Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IRF6

Gene Name Gene ID Reads Annotation
IRF6 ENSGALG00000001405 3144 interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]











Genes with expression patterns similar to IRF6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IRF6 ENSGALG00000001405 3144 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 interferon regulatory factor 6 [Source:HGNC Symbol;Acc:HGNC:6121]
2. TOPBP1 ENSGALG00000034461 3094 1.783 - - - - - - 0.998 0.785 - - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
3. CYP20A1 ENSGALG00000008730 930 1.712 - - - 0.907 - - - 0.805 - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
4. AKT1 ENSGALG00000011620 4089 1.694 - - - 0.885 - - - 0.809 - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
5. ZNF335 ENSGALG00000041370 4740 1.66 - - - 0.831 - - - 0.829 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
6. GAS2L3 ENSGALG00000028373 1452 1.624 - - - 0.856 - - - 0.768 - - growth arrest specific 2 like 3 [Source:NCBI gene;Acc:417931]
7. MCCC2L ENSGALG00000011255 889 1.621 - - - 0.905 - - - 0.716 - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
8. NR6A1 ENSGALG00000001073 2071 1.597 - - - 0.872 - - - 0.725 - - nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]
9. DPY30 ENSGALG00000010621 6818 1.594 - - - 0.888 - - - 0.706 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
10. CCDC47 ENSGALG00000000564 6584 1.422 - - - 0.716 - - - 0.706 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
11. RCN2 ENSGALG00000039284 17848 1.405 - - - 0.701 - - - 0.704 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
12. RBM45 ENSGALG00000009202 6057 0.999 - - - - - - 0.999 - - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
13. IGDCC3 ENSGALG00000007371 2434 0.999 - - - - - - 0.999 - - - immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
14. CKAP2 ENSGALG00000017025 25020 0.999 - - - - - - 0.999 - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
15. GATAD2A ENSGALG00000042900 6337 0.999 - - - - - - 0.999 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
16. GALT ENSGALG00000026195 2002 0.999 - - - - - - 0.999 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
17. UGCG ENSGALG00000015682 2735 0.999 - - - - - - 0.999 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
18. THOC5 ENSGALG00000029223 16069 0.999 - - - - - - 0.999 - - - THO complex 5 [Source:NCBI gene;Acc:417019]
19. YWHAE ENSGALG00000002661 37143 0.998 - - - - - - 0.998 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
20. CHKA ENSGALG00000036754 5077 0.998 - - - - - - 0.998 - - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
21. RALBP1 ENSGALG00000008405 13780 0.998 - - - - - - 0.998 - - - ralA binding protein 1 [Source:NCBI gene;Acc:429466]
22. SMPD3 ENSGALG00000034950 4335 0.998 - - - - - - 0.998 - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
23. APP ENSGALG00000015770 9438 0.998 - - - - - - 0.998 - - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
24. DEPDC1B ENSGALG00000014729 5334 0.998 - - - - - - 0.998 - - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
25. RBM18 ENSGALG00000028167 10372 0.998 - - - - - - 0.998 - - - RNA binding motif protein 18 [Source:HGNC Symbol;Acc:HGNC:28413]
26. HSD17B12 ENSGALG00000036787 11748 0.998 - - - - - - 0.998 - - - hydroxysteroid 17-beta dehydrogenase 12 [Source:HGNC Symbol;Acc:HGNC:18646]
27. SLBP ENSGALG00000015712 5586 0.998 - - - - - - 0.998 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
28. DDX1 ENSGALG00000016461 15157 0.997 - - - - - - 0.997 - - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
29. UTP15 ENSGALG00000013510 13122 0.996 - - - - - - 0.996 - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
30. DDOST ENSGALG00000010073 18707 0.996 - - - - - - 0.996 - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
31. PLOD2 ENSGALG00000006783 22789 0.996 - - - - - - 0.996 - - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
32. C1D ENSGALG00000008765 14779 0.995 - - - - - - 0.995 - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
33. C28H19ORF10 C28H19ORF10 16529 0.995 - - - - - - 0.995 - - -
34. HECTD3 ENSGALG00000010217 2513 0.993 - - - - - - 0.993 - - - HECT domain E3 ubiquitin protein ligase 3, transcript variant X2
35. LSM7 ENSGALG00000000408 19112 0.991 - - - - - - 0.991 - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
36. BZW2 ENSGALG00000010809 29213 0.984 - - - - - - 0.984 - - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
37. NUDCD2 ENSGALG00000001726 6303 0.977 - - - - - - 0.977 - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
38. NDUFA10 ENSGALG00000004302 41948 0.973 - - - - - - 0.973 - - - NADH:ubiquinone oxidoreductase subunit A10 [Source:NCBI gene;Acc:424032]
39. ASNS ENSGALG00000009748 11822 0.966 - - - - - - 0.966 - - - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
40. RNF7 ENSGALG00000021117 13110 0.953 - - - - - - 0.953 - - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
41. FRRS1 ENSGALG00000005418 332 0.945 - - - 0.945 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
42. ENSGALG00000027412 ENSGALG00000027412 202 0.943 - - - 0.943 - - - - - -
43. SUGT1 ENSGALG00000016946 22881 0.943 - - - - - - 0.943 - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
44. VWDE ENSGALG00000042443 160 0.943 - - - 0.943 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
45. ZBTB17 ENSGALG00000035352 280 0.941 - - - 0.941 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
46. KIF6 ENSGALG00000010057 84 0.94 - - - 0.940 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
47. MLH3 ENSGALG00000010304 231 0.94 - - - 0.940 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
48. DBN1 ENSGALG00000033405 216 0.938 - - - 0.938 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
49. TRIM62 ENSGALG00000028437 5124 0.935 - - - 0.935 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
50. GFPT2 ENSGALG00000039705 562 0.934 - - - 0.934 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
51. ITPKB ENSGALG00000009068 324 0.932 - - - 0.932 - - - - - - inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:HGNC:6179]
52. WDR96 WDR96 255 0.932 - - - 0.932 - - - - - -
53. RBFOX1 ENSGALG00000034325 2133 0.931 - - - 0.931 - - - - - - RNA binding fox-1 homolog 1 [Source:HGNC Symbol;Acc:HGNC:18222]
54. TBK1 ENSGALG00000009840 1650 0.931 - - - 0.931 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
55. CA3 CA3 200 0.929 - - - 0.929 - - - - - -
56. PASK ENSGALG00000006016 3096 0.925 - - - 0.925 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
57. SNORA31 SNORA31 183 0.923 - - - 0.923 - - - - - -
58. GUF1 ENSGALG00000014217 211 0.923 - - - 0.923 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
59. IFT43 ENSGALG00000020415 1218 0.922 - - - 0.922 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
60. KIAA1432 KIAA1432 1792 0.922 - - - 0.922 - - - - - -
61. ADCY9 ENSGALG00000007779 766 0.921 - - - 0.921 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
62. RNPC3 ENSGALG00000005162 269 0.92 - - - 0.920 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
63. IDH1 ENSGALG00000008818 17613 0.92 - - - - - - 0.920 - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
64. SF3B6 ENSGALG00000016501 28236 0.92 - - - - - - 0.920 - - - splicing factor 3b subunit 6 [Source:HGNC Symbol;Acc:HGNC:30096]
65. ASRGL1 ENSGALG00000015949 403 0.919 - - - 0.919 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
66. MRPS30 ENSGALG00000014874 3416 0.918 - - - 0.918 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
67. GALNT12 ENSGALG00000013197 1330 0.916 - - - 0.916 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
68. NCOA3 ENSGALG00000004570 243 0.915 - - - 0.915 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
69. PRKD1 ENSGALG00000009900 2094 0.913 - - - 0.913 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
70. PANK1 ENSGALG00000006431 2910 0.909 - - - 0.909 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
71. NME6 ENSGALG00000038044 1231 0.909 - - - 0.909 - - - - - - NME/NM23 nucleoside diphosphate kinase 6
72. BTG1L ENSGALG00000004676 2293 0.907 - - - 0.907 - - - - - - protein BTG1-like
73. HPS5 ENSGALG00000027716 2466 0.907 - - - 0.907 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
74. ELMOD1 ENSGALG00000017169 2303 0.903 - - - 0.903 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
75. KIAA1462 1612 0.902 - - - 0.902 - - - - - - KIAA1462, transcript variant X4
76. TMOD1 ENSGALG00000002125 933 0.902 - - - 0.902 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
77. CDC42 ENSGALG00000004796 59878 0.901 - - - - - - 0.901 - - - cell division cycle 42 [Source:NCBI gene;Acc:395917]
78. HMHA1 HMHA1 929 0.9 - - - 0.900 - - - - - -
79. PRDM4 ENSGALG00000012619 876 0.9 - - - 0.900 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
80. C1orf21 ENSGALG00000020922 4035 0.899 - - - 0.899 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
81. VPS13B 2293 0.899 - - - 0.899 - - - - - - vacuolar protein sorting 13 homolog B
82. COPA ENSGALG00000009153 11618 0.898 - - - 0.898 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
83. FIGNL1 ENSGALG00000026363 2194 0.898 - - - 0.898 - - - - - - fidgetin like 1, transcript variant X2
84. CHM ENSGALG00000006906 4953 0.898 - - - 0.898 - - - - - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
85. DEPDC5 ENSGALG00000006766 1592 0.898 - - - 0.898 - - - - - - DEP domain containing 5, transcript variant X6
86. ASCC1 ENSGALG00000026019 3583 0.896 - - - 0.896 - - - - - - activating signal cointegrator 1 complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:24268]
87. DPP8 ENSGALG00000007437 1763 0.895 - - - 0.895 - - - - - - dipeptidyl peptidase 8 [Source:HGNC Symbol;Acc:HGNC:16490]
88. PDE4B ENSGALG00000011094 1871 0.895 - - - 0.895 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
89. UTP18 ENSGALG00000002985 7129 0.892 - - - 0.892 - - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
90. MOSPD1 ENSGALG00000006132 8503 0.892 - - - 0.892 - - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
91. NUDT4 ENSGALG00000011285 2998 0.892 - - - 0.892 - - - - - - nudix hydrolase 4, transcript variant X5
92. NECAB3 ENSGALG00000003065 417 0.891 - - - 0.891 - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
93. PPFIA1 ENSGALG00000035774 5258 0.89 - - - 0.890 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
94. KIAA1143 ENSGALG00000035952 6735 0.89 - - - 0.890 - - - - - - KIAA1143 [Source:NCBI gene;Acc:420709]
95. LRRCC1 ENSGALG00000039499 480 0.89 - - - 0.890 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
96. ITGA9 ENSGALG00000029378 415 0.89 - - - 0.890 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
97. TGS1 ENSGALG00000015340 5897 0.887 - - - 0.887 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
98. KIN ENSGALG00000030702 1608 0.887 - - - 0.887 - - - - - - Kin17 DNA and RNA binding protein [Source:HGNC Symbol;Acc:HGNC:6327]
99. SUMO1 ENSGALG00000008435 19847 0.883 - - - 0.883 - - - - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
100. C12orf45 C12orf45 2445 0.883 - - - 0.883 - - - - - -

There are 393 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA