Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IRF-4

Gene Name Gene ID Reads Annotation
IRF-4 IRF-4 19











Genes with expression patterns similar to IRF-4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IRF-4 IRF-4 19 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000
2. MCOLN3 ENSGALG00000008709 21 1.91 - - - - 0.910 - 1.000 - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
3. SMAD9 ENSGALG00000017050 11 1.749 - - - - - - 1.000 - - 0.749 SMAD family member 9 [Source:NCBI gene;Acc:395543]
4. RAB37 ENSGALG00000027789 17 1.731 - - 0.731 - - - 1.000 - - - RAB37, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:30268]
5. MKL2 186 1.654 - - - - 0.837 - - 0.817 - - MKL1/myocardin like 2, transcript variant X4
6. HOGA1 ENSGALG00000006134 25 1.65 - - 0.902 0.748 - - - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
7. NOV ENSGALG00000038364 190 1.598 - - - - - - - 0.760 - 0.838 nephroblastoma overexpressed [Source:NCBI gene;Acc:396204]
8. DNAJA2 ENSGALG00000004115 1670 1.542 - - - - 0.781 - - 0.761 - - DnaJ heat shock protein family (Hsp40) member A2 [Source:NCBI gene;Acc:415744]
9. LRRC58 ENSGALG00000033186 15 1 - - - - - - 1.000 - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]
10. CAPN9 158 1 - - - - - - 1.000 - - - calpain 9
11. PIRT 41 1 - - - - - - 1.000 - - - phosphoinositide-interacting regulator of transient receptor potential channels
12. CLRN1 ENSGALG00000010384 7 1 - - - - - - 1.000 - - - clarin 1 [Source:HGNC Symbol;Acc:HGNC:12605]
13. DMGDH ENSGALG00000004491 15 1 - - - - - - 1.000 - - - dimethylglycine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:24475]
14. CLCA2 8 1 - - 1.000 - - - - - - - chloride channel accessory 2, transcript variant X1
15. RAB11FIP1 41 1 - - - - - - 1.000 - - - RAB11 family interacting protein 1, transcript variant X2
16. CFI ENSGALG00000012126 20 1 - - - - - - 1.000 - - - complement factor I [Source:NCBI gene;Acc:428773]
17. MAPK15 ENSGALG00000029279 1 1 - - 1.000 - - - - - - - mitogen-activated protein kinase 15 [Source:HGNC Symbol;Acc:HGNC:24667]
18. CA13 ENSGALG00000033428 1 1 - - - - - - 1.000 - - - carbonic anhydrase 13 [Source:HGNC Symbol;Acc:HGNC:14914]
19. ZDHHC16 ENSGALG00000007592 19 1 - - - - - - 1.000 - - - zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
20. TELO2 ENSGALG00000009297 1 1 - - 1.000 - - - - - - - telomere maintenance 2 [Source:HGNC Symbol;Acc:HGNC:29099]
21. SLC12A5 ENSGALG00000042199 1 1 - - - - - - 1.000 - - - solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]
22. RBM15 ENSGALG00000000401 22 1 - - - - - - 1.000 - - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
23. MYO19 9 1 - - - - - - 1.000 - - - myosin XIX, transcript variant X5
24. KLHL30 ENSGALG00000006260 32 1 - - - - - - 1.000 - - - kelch like family member 30 [Source:HGNC Symbol;Acc:HGNC:24770]
25. ZNF469 ENSGALG00000026534 8 1 - - - - - - 1.000 - - - zinc finger protein 469, transcript variant X3
26. SNORD103 SNORD103 25 1 - - - - - - 1.000 - - -
27. SLC6A6 ENSGALG00000006425 31 1 - - - - - - 1.000 - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
28. C1S ENSGALG00000014603 80 1 - - - - - - 1.000 - - - complement C1s [Source:NCBI gene;Acc:418294]
29. CDKL5 ENSGALG00000016529 26 1 - - - - - - 1.000 - - - cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
30. CUBN ENSGALG00000008704 21 1 - - 1.000 - - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
31. snoU109 snoU109 1 1 - - 1.000 - - - - - - -
32. ENSGALG00000011799 ENSGALG00000011799 37 1 - - - - - - 1.000 - - -
33. C8orf88 ENSGALG00000037992 28 1 - - 1.000 - - - - - - - chromosome 8 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:44672]
34. DPYS ENSGALG00000039011 54 1 - - - - - - 1.000 - - - dihydropyrimidinase [Source:NCBI gene;Acc:420266]
35. AOX1 ENSGALG00000008185 14 1 - - - - - - 1.000 - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
36. FBXO43 ENSGALG00000038940 7 1 - - - - - - 1.000 - - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
37. SNORA53 SNORA53 6 1 - - 1.000 - - - - - - -
38. DNAJC6 ENSGALG00000011041 4 1 - - 1.000 - - - - - - - DnaJ heat shock protein family (Hsp40) member C6 [Source:NCBI gene;Acc:424698]
39. KCNQ3 ENSGALG00000037626 6 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
40. SS2 ENSGALG00000003034 277 1 - - - - - - 1.000 - - - somatostatin II [Source:NCBI gene;Acc:395106]
41. FYCO1 ENSGALG00000040212 75 1 - - - - - - 1.000 - - - FYVE and coiled-coil domain containing 1 [Source:NCBI gene;Acc:428453]
42. ENSGALG00000028416 ENSGALG00000028416 11 1 - - - - - - 1.000 - - -
43. LRCH3 ENSGALG00000007595 21 1 - - - - - - 1.000 - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
44. TBC1D20 ENSGALG00000006201 6 1 - - - - - - 1.000 - - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
45. CACNA1C ENSGALG00000013022 322 1 - - - - - - 1.000 - - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
46. SLCO1B1 ENSGALG00000019276 7 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 1B1, transcript variant X1
47. ENSGALG00000004157 ENSGALG00000004157 1 1 - - 1.000 - - - - - - -
48. ENSGALG00000008453 ENSGALG00000008453 1 1 - - 1.000 - - - - - - -
49. NTN1 ENSGALG00000023626 12 1 - - - - - - 1.000 - - - netrin 1 [Source:NCBI gene;Acc:396389]
50. GAREML GAREML 8 1 - - 1.000 - - - - - - -
51. PGA3 ENSGALG00000000437 2 1 - - 1.000 - - - - - - - pepsinogen 3, group I (pepsinogen A) [Source:NCBI gene;Acc:395926]
52. NR4A3 ENSGALG00000013568 1 1 - - - - - - 1.000 - - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
53. MED12 ENSGALG00000036322 814 1 - - - - - - 1.000 - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
54. APOPT1 ENSGALG00000044519 193 1 - - - - - - 1.000 - - - apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:20492]
55. ENSGALG00000026580 ENSGALG00000026580 4 1 - - 1.000 - - - - - - -
56. CRLF1 ENSGALG00000026146 1 1 - - - - - - 1.000 - - - cytokine receptor like factor 1 [Source:HGNC Symbol;Acc:HGNC:2364]
57. TNFRSF6B ENSGALG00000006106 12 1 - - - - - - 1.000 - - - TNF receptor superfamily member 6b [Source:HGNC Symbol;Acc:HGNC:11921]
58. ENSGALG00000015324 ENSGALG00000015324 10 1 - - 1.000 - - - - - - -
59. ENSGALG00000009178 ENSGALG00000009178 1 1 - - 1.000 - - - - - - -
60. CTBS ENSGALG00000008780 26 1 - - 1.000 - - - - - - - chitobiase [Source:HGNC Symbol;Acc:HGNC:2496]
61. LAMP5 ENSGALG00000008918 1 1 - - 1.000 - - - - - - - lysosomal associated membrane protein family member 5 [Source:HGNC Symbol;Acc:HGNC:16097]
62. gga-mir-16c ENSGALG00000024495 1 1 - - 1.000 - - - - - - - gga-mir-16c [Source:miRBase;Acc:MI0007563]
63. BTBD6 ENSGALG00000033813 163 1 - - - - - - 1.000 - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
64. ENSGALG00000025765 ENSGALG00000025765 1 1 - - - - - - 1.000 - - -
65. LVRN ENSGALG00000002318 14 1 - - - - - - 1.000 - - - laeverin [Source:HGNC Symbol;Acc:HGNC:26904]
66. OCSTAMP ENSGALG00000044719 10 1 - - - - - - 1.000 - - - osteoclast stimulatory transmembrane protein [Source:HGNC Symbol;Acc:HGNC:16116]
67. DHX58 ENSGALG00000023821 15 0.994 - - - - - - - 0.994 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
68. CPB1 ENSGALG00000006834 25 0.994 - - - - - - - 0.994 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
69. ENSGALG00000018499 ENSGALG00000018499 100 0.994 - - - - - - - 0.994 - -
70. TAGAP ENSGALG00000013747 34 0.994 - - - - - - - 0.994 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
71. UBE3C ENSGALG00000006461 57 0.994 - - - - - - - 0.994 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
72. KLF11 ENSGALG00000016440 65 0.994 - - - - - - - 0.994 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
73. BRD8 ENSGALG00000037646 100 0.991 - - - - 0.991 - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
74. GPR132 ENSGALG00000027407 9 0.991 - - - - 0.991 - - - - - G protein-coupled receptor 132, transcript variant X2
75. ENSGALG00000018879 ENSGALG00000018879 9 0.991 - - - - 0.991 - - - - -
76. gga-mir-454 ENSGALG00000033526 22 0.989 - - - - - - - 0.989 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
77. SENP7 ENSGALG00000044642 48 0.979 - - - - - - - 0.979 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
78. RAB4A ENSGALG00000036218 20 0.976 - - - - 0.976 - - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
79. LRRC72 9 0.976 - - - - 0.976 - - - - - leucine rich repeat containing 72, transcript variant X4
80. PSTPIP2 ENSGALG00000040136 37 0.975 - - - - - - - 0.975 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
81. PPP2CA_1 ENSGALG00000006462 3170 0.974 - - - - - - - 0.974 - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
82. SH3GL1 ENSGALG00000001121 159 0.974 - - - - - - - 0.974 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
83. GCNT7 ENSGALG00000007717 11 0.973 - - - - 0.973 - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
84. HMGXB3 ENSGALG00000005770 119 0.973 - - - - - - - 0.973 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
85. BTK ENSGALG00000004958 272 0.972 - - - - - - - 0.972 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
86. PVALB1 PVALB1 267 0.97 - - - - - - - 0.970 - -
87. HAGH ENSGALG00000005398 168 0.969 - - - - - - - 0.969 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
88. VIP ENSGALG00000013604 153 0.968 - - - - - - - 0.968 - - vasoactive intestinal peptide [Source:NCBI gene;Acc:396323]
89. PARM1 ENSGALG00000010268 13 0.962 - - - - - - - 0.962 - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
90. LOC416530 ENSGALG00000005291 207 0.962 - - - - 0.962 - - - - - uncharacterized LOC416530, transcript variant X1
91. STXBP5L ENSGALG00000032361 41 0.96 - - - - 0.960 - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
92. ZDHHC20 ENSGALG00000017126 58 0.959 - - - - - - - 0.959 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
93. GALNT11 ENSGALG00000006233 210 0.958 - - - - 0.958 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
94. FBXO22 ENSGALG00000039897 377 0.956 - - - - - - - 0.956 - - F-box protein 22 [Source:NCBI gene;Acc:415355]
95. SLC6A2 ENSGALG00000003560 108 0.953 - - - - - - - 0.953 - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
96. CCDC113 20 0.951 - - - - 0.951 - - - - - coiled-coil domain containing 113, transcript variant X2
97. PCASP2 ENSGALG00000027961 42 0.951 - - - - - - - 0.951 - - paracaspase 2 [Source:NCBI gene;Acc:429451]
98. EPC1 ENSGALG00000007169 101 0.95 - - - - - - - 0.950 - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
99. PITX1 ENSGALG00000030237 842 0.948 - - - - 0.948 - - - - - paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
100. CCDC73 ENSGALG00000012103 17 0.94 - - - - - - - 0.940 - - coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]

There are 238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA