Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IRF-3

Gene Name Gene ID Reads Annotation
IRF-3 IRF-3 129











Genes with expression patterns similar to IRF-3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IRF-3 IRF-3 129 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. RGS9 ENSGALG00000029610 112 0.925 - - - - - 0.925 - - - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
3. CRABP2 ENSGALG00000029140 559 0.895 - - - - - 0.895 - - - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
4. USP13 ENSGALG00000008909 8 0.885 - - - - - - - - - 0.885 ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:NCBI gene;Acc:429286]
5. ADH6 ENSGALG00000020160 29 0.878 - - - - - 0.878 - - - - alcohol dehydrogenase 6 (class V) [Source:NCBI gene;Acc:395979]
6. LXN ENSGALG00000009651 128 0.867 - - - - - 0.867 - - - - latexin [Source:NCBI gene;Acc:771519]
7. PARK2 166 0.863 - - - - - 0.863 - - - - parkin RBR E3 ubiquitin protein ligase
8. ABLIM2 ENSGALG00000043448 48 0.855 - - - - - 0.855 - - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
9. CETP ENSGALG00000001234 18 0.855 - - - - - 0.855 - - - - cholesteryl ester transfer protein [Source:NCBI gene;Acc:415645]
10. ARHGEF26 ENSGALG00000010352 3 0.855 - - - - - 0.855 - - - - Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
11. ENSGALG00000012324 ENSGALG00000012324 4 0.855 - - - - - 0.855 - - - -
12. ENSGALG00000025872 ENSGALG00000025872 5 0.855 - - - - - 0.855 - - - -
13. GBF1 ENSGALG00000005637 32 0.855 - - - - - 0.855 - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
14. ABHD3 ENSGALG00000014938 9 0.855 - - - - - 0.855 - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
15. SREBP-1 SREBP-1 2 0.855 - - - - - 0.855 - - - -
16. SPEF2 ENSGALG00000023552 23 0.855 - - - - - 0.855 - - - - sperm flagellar 2 [Source:HGNC Symbol;Acc:HGNC:26293]
17. NME8 ENSGALG00000029677 2 0.855 - - - - - 0.855 - - - - NME/NM23 family member 8 [Source:HGNC Symbol;Acc:HGNC:16473]
18. TOPAZ1 18 0.855 - - - - - 0.855 - - - - testis and ovary specific PAZ domain containing 1, transcript variant X6
19. ENSGALG00000005511 ENSGALG00000005511 7 0.855 - - - - - 0.855 - - - -
20. AMY1A ENSGALG00000005147 3 0.855 - - - - - 0.855 - - - - amylase, alpha 1A; hepatic [Source:NCBI gene;Acc:414139]
21. BOK ENSGALG00000005772 117 0.855 - - - - - 0.855 - - - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
22. SLN ENSGALG00000017168 3 0.855 - - - - - 0.855 - - - - sarcolipin [Source:NCBI gene;Acc:100857277]
23. SNORA75 SNORA75 41 0.855 - - - - - 0.855 - - - -
24. B3GALT2 ENSGALG00000002477 13 0.855 - - - - - 0.855 - - - - beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
25. CLDN20 ENSGALG00000027634 25 0.855 - - - - - 0.855 - - - - claudin 20 [Source:HGNC Symbol;Acc:HGNC:2042]
26. ZNF362 ENSGALG00000026558 11 0.855 - - - - - 0.855 - - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
27. BCL2L14 ENSGALG00000011544 11 0.855 - - - - - 0.855 - - - - BCL2 like 14 [Source:HGNC Symbol;Acc:HGNC:16657]
28. CD320 ENSGALG00000021688 3 0.855 - - - - - 0.855 - - - - CD320 molecule [Source:NCBI gene;Acc:420066]
29. LRIT2 ENSGALG00000002307 2 0.855 - - - - - 0.855 - - - - leucine rich repeat, Ig-like and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:23443]
30. DUS4L ENSGALG00000023661 29 0.855 - - - - - 0.855 - - - - dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
31. MCMDC2 ENSGALG00000031863 3 0.855 - - - - - 0.855 - - - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
32. PLA2G1BL ENSGALG00000007236 4 0.855 - - - - - 0.855 - - - - phospholipase A2, major isoenzyme-like
33. RGR ENSGALG00000002299 17 0.855 - - - - - 0.855 - - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
34. MTFMT ENSGALG00000007353 805 0.854 - - - - - 0.854 - - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
35. WDFY4 ENSGALG00000006165 22 0.853 - - - - - 0.853 - - - - WDFY family member 4 [Source:HGNC Symbol;Acc:HGNC:29323]
36. SEPP1 SEPP1 35 0.852 - - - - - 0.852 - - - -
37. ZNF777 ENSGALG00000038657 3 0.849 - - - - - 0.849 - - - - zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
38. ENSGALG00000010590 ENSGALG00000010590 6 0.842 - - - - - - - - - 0.842
39. KLHL14 ENSGALG00000036969 3 0.837 - - - - - 0.837 - - - - kelch like family member 14 [Source:NCBI gene;Acc:421100]
40. SYT1 ENSGALG00000041094 74 0.837 - - - - - 0.837 - - - - synaptotagmin 1 [Source:NCBI gene;Acc:396083]
41. PRC1 ENSGALG00000012836 20 0.833 - - - - - 0.833 - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
42. RBM41 ENSGALG00000004832 838 0.827 - - - - - 0.827 - - - - RNA binding motif protein 41 [Source:HGNC Symbol;Acc:HGNC:25617]
43. gga-mir-1766 ENSGALG00000028725 54 0.826 - - - - - - - 0.826 - - gga-mir-1766 [Source:miRBase;Acc:MI0007508]
44. PROCR ENSGALG00000006547 645 0.82 - - - - - 0.820 - - - - protein C receptor [Source:NCBI gene;Acc:424867]
45. ABCA8 ENSGALG00000021399 11 0.819 - - - - - - - - - 0.819 ATP binding cassette subfamily A member 8
46. LPCAT1 ENSGALG00000013189 197 0.818 - - - - - 0.818 - - - - lysophosphatidylcholine acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:25718]
47. PSD2 ENSGALG00000030836 236 0.812 - - - - - 0.812 - - - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
48. KIAA0040 ENSGALG00000030543 53 0.809 - - - - - 0.809 - - - - KIAA0040 [Source:HGNC Symbol;Acc:HGNC:28950]
49. ENSGALG00000000346 ENSGALG00000000346 130 0.809 - - - - - 0.809 - - - -
50. gga-mir-1600 ENSGALG00000025438 248 0.807 - - - - - 0.807 - - - - gga-mir-1600 [Source:miRBase;Acc:MI0007327]
51. GNPDA1 ENSGALG00000040594 13 0.802 - - - - - 0.802 - - - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
52. ENSGALG00000000099 ENSGALG00000000099 16 0.8 - - - - - 0.800 - - - -
53. ACOX2 ENSGALG00000007132 47 0.798 - - - - - - - 0.798 - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
54. SLC6A6 ENSGALG00000006425 31 0.797 - - - - - 0.797 - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
55. ENSGALG00000023694 ENSGALG00000023694 45 0.795 - - - - - 0.795 - - - -
56. RFX8 ENSGALG00000045388 17 0.79 - - - - - 0.790 - - - - RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]
57. NOG2 ENSGALG00000039817 5 0.789 - - - - - 0.789 - - - - noggin 2 [Source:NCBI gene;Acc:427689]
58. HMOX1 ENSGALG00000012550 1186 0.785 - - - - - 0.785 - - - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
59. PALM ENSGALG00000026055 8 0.782 - - - - - 0.782 - - - - paralemmin [Source:NCBI gene;Acc:101750199]
60. CD300A CD300A 173 0.782 - - - - - 0.782 - - - -
61. AAGAB ENSGALG00000007887 142 0.781 - - - - - 0.781 - - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
62. ABCA7 ENSGALG00000002453 22 0.779 - - - - - - - 0.779 - - ATP-binding cassette, sub-family A (ABC1), member 7, transcript variant X5
63. ERBB2 ENSGALG00000031529 313 0.774 - - - - - 0.774 - - - - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
64. HIPK1 ENSGALG00000001939 26 0.771 - - - - - 0.771 - - - - homeodomain interacting protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:19006]
65. ENSGALG00000026913 ENSGALG00000026913 12 0.771 - - - - - 0.771 - - - -
66. ADAM12 ENSGALG00000041255 796 0.77 - - - - - - - 0.770 - - ADAM metallopeptidase domain 12 [Source:NCBI gene;Acc:425843]
67. GPR144 GPR144 30 0.769 - - - - - - - - - 0.769
68. NUAK1 ENSGALG00000012662 411 0.769 - - - - - 0.769 - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
69. POPDC2 ENSGALG00000014988 281 0.767 - - - - - - - 0.767 - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
70. C22orf39 ENSGALG00000044654 1364 0.764 - - - - - 0.764 - - - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
71. ATP2A3 ENSGALG00000001564 18 0.763 - - - - - 0.763 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:NCBI gene;Acc:395707]
72. IGF2R ENSGALG00000011621 81 0.763 - - - - - 0.763 - - - - insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
73. TTC18 TTC18 139 0.763 - - - - - - - - - 0.763
74. TOR1B TOR1B 197 0.763 - - - - - 0.763 - - - -
75. WFDC2 ENSGALG00000031164 37 0.762 - - - - - - - 0.762 - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
76. WDR34 ENSGALG00000004702 909 0.762 - - - - - - - 0.762 - - WD repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:28296]
77. LRRC8D ENSGALG00000020805 164 0.761 - - - - - - - 0.761 - - leucine rich repeat containing 8 VRAC subunit D [Source:HGNC Symbol;Acc:HGNC:16992]
78. DNAH7 ENSGALG00000007841 32 0.76 - - - - - 0.760 - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
79. PDGFD ENSGALG00000017179 1517 0.76 - - - - - - - 0.760 - - platelet derived growth factor D [Source:NCBI gene;Acc:418978]
80. PKD2 ENSGALG00000010921 55 0.758 - - - - - - - 0.758 - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
81. NTN1 ENSGALG00000023626 12 0.757 - - - - - - - - - 0.757 netrin 1 [Source:NCBI gene;Acc:396389]
82. MB ENSGALG00000012541 260 0.757 - - - - - 0.757 - - - - myoglobin [Source:NCBI gene;Acc:418056]
83. ATP9A ENSGALG00000007912 25 0.755 - - - - - 0.755 - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
84. SYT15 ENSGALG00000002046 3 0.753 - - - - - - - - - 0.753 synaptotagmin 15, transcript variant X1
85. DUSP11RC1I ENSGALG00000020775 57 0.75 - - - - - 0.750 - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting), transcript variant X12
86. LY86 ENSGALG00000012801 865 0.745 - - 0.745 - - - - - - - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
87. SOUL ENSGALG00000012464 52 0.741 - - - - - 0.741 - - - - SOUL protein [Source:NCBI gene;Acc:395567]
88. NECAB3 ENSGALG00000003065 417 0.741 - - - - - 0.741 - - - - N-terminal EF-hand calcium binding protein 3 [Source:NCBI gene;Acc:419154]
89. PLS1 ENSGALG00000002647 53 0.741 - - - - - - - - - 0.741 plastin 1 [Source:NCBI gene;Acc:396291]
90. C17orf58 ENSGALG00000003590 4 0.738 - - - - - - - - - 0.738 chromosome 17 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:27568]
91. TMOD2 ENSGALG00000004740 6 0.738 - - - - - - - - - 0.738 tropomodulin 2 [Source:HGNC Symbol;Acc:HGNC:11872]
92. ENSGALG00000004050 ENSGALG00000004050 9 0.738 - - - - - - - - - 0.738
93. C1QTNF2 ENSGALG00000027232 42 0.738 - - - - - - - - - 0.738 C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
94. WNT3A ENSGALG00000042657 22 0.738 - - - - - - - - - 0.738 Wnt family member 3A [Source:NCBI gene;Acc:395396]
95. AK7 ENSGALG00000011093 9 0.738 - - - - - - - - - 0.738 adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
96. FAM81A ENSGALG00000004103 8 0.738 - - - - - - - - - 0.738 family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
97. IRG1 IRG1 21 0.738 - - - - - - - - - 0.738
98. SYN3 5 0.738 - - - - - - - - - 0.738 synapsin III
99. NKX2-1 ENSGALG00000037632 7 0.738 - - - - - - - - - 0.738 NK2 homeobox 1 [Source:NCBI gene;Acc:395322]
100. MAP3K19 ENSGALG00000028457 17 0.738 - - - - - - - - - 0.738 mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]

There are 60 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA