Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ISCA1

Gene Name Gene ID Reads Annotation
ISCA1 ENSGALG00000012606 10342 iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]











Genes with expression patterns similar to ISCA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ISCA1 ENSGALG00000012606 10342 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
2. PDIA5 ENSGALG00000011689 6913 2.53 - - 0.819 - - - - 0.977 - 0.734 protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
3. RNF114 ENSGALG00000008021 6078 1.825 - - 0.826 - - - 0.999 - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
4. ING3 ENSGALG00000009023 4961 1.81 - - 0.811 - - - 0.999 - - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
5. SGCE ENSGALG00000009670 3070 1.797 - - 0.815 - - - - 0.982 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
6. RFC4 ENSGALG00000008703 5842 1.744 - - 0.813 - - - - 0.931 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
7. PTP4A1 ENSGALG00000016271 23953 1.731 - - 0.763 - - - - 0.968 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
8. PRKACB ENSGALG00000028530 12506 1.719 - - 0.724 - - - 0.995 - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
9. SHROOM2 ENSGALG00000030802 4517 1.716 - - 0.731 - - - - 0.985 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
10. MFF ENSGALG00000003079 5289 1.715 - - 0.730 - - - - 0.985 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
11. PASK ENSGALG00000006016 3096 1.711 - - - 0.712 - - 0.999 - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
12. SNRPD1 ENSGALG00000041334 219195 1.685 - - - - 0.716 - 0.969 - - - small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
13. CCNI ENSGALG00000011457 3203 1.655 - - 0.852 - - - - - - 0.803 cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
14. PPP1CC ENSGALG00000004571 14748 1.652 - - - - 0.727 - - 0.925 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
15. SQLE ENSGALG00000036915 4172 1.647 - - 0.859 - - - - - - 0.788 squalene epoxidase [Source:NCBI gene;Acc:420335]
16. CUL5 ENSGALG00000017165 2480 1.607 - - 0.835 - - - - - - 0.772 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
17. GTF2E1 ENSGALG00000042320 7712 1.58 - - 0.861 - 0.719 - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
18. DBN1 ENSGALG00000033405 216 1.552 - - 0.851 0.701 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
19. SNN ENSGALG00000028876 1687 1.547 - - 0.822 - - - - - - 0.725 stannin [Source:NCBI gene;Acc:416429]
20. MRPS33 ENSGALG00000028879 17966 1.535 - - 0.832 - 0.703 - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
21. DNAJC24 ENSGALG00000012130 1882 1.506 - - 0.801 - - - - - - 0.705 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
22. NUBP1 ENSGALG00000007241 3791 1.499 - - 0.772 - 0.727 - - - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
23. WDR12 ENSGALG00000008470 7654 1.495 - - 0.708 - - - - - - 0.787 WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
24. ACOX1 ENSGALG00000002159 2953 1.472 - - 0.754 - - - - - - 0.718 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
25. PRTG ENSGALG00000037336 34665 1.455 - - 0.704 - - - - - - 0.751 protogenin [Source:NCBI gene;Acc:415407]
26. OVCA2 ENSGALG00000045371 2862 1.455 - - 0.750 0.705 - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
27. TRAPPC12 ENSGALG00000016387 2593 1.448 - - - 0.728 - - - - - 0.720 trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
28. TCN2 3959 1.422 - - 0.704 - - - - - - 0.718 transcobalamin 2
29. ENSGALG00000003150 ENSGALG00000003150 10001 1 - - - - - - 1.000 - - -
30. RAB14 ENSGALG00000001474 12617 1 - - - - - - 1.000 - - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
31. IL17RD ENSGALG00000005499 5844 0.999 - - - - - - 0.999 - - - interleukin 17 receptor D [Source:NCBI gene;Acc:395186]
32. SULF1 ENSGALG00000039553 5115 0.999 - - - - - - 0.999 - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
33. POLDIP3 ENSGALG00000011863 6424 0.999 - - - - - - 0.999 - - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
34. TTLL5 ENSGALG00000010340 4875 0.999 - - - - - - 0.999 - - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
35. NEDD4L ENSGALG00000034584 5881 0.999 - - - - - - 0.999 - - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
36. ARHGEF28 ENSGALG00000014923 2523 0.999 - - - - - - 0.999 - - - Rho guanine nucleotide exchange factor 28 [Source:HGNC Symbol;Acc:HGNC:30322]
37. PSMD9 ENSGALG00000004352 7284 0.999 - - - - - - 0.999 - - - proteasome 26S subunit, non-ATPase 9 [Source:NCBI gene;Acc:416853]
38. SNX24 ENSGALG00000018874 4482 0.999 - - - - - - 0.999 - - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
39. ERP29 ENSGALG00000023510 47100 0.999 - - - - - - 0.999 - - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
40. WNT7B ENSGALG00000036255 3343 0.999 - - - - - - 0.999 - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
41. PTGR2 ENSGALG00000009269 4991 0.999 - - - - - - 0.999 - - - prostaglandin reductase 2 [Source:NCBI gene;Acc:423244]
42. VPS39 ENSGALG00000008991 4018 0.999 - - - - - - 0.999 - - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
43. CCNY ENSGALG00000007076 3921 0.999 - - - - - - 0.999 - - - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
44. GNA13 ENSGALG00000036028 9791 0.999 - - - - - - 0.999 - - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
45. DGKD ENSGALG00000001730 4456 0.999 - - - - - - 0.999 - - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
46. MMP2 ENSGALG00000003580 13120 0.998 - - - - - - 0.998 - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
47. PRRC1 ENSGALG00000014703 9962 0.998 - - - - - - 0.998 - - - proline rich coiled-coil 1 [Source:NCBI gene;Acc:427127]
48. NT5DC2 ENSGALG00000035596 27633 0.998 - - - - - - 0.998 - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
49. KIF4A ENSGALG00000004195 25487 0.998 - - - - - - 0.998 - - - kinesin family member 4A [Source:NCBI gene;Acc:395823]
50. NUP93 ENSGALG00000003010 16504 0.996 - - - - - - 0.996 - - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
51. WDFY3 10775 0.996 - - - - - - 0.996 - - - WD repeat and FYVE domain containing 3, transcript variant X7
52. Sep-02_1 Sep-02_1 19203 0.995 - - - - - - 0.995 - - -
53. RPB6 RPB6 9517 0.989 - - - - - - - 0.989 - -
54. MYL12A ENSGALG00000014854 63033 0.988 - - - - - - 0.988 - - - myosin, light chain 12A, regulatory, non-sarcomeric [Source:NCBI gene;Acc:396284]
55. RAB24 ENSGALG00000002984 6264 0.987 - - - - - - - 0.987 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
56. CAPZA1 ENSGALG00000001547 24242 0.986 - - - - - - - 0.986 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
57. NOVA1 ENSGALG00000009850 7584 0.986 - - - - - - - 0.986 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
58. HHIP ENSGALG00000009948 1536 0.985 - - - - - - - 0.985 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
59. LGMN ENSGALG00000010811 7401 0.985 - - - - - - - 0.985 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
60. OTUD4 ENSGALG00000009968 3919 0.984 - - - - - - - 0.984 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
61. MRPS31 ENSGALG00000017033 9287 0.983 - - - - - - - 0.983 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
62. CCDC167 ENSGALG00000010151 3567 0.983 - - - - - - - 0.983 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
63. KPNA1 ENSGALG00000014426 2724 0.983 - - - - - - - 0.983 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
64. ENSGALG00000022570 ENSGALG00000022570 90374 0.983 - - - - - - 0.983 - - -
65. MRPS7 ENSGALG00000007999 5445 0.982 - - - - - - - 0.982 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
66. KCNK5 ENSGALG00000034077 3233 0.982 - - - - - - - 0.982 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
67. WDR91 ENSGALG00000011724 5787 0.982 - - - - - - - 0.982 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
68. GNG10 ENSGALG00000015683 6905 0.982 - - - - - - - 0.982 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
69. LYRM4 ENSGALG00000027339 2917 0.982 - - - - - - - 0.982 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
70. CEP192 ENSGALG00000035625 2270 0.982 - - - - - - - 0.982 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
71. CYB5B ENSGALG00000000660 9733 0.981 - - - - - - - 0.981 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
72. PM20D1 ENSGALG00000000724 2108 0.981 - - - - - - - 0.981 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
73. POLR3H ENSGALG00000011947 2899 0.98 - - - - - - - 0.980 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
74. EPM2A ENSGALG00000012275 872 0.98 - - - - - - - 0.980 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
75. TNFRSF11B ENSGALG00000043167 911 0.98 - - - - - - - 0.980 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
76. BMP5 ENSGALG00000016293 2119 0.98 - - - - - - - 0.980 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
77. GOT2 ENSGALG00000002321 4961 0.979 - - - - - - - 0.979 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
78. ARFGAP3 ENSGALG00000014140 4612 0.979 - - - - - - - 0.979 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
79. UPF3B ENSGALG00000008618 12350 0.979 - - - - - - - 0.979 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
80. TCTEX1D2 ENSGALG00000027722 2201 0.979 - - - - - - - 0.979 - - Tctex1 domain containing 2
81. PRKAR2A ENSGALG00000007023 909 0.979 - - - - - - - 0.979 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
82. C26H6ORF106 C26H6ORF106 2168 0.979 - - - - - - - 0.979 - -
83. ENSGALG00000002595 ENSGALG00000002595 32163 0.978 - - - - - - - 0.978 - -
84. TNPO3 ENSGALG00000039420 5178 0.978 - - - - - - - 0.978 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
85. FAM136A ENSGALG00000042163 39487 0.978 - - - - - - - 0.978 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
86. CLIP1 ENSGALG00000004467 1058 0.978 - - - - - - - 0.978 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
87. COL14A1 ENSGALG00000037675 2652 0.978 - - - - - - - 0.978 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
88. TLE3 ENSGALG00000008120 2655 0.977 - - - - - - - 0.977 - - transducin like enhancer of split 3, transcript variant X10
89. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.977 - - - - - - - 0.977 - -
90. B9D1 ENSGALG00000005096 760 0.977 - - - - - - - 0.977 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
91. EEFSEC ENSGALG00000038684 298 0.976 - - - - - - - 0.976 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
92. ELMO2 ENSGALG00000007246 4569 0.975 - - - - - - - 0.975 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
93. NMD3 ENSGALG00000009533 8726 0.974 - - - - - - - 0.974 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
94. BRMS1L ENSGALG00000010093 4964 0.974 - - - - - - - 0.974 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
95. ARID4A ENSGALG00000012037 8554 0.974 - - - - - - - 0.974 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
96. SLC25A14 ENSGALG00000004063 5574 0.973 - - - - - - - 0.973 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
97. CNOT6 ENSGALG00000034316 10496 0.972 - - - - - - - 0.972 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
98. ATPAF1 ENSGALG00000010444 3677 0.971 - - - - - - - 0.971 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
99. CAT ENSGALG00000030187 7534 0.971 - - - - - - - 0.971 - - catalase [Source:NCBI gene;Acc:423600]
100. TRMT10A ENSGALG00000012264 2467 0.971 - - - - - - - 0.971 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]

There are 639 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA