Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IRX2

Gene Name Gene ID Reads Annotation
IRX2 ENSGALG00000013193 2170 iroquois homeobox 2 [Source:NCBI gene;Acc:373975]











Genes with expression patterns similar to IRX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IRX2 ENSGALG00000013193 2170 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
2. RBM38 ENSGALG00000026081 7115 1.714 - - - - - 0.714 1.000 - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
3. MTRR ENSGALG00000039424 3197 1 - - - - - - 1.000 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
4. PPP2R3B ENSGALG00000016702 1538 1 - - - - - - 1.000 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
5. D1A D1A 1026 1 - - - - - - 1.000 - - -
6. NAE1 ENSGALG00000038957 13777 1 - - - - - - 1.000 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
7. GRSF1 2406 1 - - - - - - 1.000 - - - G-rich RNA sequence binding factor 1, transcript variant X2
8. SEC62 ENSGALG00000009379 15745 0.999 - - - - - - 0.999 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
9. ELP3 ENSGALG00000016624 4483 0.999 - - - - - - 0.999 - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
10. C5orf22 ENSGALG00000012909 3537 0.999 - - - - - - 0.999 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
11. SUPT4H1 ENSGALG00000000944 8675 0.999 - - - - - - 0.999 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
12. HINT3 ENSGALG00000044342 5674 0.999 - - - - - - 0.999 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
13. ARL14EP ENSGALG00000012139 4690 0.999 - - - - - - 0.999 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
14. PSIP1 ENSGALG00000015105 8322 0.999 - - - - - - 0.999 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
15. MAP3K4 ENSGALG00000020003 6378 0.999 - - - - - - 0.999 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
16. ZWILCH ENSGALG00000007736 4939 0.998 - - - - - - 0.998 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
17. EPCAM ENSGALG00000008969 10014 0.998 - - - - - - 0.998 - - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
18. ISY1 ENSGALG00000005012 7477 0.998 - - - - - - 0.998 - - - ISY1 splicing factor homolog
19. FAM72A ENSGALG00000000791 17723 0.997 - - - - - - 0.997 - - - family with sequence similarity 72 member A, transcript variant X1
20. PTRHD1 ENSGALG00000016610 3636 0.993 - - - - - - 0.993 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
21. UBLCP1 ENSGALG00000003672 9332 0.993 - - - - - - 0.993 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
22. ARMC1 ENSGALG00000036567 5476 0.993 - - - - - - 0.993 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
23. PDAP1 ENSGALG00000036552 28881 0.992 - - - - - - 0.992 - - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
24. ZFP91 ENSGALG00000007287 13681 0.991 - - - - - - 0.991 - - - ZFP91 zinc finger protein
25. BMP7 ENSGALG00000007668 6645 0.991 - - - - - - 0.991 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
26. COX7B ENSGALG00000007863 59194 0.982 - - - - - - 0.982 - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
27. POLR2L ENSGALG00000006841 33915 0.981 - - - - - - 0.981 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
28. RBM5 30998 0.98 - - - - - - 0.980 - - - RNA binding motif protein 5, transcript variant X1
29. GDI2 ENSGALG00000008169 67151 0.98 - - - - - - 0.980 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
30. EIF3E ENSGALG00000037067 36561 0.976 - - - - - - 0.976 - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
31. HSPD1 ENSGALG00000008094 40870 0.975 - - - - - - 0.975 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
32. CDC42SE1 ENSGALG00000028119 14813 0.956 - - - - - - 0.956 - - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
33. CAPZB ENSGALG00000004034 19630 0.956 - - - - - - 0.956 - - - capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
34. TYMS ENSGALG00000014897 20484 0.94 - - - - - - 0.940 - - - thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
35. MLF2 ENSGALG00000014468 45953 0.934 - - - - - - 0.934 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
36. PNRC1 ENSGALG00000015780 75894 0.931 - - - - - - 0.931 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
37. HES6 ENSGALG00000028415 4830 0.925 - - - - - 0.925 - - - - hes family bHLH transcription factor 6
38. HSP90B1 ENSGALG00000033789 58910 0.92 - - - - - - 0.920 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
39. FGFR3 ENSGALG00000015708 16853 0.918 - - - - - 0.918 - - - - fibroblast growth factor receptor 3 [Source:NCBI gene;Acc:396515]
40. RPL27A ENSGALG00000005948 363481 0.912 - - - - - - 0.912 - - - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
41. PAX-6 PAX-6 2650 0.909 - - - - - 0.909 - - - -
42. ENPP2 ENSGALG00000032746 6086 0.909 - - - - - 0.909 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
43. ENSGALG00000027373 ENSGALG00000027373 2129 0.894 - - - - - 0.894 - - - -
44. HES5 ENSGALG00000001141 6514 0.89 - - - - - 0.890 - - - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
45. TAX1BP3 ENSGALG00000004618 35172 0.882 - - - - - - 0.882 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
46. OPTC ENSGALG00000003554 3698 0.876 - - - - - 0.876 - - - - opticin [Source:NCBI gene;Acc:395130]
47. SOX10 ENSGALG00000012290 3942 0.874 - - - - - 0.874 - - - - SRY-box 10 [Source:NCBI gene;Acc:395573]
48. LASP-2 LASP-2 4415 0.87 - - - - - 0.870 - - - -
49. EIF3F ENSGALG00000005326 76059 0.864 - - - - - - 0.864 - - - eukaryotic translation initiation factor 3 subunit F
50. PTPRZ1 ENSGALG00000040114 3410 0.863 - - - - - 0.863 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
51. FKBP25 FKBP25 38434 0.858 - - - - - - 0.858 - - -
52. CRABP-I ENSGALG00000003193 67258 0.845 - - - - - 0.845 - - - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
53. CERCAM ENSGALG00000004986 5158 0.839 - - - - - 0.839 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
54. ENSGALG00000027002 ENSGALG00000027002 7570 0.822 - - - - - 0.822 - - - -
55. CNTN2 ENSGALG00000000653 219 0.816 - - - - - 0.816 - - - - contactin 2 [Source:NCBI gene;Acc:419825]
56. CKB ENSGALG00000011511 2100 0.814 - - - - - 0.814 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
57. PROCA1 668 0.809 - - - - - 0.809 - - - - protein interacting with cyclin A1
58. NEFM ENSGALG00000000317 6992 0.807 - - - - - 0.807 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]
59. TFAP2A ENSGALG00000012775 294 0.806 - - - - - 0.806 - - - - transcription factor AP-2 alpha [Source:NCBI gene;Acc:395982]
60. TTLL2 ENSGALG00000011344 14 0.804 - - - - - - - - - 0.804 tubulin tyrosine ligase like 2, transcript variant X1
61. DLX5 ENSGALG00000009129 1395 0.803 - - - - - - - 0.803 - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
62. MARCKSL1 ENSGALG00000032335 88728 0.801 - - - - - 0.801 - - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
63. GHOX-7 GHOX-7 2555 0.797 - - - - - - - 0.797 - -
64. SLC35F1 ENSGALG00000029011 14728 0.791 - - - - - 0.791 - - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
65. NMD3 ENSGALG00000009533 8726 0.79 - - - - - - 0.790 - - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
66. LDHB ENSGALG00000035836 169726 0.787 - - - - - 0.787 - - - - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
67. IRX1 ENSGALG00000030991 1474 0.783 - - - - - 0.783 - - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
68. SRGAP3 ENSGALG00000008378 4331 0.783 - - - - - 0.783 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
69. ENSGALG00000027927 ENSGALG00000027927 654 0.783 - - 0.783 - - - - - - -
70. LGR5 ENSGALG00000010163 2931 0.783 - - - - - 0.783 - - - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
71. ACVR2B ENSGALG00000006158 8692 0.779 - - - - - 0.779 - - - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
72. DNAAF2 ENSGALG00000012232 34 0.776 - - - - - - - - - 0.776 dynein axonemal assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:20188]
73. DBX1 ENSGALG00000003965 1432 0.773 - - - - - 0.773 - - - - developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
74. WNT6 ENSGALG00000011358 1886 0.769 - - - - - - - 0.769 - - Wnt family member 6 [Source:NCBI gene;Acc:395235]
75. BRSK2 ENSGALG00000006681 158 0.769 - - - - - 0.769 - - - - BR serine/threonine kinase 2 [Source:NCBI gene;Acc:423098]
76. LIPG ENSGALG00000043734 2490 0.768 - - - - - 0.768 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
77. NPPA ENSGALG00000004574 226 0.767 - - - - - - - 0.767 - - natriuretic peptide A [Source:NCBI gene;Acc:395765]
78. TSPAN3 ENSGALG00000002774 28811 0.766 - - - - - 0.766 - - - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
79. PRTG ENSGALG00000037336 34665 0.765 - - - - - 0.765 - - - - protogenin [Source:NCBI gene;Acc:415407]
80. DLL1 ENSGALG00000011182 1613 0.763 - - - - - 0.763 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
81. CDH10 ENSGALG00000032022 37 0.758 - - - - - - - - - 0.758 cadherin 10 [Source:NCBI gene;Acc:408049]
82. KLHL40 ENSGALG00000005292 61 0.755 - - - - - - - - - 0.755 kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
83. MYL2 ENSGALG00000004582 2245 0.753 - 0.753 - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
84. LOC408038 ENSGALG00000024136 33 0.752 - - - - - - - 0.752 - - beta-keratin
85. MYL4 ENSGALG00000000585 16982 0.75 - - - - - 0.750 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
86. SPINK7 SPINK7 254 0.748 - - - - - - - 0.748 - -
87. ENO1 ENSGALG00000002377 251226 0.747 - - - - - 0.747 - - - - enolase 1, (alpha) [Source:NCBI gene;Acc:396017]
88. RGMA ENSGALG00000039173 12874 0.745 - - - - - 0.745 - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
89. GNG10 ENSGALG00000015683 6905 0.744 - - - - - 0.744 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
90. FAM171B ENSGALG00000002646 837 0.742 - - - - - 0.742 - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
91. ZBTB16 ENSGALG00000038540 5544 0.739 - - - - - 0.739 - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
92. HOXD4 ENSGALG00000023419 6073 0.738 - - - - - 0.738 - - - - homeobox D4 [Source:NCBI gene;Acc:424139]
93. COL14A1 ENSGALG00000037675 2652 0.737 - - - - - 0.737 - - - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
94. TUBB2C TUBB2C 44249 0.737 - - - - - 0.737 - - - -
95. VHL ENSGALG00000028009 25009 0.737 - - - - - - 0.737 - - - von Hippel-Lindau tumor suppressor, transcript variant X1
96. WRAP73 ENSGALG00000001017 430 0.736 - - - - - - - 0.736 - - WD repeat containing, antisense to TP73 [Source:NCBI gene;Acc:419383]
97. ENSGALG00000013357 ENSGALG00000013357 2282 0.735 - - - - - 0.735 - - - -
98. PAX3 ENSGALG00000030944 2987 0.735 - - - - - 0.735 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
99. PAX-7 PAX-7 3856 0.734 - - - - - 0.734 - - - -
100. ASTN2 ENSGALG00000007038 1748 0.733 - - - - - 0.733 - - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA