Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for IRX5

Gene Name Gene ID Reads Annotation
IRX5 ENSGALG00000003588 79 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]











Genes with expression patterns similar to IRX5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IRX5 ENSGALG00000003588 79 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
2. FMNL2 ENSGALG00000012525 78 1.46 - - - - - 0.744 - 0.716 - - formin like 2 [Source:HGNC Symbol;Acc:HGNC:18267]
3. ASXL1 ENSGALG00000006612 273 0.924 - - - - - 0.924 - - - - ASXL transcriptional regulator 1 [Source:HGNC Symbol;Acc:HGNC:18318]
4. GABPB2 ENSGALG00000026734 7 0.921 - - - - - 0.921 - - - - GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]
5. ENSGALG00000027815 ENSGALG00000027815 15 0.898 - - - - - 0.898 - - - -
6. CDXB CDXB 143 0.898 - - - - - 0.898 - - - -
7. LMO3 ENSGALG00000036358 1 0.898 - - - - - 0.898 - - - - LIM domain only 3 [Source:HGNC Symbol;Acc:HGNC:6643]
8. SLC6A11 ENSGALG00000004879 16 0.898 - - - - - 0.898 - - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
9. RHPN1 ENSGALG00000034337 3 0.898 - - - - - 0.898 - - - - rhophilin Rho GTPase binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19973]
10. CDH20 ENSGALG00000012906 2 0.898 - - - - - 0.898 - - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
11. TPPP3 ENSGALG00000002103 1 0.898 - - - - - 0.898 - - - - tubulin polymerization promoting protein family member 3 [Source:HGNC Symbol;Acc:HGNC:24162]
12. ERN1 ENSGALG00000003476 4 0.898 - - - - - 0.898 - - - - endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene;Acc:417414]
13. ENSGALG00000028322 ENSGALG00000028322 19 0.898 - - - - - 0.898 - - - -
14. LRP3 ENSGALG00000004853 13 0.898 - - - - - 0.898 - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
15. MLH1 ENSGALG00000039169 19 0.898 - - - - - 0.898 - - - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
16. ENSGALG00000025714 ENSGALG00000025714 6 0.898 - - - - - 0.898 - - - -
17. BPIFC BPIFC 1 0.898 - - - - - 0.898 - - - -
18. ENSGALG00000028571 ENSGALG00000028571 1 0.898 - - - - - 0.898 - - - -
19. ENSGALG00000019221 ENSGALG00000019221 9 0.898 - - - - - 0.898 - - - -
20. PSCA ENSGALG00000045875 5 0.898 - - - - - 0.898 - - - - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
21. MYNN ENSGALG00000009409 11 0.898 - - - - - 0.898 - - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
22. IPP ENSGALG00000010287 2 0.898 - - - - - 0.898 - - - - intracisternal A particle-promoted polypeptide [Source:HGNC Symbol;Acc:HGNC:6108]
23. GIF ENSGALG00000031546 2 0.898 - - - - - 0.898 - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
24. MYO18B ENSGALG00000045218 7 0.898 - - - - - 0.898 - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
25. C9orf171 C9orf171 35 0.898 - - - - - 0.898 - - - -
26. GZF1_1 ENSGALG00000008350 92 0.897 - - - - - 0.897 - - - - GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]
27. SPOCK2 9 0.892 - - - - - 0.892 - - - - SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2, transcript variant X2
28. PARD6A ENSGALG00000001214 9 0.889 - - - - - 0.889 - - - - par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]
29. ST3GAL4 ENSGALG00000029747 184 0.888 - - - - - 0.888 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10864]
30. LOC769139 ENSGALG00000026754 753 0.886 - - - - - 0.886 - - - - feather keratin 1-like, transcript variant X2
31. PDE9A ENSGALG00000016186 116 0.871 - - - - - - - 0.871 - - phosphodiesterase 9A [Source:HGNC Symbol;Acc:HGNC:8795]
32. CDC14B ENSGALG00000012627 110 0.86 - - - - - - - 0.860 - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
33. ENSGALG00000007420 ENSGALG00000007420 7 0.856 - - - - - 0.856 - - - -
34. FAR1 ENSGALG00000005353 12 0.856 - - - - - 0.856 - - - - fatty acyl-CoA reductase 1 [Source:NCBI gene;Acc:423028]
35. CCDC92 ENSGALG00000003146 40 0.853 - - - - - 0.853 - - - - coiled-coil domain containing 92 [Source:HGNC Symbol;Acc:HGNC:29563]
36. FBXO18 35 0.847 - - - - - 0.847 - - - - F-box protein, helicase, 18, transcript variant X4
37. GAREML GAREML 8 0.847 - - - - - 0.847 - - - -
38. TMEM132B ENSGALG00000002742 122 0.847 - - - - - 0.847 - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
39. SOX2 ENSGALG00000043460 6 0.845 - - - - - 0.845 - - - - SRY-box 2 [Source:NCBI gene;Acc:396105]
40. TMEM52B ENSGALG00000034698 169 0.844 - - - - - 0.844 - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
41. DOK6 ENSGALG00000013753 2 0.834 - - - - - 0.834 - - - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
42. ECEL1 ENSGALG00000030420 670 0.832 - - - - - 0.832 - - - - endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
43. CARD8 ENSGALG00000007698 45 0.831 - - - - - 0.831 - - - - caspase recruitment domain family, member 8
44. RASL11A ENSGALG00000017099 379 0.831 - - - - - 0.831 - - - - RAS like family 11 member A [Source:HGNC Symbol;Acc:HGNC:23802]
45. UBXN6 ENSGALG00000001146 122 0.824 - - - - - 0.824 - - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
46. LOC101750367 ENSGALG00000006693 5 0.82 - - - - - - - 0.820 - - BPI fold-containing family B member 4-like, transcript variant X3
47. CFAP74 ENSGALG00000001288 54 0.82 - - - - - - - 0.820 - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
48. BRINP2 ENSGALG00000004448 26 0.82 - - - - - 0.820 - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
49. ABCB5 ENSGALG00000010901 60 0.817 - - - - - 0.817 - - - - ATP binding cassette subfamily B member 5, transcript variant X1
50. ENSGALG00000027602 ENSGALG00000027602 20 0.813 - - - - - 0.813 - - - -
51. SLC35G1 ENSGALG00000041456 349 0.804 - - - - - 0.804 - - - - solute carrier family 35 member G1 [Source:HGNC Symbol;Acc:HGNC:26607]
52. GDPD1 ENSGALG00000005103 91 0.782 - - - - - 0.782 - - - - glycerophosphodiester phosphodiesterase domain containing 1 [Source:NCBI gene;Acc:417631]
53. AIG1 ENSGALG00000013780 27 0.781 - - - - - 0.781 - - - - androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:21607]
54. NPAS2 ENSGALG00000016774 48 0.777 - - - - - - - 0.777 - - neuronal PAS domain protein 2 [Source:NCBI gene;Acc:395433]
55. APBB1IP ENSGALG00000007579 30 0.776 - - - - - - - 0.776 - - amyloid beta precursor protein binding family B member 1 interacting protein [Source:NCBI gene;Acc:420492]
56. SV2C ENSGALG00000014967 7 0.776 - - - - - 0.776 - - - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
57. FAM190B FAM190B 165 0.776 - - - - - - - 0.776 - -
58. PLAG1 ENSGALG00000015407 17 0.776 - - - - - - - 0.776 - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
59. CBFA2T2 ENSGALG00000003096 61 0.774 - - - - - 0.774 - - - - CBFA2/RUNX1 translocation partner 2 [Source:NCBI gene;Acc:419155]
60. ENSGALG00000027927 ENSGALG00000027927 654 0.771 - - - - - 0.771 - - - -
61. ENSGALG00000023852 ENSGALG00000023852 31 0.768 - - - - - 0.768 - - - -
62. TCAIM ENSGALG00000011498 30 0.765 - - - - - 0.765 - - - - T-cell activation inhibitor, mitochondrial [Source:NCBI gene;Acc:420670]
63. TADA2B ENSGALG00000015547 55 0.764 - - - - - 0.764 - - - - transcriptional adaptor 2B [Source:HGNC Symbol;Acc:HGNC:30781]
64. CADM3 ENSGALG00000036925 1753 0.761 - - - - - - - 0.761 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
65. MEIG1 ENSGALG00000000451 12 0.76 - - - - - 0.760 - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
66. D1A D1A 1026 0.76 - - 0.760 - - - - - - -
67. NKAIN3 NKAIN3 802 0.759 - - - - - 0.759 - - - -
68. RPGR ENSGALG00000036284 186 0.757 - - - - - - - 0.757 - - retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
69. TJAP1 ENSGALG00000010385 4 0.754 - - - - - 0.754 - - - - tight junction associated protein 1, transcript variant X1
70. ADCYAP1R1 ENSGALG00000005223 114 0.754 - - - - - 0.754 - - - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
71. MMD2 ENSGALG00000004530 167 0.753 - - - - - 0.753 - - - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
72. PTGS2 ENSGALG00000033635 426 0.753 - - - - - 0.753 - - - - prostaglandin-endoperoxide synthase 2 [Source:NCBI gene;Acc:396451]
73. CLN5 ENSGALG00000016917 386 0.75 - - - - - 0.750 - - - - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
74. GABBR2 ENSGALG00000013200 176 0.749 - - - - - 0.749 - - - - gamma-aminobutyric acid type B receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:4507]
75. POPDC2 ENSGALG00000014988 281 0.747 - - - - - 0.747 - - - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
76. CELSR3 ENSGALG00000036763 4 0.743 - - - - - 0.743 - - - - cadherin EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:HGNC:3230]
77. C8orf22 C8orf22 37 0.74 - - - - - - - 0.740 - -
78. FZD10 ENSGALG00000042003 11 0.739 - - - - - 0.739 - - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
79. MLXIP ENSGALG00000004397 125 0.739 - - - - - 0.739 - - - - MLX interacting protein [Source:HGNC Symbol;Acc:HGNC:17055]
80. TSC22D3 ENSGALG00000027069 1222 0.738 - - - - - 0.738 - - - - TSC22 domain family member 3 [Source:NCBI gene;Acc:768091]
81. FUT13 FUT13 49 0.737 - - - - - 0.737 - - - -
82. PLCL2 ENSGALG00000011248 162 0.732 - - - - - 0.732 - - - - phospholipase C like 2 [Source:HGNC Symbol;Acc:HGNC:9064]
83. NSL1/DC31 NSL1/DC31 43 0.73 - - - - - - 0.730 - - -
84. ADIPOR1 ENSGALG00000000094 1862 0.729 - - - - - 0.729 - - - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
85. LRRC8C ENSGALG00000006170 43 0.722 - - - - - 0.722 - - - - leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
86. CMTM3 ENSGALG00000000424 393 0.721 - - - - - 0.721 - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
87. TMEM173 ENSGALG00000041129 93 0.719 - - - - - 0.719 - - - - transmembrane protein 173 [Source:NCBI gene;Acc:768990]
88. CXorf57 ENSGALG00000008990 31 0.719 - - - - - 0.719 - - - - chromosome X open reading frame 57 [Source:HGNC Symbol;Acc:HGNC:25486]
89. ENSGALG00000001346 ENSGALG00000001346 233 0.716 - - - - - 0.716 - - - -
90. ELMO2 ENSGALG00000007246 4569 0.716 - - - - - 0.716 - - - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
91. TRPC1 ENSGALG00000002639 296 0.716 - - - - - 0.716 - - - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
92. H2B-V H2B-V 24 0.715 - - - - - 0.715 - - - -
93. FAM181B ENSGALG00000046082 298 0.709 - - - - - 0.709 - - - - family with sequence similarity 181 member B [Source:HGNC Symbol;Acc:HGNC:28512]
94. CCNO ENSGALG00000028595 68 0.707 - - - - - 0.707 - - - - cyclin O [Source:HGNC Symbol;Acc:HGNC:18576]
95. gga-mir-10b ENSGALG00000018331 147 0.707 - - - - - - - - - 0.707 gga-mir-10b [Source:miRBase;Acc:MI0001216]
96. TLR4 ENSGALG00000007001 116 0.707 - - - 0.707 - - - - - - toll like receptor 4 [Source:NCBI gene;Acc:417241]
97. TAT ENSGALG00000000893 11 0.704 - - - - - - - 0.704 - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
98. HOXA2 ENSGALG00000040521 1054 0.703 - - - - - 0.703 - - - - homeobox A2 [Source:NCBI gene;Acc:396055]
99. GAP43 ENSGALG00000015089 505 0.702 - - - - - - - 0.702 - - growth associated protein 43 [Source:NCBI gene;Acc:427955]
100. TRAF2 ENSGALG00000042838 24 0.702 - - - - - - - 0.702 - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]

There are 1 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA