Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ISL1

Gene Name Gene ID Reads Annotation
ISL1 ENSGALG00000014884 7666 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]











Genes with expression patterns similar to ISL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ISL1 ENSGALG00000014884 7666 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
2. MNR2 ENSGALG00000011349 3340 3.145 - - 0.825 - - - 0.752 - 0.839 0.729 homeodomain protein
3. MYT1 ENSGALG00000005932 2017 2.678 - - 0.914 - - - - - 0.841 0.923 myelin transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:7622]
4. GAP43 ENSGALG00000015089 505 2.594 - - 0.890 - - - - - 0.876 0.828 growth associated protein 43 [Source:NCBI gene;Acc:427955]
5. SCML4 ENSGALG00000015309 499 2.584 - - 0.928 - - - - - 0.839 0.817 Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
6. EF1A EF1A 2378 2.557 - - 0.819 - - - - - 0.883 0.855
7. STMN2 ENSGALG00000039690 989 2.529 - - 0.904 - - - - - 0.765 0.860 stathmin 2 [Source:NCBI gene;Acc:396095]
8. NEFL ENSGALG00000000314 4883 2.526 - - 0.729 - - - - - 0.899 0.898 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
9. SYT4 ENSGALG00000042626 384 2.503 - - 0.802 - - - - - 0.869 0.832 synaptotagmin 4 [Source:HGNC Symbol;Acc:HGNC:11512]
10. NFASC ENSGALG00000031776 4264 2.484 - - - - - - - 0.734 0.894 0.856 neurofascin [Source:NCBI gene;Acc:419824]
11. SIAT8C SIAT8C 178 2.427 - - 0.711 - - - - - 0.867 0.849
12. ELAVL4 ENSGALG00000010533 4978 2.408 - - - - - - 0.719 - 0.755 0.934 ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
13. EFCAB6 ENSGALG00000014188 139 2.391 - - 0.913 - - - - - 0.715 0.763 EF-hand calcium binding domain 6, transcript variant X3
14. MNX1 ENSGALG00000041154 244 2.343 - - 0.824 - - - - - 0.766 0.753 motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
15. GPM6A ENSGALG00000043480 2133 2.341 - - 0.731 - - - - - 0.779 0.831 glycoprotein M6A [Source:NCBI gene;Acc:422569]
16. LIX1 ENSGALG00000015290 7589 2.32 - 0.815 - 0.746 - 0.759 - - - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
17. SNAP25 ENSGALG00000009003 222 2.314 - - 0.733 - - - - - 0.733 0.848 synaptosome associated protein 25 [Source:NCBI gene;Acc:396444]
18. ECEL1 ENSGALG00000030420 670 2.274 - - 0.760 - - - - - 0.740 0.774 endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
19. NHLH1 ENSGALG00000025817 1617 2.268 - - 0.744 - - - - - 0.756 0.768 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
20. SLC10A4 ENSGALG00000033908 300 2.197 - - 0.706 - - - - - 0.704 0.787 solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
21. RTN1 ENSGALG00000012006 2438 1.784 - - - - - - - - 0.846 0.938 reticulon 1 [Source:NCBI gene;Acc:378791]
22. GRM3 ENSGALG00000006576 474 1.702 - - - - - - - - 0.819 0.883 glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
23. UTS2D UTS2D 2246 1.691 - - 0.897 - - - - - - 0.794
24. INA ENSGALG00000028238 208 1.621 - - - - - - - - 0.866 0.755 internexin neuronal intermediate filament protein alpha
25. STMN1 ENSGALG00000001475 225354 1.6 - - - - - - - - 0.781 0.819 stathmin 1 [Source:NCBI gene;Acc:396057]
26. NSG1 ENSGALG00000015010 5829 1.587 - - - - - - - - 0.797 0.790 neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
27. RUSC2 ENSGALG00000002371 272 1.583 - - - - - - - - 0.844 0.739 RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
28. ASTN1 ENSGALG00000004472 855 1.581 - - - - - - - - 0.803 0.778 astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
29. GNG2 ENSGALG00000027629 9404 1.572 - - - - - - - - 0.851 0.721 G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
30. SLC5A7 ENSGALG00000016804 93 1.567 - - - - - - - - 0.854 0.713 solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
31. ST18 ENSGALG00000015254 117 1.551 - - 0.793 - - - - - - 0.758 ST18, C2H2C-type zinc finger [Source:HGNC Symbol;Acc:HGNC:18695]
32. FABP7 ENSGALG00000038933 6780 1.546 - - - - - - - - 0.745 0.801 fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
33. NTM ENSGALG00000001437 584 1.54 - - - - - - - - 0.792 0.748 neurotrimin [Source:NCBI gene;Acc:395450]
34. TUBB2B ENSGALG00000012821 41535 1.529 - - - - - - - - 0.798 0.731 tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
35. CNTN2 ENSGALG00000000653 219 1.52 - - 0.792 - - - - - - 0.728 contactin 2 [Source:NCBI gene;Acc:419825]
36. TBC1D30 ENSGALG00000009859 994 1.497 - - - - - - - - 0.763 0.734 TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
37. MAP2 ENSGALG00000002789 6597 1.497 - - - - - - - - 0.728 0.769 microtubule associated protein 2, transcript variant X33
38. SHC2 ENSGALG00000001289 2140 1.495 - - - - - - - - 0.725 0.770 SHC (Src homology 2 domain containing) transforming protein 2, transcript variant X2
39. CDH12 ENSGALG00000012941 223 1.494 - - 0.726 - - - - - - 0.768 cadherin 12, transcript variant X8
40. TCF7L2 ENSGALG00000008883 13688 1.486 - - - 0.770 - 0.716 - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
41. TAGLN3 ENSGALG00000015379 7865 1.485 - - - - - - - - 0.702 0.783 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
42. UCH-L1 UCH-L1 12697 1.464 - - - - - - - - 0.742 0.722
43. BAI1 BAI1 235 1.457 - - - - - - - - 0.720 0.737
44. CDC20 ENSGALG00000009971 11197 0.986 - - - - - - - 0.986 - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
45. FNBP1 ENSGALG00000004088 1400 0.978 - - - - - - - 0.978 - - formin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17069]
46. BRE 10440 0.967 - - - - - - - 0.967 - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
47. POLB ENSGALG00000040828 7462 0.957 - - - - - - - 0.957 - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
48. TSSC4 ENSGALG00000006530 10413 0.937 - - - - - - - 0.937 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
49. TPRG1L ENSGALG00000001024 9809 0.934 - - - - - - - 0.934 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
50. DDX1 ENSGALG00000016461 15157 0.933 - - - - - - - 0.933 - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
51. NEFM ENSGALG00000000317 6992 0.927 - - - - - - - - - 0.927 neurofilament medium [Source:NCBI gene;Acc:396206]
52. ENPP2 ENSGALG00000032746 6086 0.901 - - - - - - - 0.901 - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
53. LMAN1 ENSGALG00000034821 12788 0.887 - - - - - - - 0.887 - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
54. NR2F1 ENSGALG00000027907 25778 0.877 - - - - - - - 0.877 - - nuclear receptor subfamily 2 group F member 1 [Source:HGNC Symbol;Acc:HGNC:7975]
55. SHISA3 ENSGALG00000026042 1108 0.868 - - 0.868 - - - - - - - shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
56. MAP1B ENSGALG00000014999 6288 0.861 - - - - - - - - - 0.861 microtubule associated protein 1B
57. EN1 ENSGALG00000042389 3051 0.851 - - - - - - - - - 0.851 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
58. MYT1L ENSGALG00000016384 147 0.851 - - - - - - - - - 0.851 myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
59. HMGCS1 ENSGALG00000014862 2846 0.847 - - - - - - - - 0.847 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
60. ATCAY ENSGALG00000001812 1454 0.843 - - - 0.843 - - - - - - ATCAY, caytaxin [Source:HGNC Symbol;Acc:HGNC:779]
61. GABRA3 ENSGALG00000007269 985 0.829 - - - - - - - - 0.829 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
62. PLPPR1 ENSGALG00000015542 3179 0.826 - - - - - - - - - 0.826 phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
63. BAMBI ENSGALG00000040993 7562 0.824 - 0.824 - - - - - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
64. HDDC2 ENSGALG00000014841 7674 0.823 - - - - - - - 0.823 - - HD domain containing 2 [Source:NCBI gene;Acc:421719]
65. LGALS3 ENSGALG00000012173 3306 0.819 - 0.819 - - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
66. SPIRE2 ENSGALG00000000521 26 0.817 - - 0.817 - - - - - - - spire type actin nucleation factor 2 [Source:HGNC Symbol;Acc:HGNC:30623]
67. FABP5 ENSGALG00000041344 3984 0.815 - - - - - - - - - 0.815 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
68. EVX1 ENSGALG00000037310 1974 0.81 - 0.810 - - - - - - - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
69. STMN3 ENSGALG00000006130 151 0.81 - - - - - - - - 0.810 - stathmin 3 [Source:NCBI gene;Acc:419263]
70. LRRN2 ENSGALG00000000639 73 0.809 - - - - - - - - 0.809 - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
71. ALCAM ENSGALG00000015348 14283 0.808 - - - - - - - - - 0.808 activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
72. PCDHA11 58 0.806 - - - - - - - - - 0.806 protocadherin alpha 11
73. FAM110A ENSGALG00000046425 5558 0.801 - - - - - - - - - 0.801 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
74. CACNG2 ENSGALG00000031977 196 0.799 - - - - - - - - 0.799 - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
75. OPRL1 ENSGALG00000027965 53 0.798 - - - - - - - - 0.798 - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
76. CRMP1B CRMP1B 18633 0.795 - - - - - - - - - 0.795
77. PNRC2 ENSGALG00000004122 19228 0.792 - - - - - - - 0.792 - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
78. NACAD 679 0.791 - - - - - - - - - 0.791 NAC alpha domain containing, transcript variant X1
79. ELOVL4 ENSGALG00000015876 853 0.787 - - - - - - - - 0.787 - ELOVL fatty acid elongase 4 [Source:NCBI gene;Acc:421850]
80. STMN4 ENSGALG00000030929 621 0.786 - - - - - - - - - 0.786 stathmin 4 [Source:HGNC Symbol;Acc:HGNC:16078]
81. SPINK7 SPINK7 254 0.785 - - 0.785 - - - - - - -
82. TUBB3 571 0.784 - - - - - - - - - 0.784 tubulin beta 3 class III
83. ARHGEF6 ENSGALG00000006439 5275 0.782 - - - - - - 0.782 - - - Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:NCBI gene;Acc:422247]
84. MLLT11 ENSGALG00000044125 1470 0.78 - - - - - - - - 0.780 - MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
85. RGMA ENSGALG00000039173 12874 0.777 - - - - - - - - - 0.777 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
86. CLVS2 ENSGALG00000014853 22 0.775 - - - - - - - - - 0.775 clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
87. RPLP0 ENSGALG00000023294 519985 0.775 - - - - - - - 0.775 - - ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
88. TMSB10 TMSB10 518 0.771 - - 0.771 - - - - - - -
89. UPK3BL ENSGALG00000001885 1650 0.77 - 0.770 - - - - - - - - uroplakin 3B-like
90. LDHA ENSGALG00000006300 4796 0.769 - - - - 0.769 - - - - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
91. GDI2 ENSGALG00000008169 67151 0.769 - - - - - - - - 0.769 - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
92. ITGA11 ENSGALG00000008007 210 0.765 - - 0.765 - - - - - - - integrin subunit alpha 11 [Source:HGNC Symbol;Acc:HGNC:6136]
93. PSMA2 ENSGALG00000039387 23620 0.764 - - - - - - - 0.764 - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
94. FAM211B FAM211B 3808 0.762 - - - - - - - - 0.762 -
95. NDP ENSGALG00000016222 1067 0.761 - 0.761 - - - - - - - - NDP, norrin cystine knot growth factor [Source:NCBI gene;Acc:418560]
96. DDX21 ENSGALG00000004144 13105 0.759 - - - - - - - 0.759 - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
97. WSCD2 ENSGALG00000004849 477 0.759 - - - - - - - - - 0.759 WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
98. MURC 3759 0.759 - - - - - - - - - 0.759 muscle related coiled-coil protein
99. ENSGALG00000024395 ENSGALG00000024395 1855 0.758 - - - - - - - - - 0.758
100. EML1 1941 0.755 - - - - - - - - - 0.755 echinoderm microtubule associated protein like 1, transcript variant X11

There are 104 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA