Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for IPP

Gene Name Gene ID Reads Annotation
IPP ENSDARG00000075339 194 intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]










Genes with expression patterns similar to IPP

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. IPP ENSDARG00000075339 194 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
2. slc6a6a ENSDARG00000012534 183 2.422 - 0.758 - - - 0.708 - 0.956 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
3. pdxka ENSDARG00000088959 217 2.356 - 0.700 - - - 0.726 - 0.930 - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
4. hn1a hn1a 115 1.728 - - - - - - 0.775 0.953 -
5. pus7 ENSDARG00000031774 195 1.728 0.774 - - - - - - 0.954 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
6. TFPT ENSDARG00000089572, ENSDARG00000111694 112 1.721 - - - - - - 0.767 0.954 - TCF3 (E2A) fusion partner [Source:ZFIN;Acc:ZDB-GENE-140106-241]
7. C20H1orf112 C20H1orf112 316 1.714 - - - - - - 0.782 0.932 -
8. si:dkey-100h21.2 si:dkey-100h21.2 30 1.713 0.754 - - - - - - 0.959 -
9. BX005410.2 BX005410.2 44 1.706 - - - - - - - 0.962 0.744
10. enosf1 ENSDARG00000038359 209 1.683 - 0.740 - - - - - 0.943 - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
11. CABZ01045230.1 CABZ01045230.1 158 1.68 - 0.738 - - - - - 0.942 -
12. tmie ENSDARG00000069423 305 1.676 - 0.754 - - - - - 0.922 - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
13. pex16 ENSDARG00000058202 486 1.671 - - - - - - 0.763 0.908 - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
14. C8H17orf59 C8H17orf59 494 1.665 - 0.748 - - - - - 0.917 -
15. si:dkey-14k9.3 ENSDARG00000045595 256 1.636 - - - - - 0.739 - 0.897 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
16. BX649282.1 ENSDARG00000105704 347 1.605 - - - - - - 0.707 0.898 -
17. si:ch211-162i8.6 si:ch211-162i8.6 15 1.596 0.744 - - - - - - - 0.852
18. irx3b ENSDARG00000031138 2538 1.581 - - - - - - 0.816 0.765 - iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
19. RSPH1 289 1.544 - - - - - - 0.756 0.788 - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
20. srd5a1 ENSDARG00000020509 242 1.536 - - - - - 0.738 0.798 - - steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) [Source:ZFIN;Acc:ZDB-GENE-060929-938]
21. fam174b ENSDARG00000068709 1171 1.527 0.787 - - - - - 0.740 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
22. mrpl20 ENSDARG00000090462 791 1.526 - - - - - - 0.732 0.794 - mitochondrial ribosomal protein L20 [Source:ZFIN;Acc:ZDB-GENE-030131-5299]
23. plekhm2 ENSDARG00000078850 207 1.515 0.715 - - - - - - 0.800 - pleckstrin homology domain containing, family M (with RUN domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081022-169]
24. DHRS13 DHRS13 218 1.512 - 0.741 - - - - 0.771 - -
25. trove2 ENSDARG00000089225 430 1.507 0.783 0.724 - - - - - - - TROVE domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-051113-300]
26. si:dkey-30j10.5 ENSDARG00000093186 13 1.479 0.754 0.725 - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
27. znf142 ENSDARG00000061373 47 1.479 0.754 0.725 - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
28. zgc:55413 79 1.478 0.708 0.770 - - - - - - - zgc:55413
29. cdh5 ENSDARG00000075549 2288 1.474 0.726 - - - - - - 0.748 - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
30. iqsec2 iqsec2 304 1.457 - 0.704 - - - - - 0.753 -
31. tfap4 ENSDARG00000103923 2203 1.437 - - - - - 0.722 0.715 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
32. fam135a ENSDARG00000059843 2352 1.433 - - - - - 0.730 0.703 - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
33. ppp1r42 ENSDARG00000057632 32 1.419 0.703 - - - - 0.716 - - - protein phosphatase 1, regulatory subunit 42 [Source:ZFIN;Acc:ZDB-GENE-040704-43]
34. zgc:122979 ENSDARG00000004187 61 0.975 - - - - - - - 0.975 - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
35. rwdd2b ENSDARG00000055426 294 0.971 - - - - - - - 0.971 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
36. nrp2b ENSDARG00000038446 783 0.965 - - - - - - - 0.965 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
37. VDAC3 ENSDARG00000003695 34 0.961 - - - - - - - 0.961 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
38. si:ch211-283g2.2 ENSDARG00000108340, ENSDARG00000108953 59 0.961 - - - - - - - 0.961 - si:ch211-283g2.2 [Source:ZFIN;Acc:ZDB-GENE-060526-151]
39. si:ch73-167f18.3 si:ch73-167f18.3 78 0.959 - - - - - - - 0.959 -
40. jam3a ENSDARG00000114589 630 0.959 - - - - - - - 0.959 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
41. adcyap1a ENSDARG00000004015 67 0.959 - - - - - - - 0.959 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
42. IKZF4 ENSDARG00000037068 36 0.959 - - - - - - - 0.959 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
43. pde6b ENSDARG00000011671 44 0.959 - - - - - - - 0.959 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
44. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.959 - - - - - - - 0.959 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
45. mir130b 180 0.958 - - - - - - - 0.958 - microRNA 130b
46. zgc:162948 ENSDARG00000053695 301 0.958 - - - - - - - 0.958 - zgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
47. hoxa4a 37 0.957 - - - - - - - 0.957 - homeobox A4a, transcript variant X4
48. GDPD4_1 GDPD4_1 190 0.957 - - - - - - - 0.957 -
49. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.957 - - - - - - - 0.957 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
50. spef2 ENSDARG00000098330 59 0.956 - - - - - - - 0.956 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
51. ptpdc1 ptpdc1 281 0.956 - - - - - - - 0.956 -
52. MAP7 MAP7 98 0.956 - - - - - - - 0.956 -
53. SHANK1 ENSDARG00000060539 102 0.955 - - - - - - - 0.955 - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
54. tarsl2 ENSDARG00000092774 505 0.955 - - - - - - - 0.955 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
55. ankdd1b ENSDARG00000025866 51 0.955 - - - - - - - 0.955 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
56. prkag3b ENSDARG00000000369 1945 0.955 - - - - - - - 0.955 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
57. ly75 ENSDARG00000053113 196 0.954 - - - - - - - 0.954 - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
58. p2rx3b ENSDARG00000029718 105 0.953 - - - - - - - 0.953 - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
59. si:dkey-17e6.2 si:dkey-17e6.2 72 0.953 - - - - - - - 0.953 -
60. CR381544.1 ENSDARG00000088187 821 0.953 - - - - - - - 0.953 -
61. si:dkey-157e10.7 si:dkey-157e10.7 105 0.953 - - - - - - - 0.953 -
62. TTF1_4 TTF1_4 504 0.952 - - - - - - - 0.952 -
63. rpgra ENSDARG00000056617 77 0.951 - - - - - - - 0.951 - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
64. nrxn2b ENSDARG00000063150 343 0.951 - - - - - - - 0.951 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
65. KBTBD13_1 KBTBD13_1 116 0.949 - - - - - - - 0.949 -
66. b3galtla b3galtla 111 0.949 - - - - - - - 0.949 -
67. zgc:174688 zgc:174688 170 0.948 - - - - - - - 0.948 -
68. CIT CIT 212 0.947 - - - - - - - 0.947 -
69. mea1 ENSDARG00000039820 589 0.946 - - - - - - - 0.946 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
70. zdhhc14 ENSDARG00000037069 479 0.946 - - - - - - - 0.946 - zinc finger, DHHC-type containing 14 [Source:ZFIN;Acc:ZDB-GENE-040724-21]
71. si:dkey-253d23.2 ENSDARG00000071589 143 0.946 - - - - - - - 0.946 - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
72. pard3 pard3 161 0.945 - - - - - - - 0.945 -
73. si:dkey-8k3.2 ENSDARG00000038424 285 0.945 - - - - - - - 0.945 - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
74. aatkb ENSDARG00000104442 392 0.945 - - - - - - - 0.945 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
75. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.945 - - - - - - - 0.945 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
76. pars2 ENSDARG00000044404, ENSDARG00000109425 271 0.945 - - - - - - - 0.945 - prolyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4219]
77. bola1 ENSDARG00000039915 658 0.944 - - - - - - - 0.944 - bolA family member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-76]
78. BX511021.1 ENSDARG00000073936 647 0.944 - - - - - - - 0.944 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
79. commd1 ENSDARG00000031203 340 0.944 - - - - - - - 0.944 - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
80. reep1 ENSDARG00000014854 915 0.943 - - - - - - - 0.943 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
81. ncoa6 ENSDARG00000071272 759 0.943 - - - - - - - 0.943 - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
82. TCAIM ENSDARG00000079881 424 0.941 - - - - - - - 0.941 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
83. cyp4v8 ENSDARG00000062132, ENSDARG00000111608 92 0.941 - - - - - - - 0.941 - cytochrome P450, family 4, subfamily V, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-061103-601]
84. usp4 ENSDARG00000014770 1684 0.941 - - - - - - - 0.941 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
85. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.94 - - - - - - - 0.940 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
86. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 0.94 - - - - - - - 0.940 - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
87. zgc:174877 ENSDARG00000079278 143 0.94 - - - - - - - 0.940 - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
88. ANGPT4 ENSDARG00000076787 140 0.939 - - - - - - - 0.939 - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
89. dclk1a ENSDARG00000018856 177 0.937 - - - - - - - 0.937 - doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]
90. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.937 - - - - - - - 0.937 - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
91. fgf12a ENSDARG00000027957 143 0.936 - - - - - - - 0.936 - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
92. camk2d1 ENSDARG00000043010 669 0.936 - - - - - - - 0.936 - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
93. ctdspla ENSDARG00000071673 1447 0.935 - - - - - - - 0.935 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
94. timm10 ENSDARG00000069116 4459 0.935 - - - - - - - 0.935 - translocase of inner mitochondrial membrane 10 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-427]
95. smarcd2 ENSDARG00000088877 416 0.934 - - - - - - - 0.934 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
96. tmprss4a ENSDARG00000103117 841 0.934 - - - - - - - 0.934 - transmembrane serine protease 4a [Source:ZFIN;Acc:ZDB-GENE-061103-631]
97. HYKK HYKK 261 0.934 - - - - - - - 0.934 -
98. ALPK1 195 0.934 - - - - - - - 0.934 - alpha-kinase 1
99. CABZ01080599.2 CABZ01080599.2 192 0.934 - - - - - - - 0.934 -
100. pik3c3 ENSDARG00000054829 559 0.932 - - - - - - - 0.932 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]

There are 1065 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA