq mRNA;Acc:NM_001326465]
66. NSG1 ENSGALG00000015010 5829 0.828 - - - - - 0.828 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
67. TNPO1 ENSGALG00000015014 57 0.827 - - - - 0.827 - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
68. TMEM150C ENSGALG00000011175 218 0.826 - - - - 0.826 - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
69. STC2 ENSGALG00000002893 2119 0.825 - - - - 0.825 - - - - - stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]
70. KCNG1 ENSGALG00000007980 26 0.822 - - - - 0.822 - - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
71. TFAP2C ENSGALG00000007690 768 0.822 - - - - 0.822 - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
72. CEP135 ENSGALG00000013776 232 0.819 - - - - - - - 0.819 - - centrosomal protein 135 [Source:HGNC Symbol;Acc:HGNC:29086]
73. ENSGALG00000026351 ENSGALG00000026351 49 0.816 - - - - - 0.816 - - - -
74. GNPTG ENSGALG00000006441 50 0.816 - - - - - - - 0.816 - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
75. LRRC47 7 0.815 - - - 0.815 - - - - - - leucine rich repeat containing 47
76. DTX4 ENSGALG00000010835 25 0.815 - - - 0.815 - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
77. BTBD2 ENSGALG00000001019 510 0.815 - - - 0.815 - - - - - - BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15504]
78. RAB11FIP5 1 0.815 - - - 0.815 - - - - - - RAB11 family interacting protein 5, transcript variant X1
79. LHFPL2 ENSGALG00000004437 500 0.815 - - - 0.815 - - - - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
80. ENSGALG00000023046 ENSGALG00000023046 1 0.815 - - - 0.815 - - - - - -
81. ENSGALG00000027565 ENSGALG00000027565 2 0.815 - - - 0.815 - - - - - -
82. KLHL14 ENSGALG00000036969 3 0.815 - - - 0.815 - - - - - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
83. RPUSD2 ENSGALG00000041216 9 0.815 - - - 0.815 - - - - - - RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
84. ENSGALG00000027405 ENSGALG00000027405 1 0.815 - - - 0.815 - - - - - -
85. WNT3A ENSGALG00000042657 22 0.815 - - - 0.815 - - - - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
86. ASB7 ENSGALG00000007115 3 0.815 - - - 0.815 - - - - - - ankyrin repeat and SOCS box containing 7 [Source:NCBI gene;Acc:415518]
87. GPR98 GPR98 22 0.815 - - - 0.815 - - - - - -
88. TMEM11 ENSGALG00000004749 206 0.815 - - - 0.815 - - - - - - transmembrane protein 11 [Source:NCBI gene;Acc:427663]
89. CAV3 ENSGALG00000008351 16 0.815 - - - 0.815 - - - - - - caveolin 3 [Source:NCBI gene;Acc:378796]
90. PLD5 ENSGALG00000010737 5 0.815 - - - 0.815 - - - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
91. ENSGALG00000013912 ENSGALG00000013912 3 0.815 - - - 0.815 - - - - - -
92. PSTPIP1 ENSGALG00000002786 9 0.814 - - 0.814 - - - - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
93. PANK2 ENSGALG00000015978 753 0.808 - - - - 0.808 - - - - - pantothenate kinase 2 [Source:HGNC Symbol;Acc:HGNC:15894]
94. KLHDC8B ENSGALG00000006776 76 0.808 - - - - 0.808 - - - - - kelch domain containing 8B [Source:HGNC Symbol;Acc:HGNC:28557]
95. CHST1 ENSGALG00000008440 156 0.807 - - - - - 0.807 - - - - carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
96. ENSGALG00000027399 ENSGALG00000027399 108 0.805 - - - - 0.805 - - - - -
97. ARFGEF1 ENSGALG00000034610 238 0.804 - - - - 0.804 - - - - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
98. FAR2 ENSGALG00000017291 16 0.804 - - 0.804 - - - - - - - fatty acyl-CoA reductase 2 [Source:HGNC Symbol;Acc:HGNC:25531]
99. DYDC1 ENSGALG00000002432 54 0.801 - - - - 0.801 - - - - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
100. GNA12 ENSGALG00000004368 692 0.799 - - - - 0.799 - - - - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]

There are 177 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA