Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IMP4

Gene Name Gene ID Reads Annotation
IMP4 ENSGALG00000029152 11669 IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]











Genes with expression patterns similar to IMP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IMP4 ENSGALG00000029152 11669 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
2. FAM103A1 17380 1.861 - - - - - - 0.991 0.870 - - family with sequence similarity 103 member A1, transcript variant X2
3. MRPL32 ENSGALG00000037258 6861 1.774 - - - - - - 0.998 0.776 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
4. ENSGALG00000004773 ENSGALG00000004773 10418 0.998 - - - - - - 0.998 - - -
5. EIF3J ENSGALG00000008187 43570 0.998 - - - - - - 0.998 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
6. M6PR ENSGALG00000031681 9442 0.998 - - - - - - 0.998 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
7. POLR1C ENSGALG00000010349 7059 0.998 - - - - - - 0.998 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
8. MOB3A ENSGALG00000031729 9690 0.998 - - - - - - 0.998 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
9. CTU2 4818 0.997 - - - - - - 0.997 - - - cytosolic thiouridylase subunit 2, transcript variant X3
10. TMEM97 ENSGALG00000005702 2037 0.997 - - - - - - 0.997 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
11. ENSGALG00000014190 ENSGALG00000014190 5735 0.997 - - - - - - 0.997 - - -
12. POLR2D ENSGALG00000002057 14548 0.997 - - - - - - 0.997 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
13. CAND1 4541 0.997 - - - - - - 0.997 - - - cullin associated and neddylation dissociated 1
14. HOXD8 ENSGALG00000037272 4338 0.997 - - - - - - 0.997 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
15. PTBP2 ENSGALG00000005552 3443 0.997 - - - - - - 0.997 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
16. TMEM120B ENSGALG00000004254 2819 0.997 - - - - - - 0.997 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
17. ABCC10 2213 0.997 - - - - - - 0.997 - - - ATP binding cassette subfamily C member 10, transcript variant X10
18. TMEM62 ENSGALG00000009260 1170 0.996 - - - - - - 0.996 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
19. TMC1 ENSGALG00000015145 1180 0.996 - - - - - - 0.996 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
20. EGFLAM ENSGALG00000003726 4588 0.996 - - - - - - 0.996 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
21. BMP3 ENSGALG00000035052 3260 0.996 - - - - - - 0.996 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
22. PFDN4 ENSGALG00000007792 26514 0.995 - - - - - - 0.995 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
23. PHGDH ENSGALG00000002988 6912 0.993 - - - - - - 0.993 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
24. ATP5MC1 ENSGALG00000001330 37766 0.993 - - - - - - 0.993 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
25. PRDX6 ENSGALG00000003053 17928 0.992 - - - - - - 0.992 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
26. FBN3 ENSGALG00000037625 23313 0.992 - - - - - - 0.992 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
27. MCM2 ENSGALG00000006037 13458 0.991 - - - - - - 0.991 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
28. ITGA1 ENSGALG00000014891 11378 0.989 - - - - - - 0.989 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
29. DYNLL2 ENSGALG00000005522 17107 0.988 - - - - - - 0.988 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
30. DDX21 ENSGALG00000004144 13105 0.988 - - - - - - 0.988 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
31. SMC2 ENSGALG00000015691 34013 0.987 - - - - - - 0.987 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
32. DENR ENSGALG00000003795 30805 0.987 - - - - - - 0.987 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
33. CHNTHL1 CHNTHL1 4976 0.986 - - - - - - 0.986 - - -
34. ALDH1A2 ENSGALG00000004270 49483 0.945 - - - - - - 0.945 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
35. CALM_1 CALM_1 57812 0.942 - - - - - - 0.942 - - -
36. NOC3L ENSGALG00000035667 7441 0.926 - - - - - - - 0.926 - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
37. WDFY2 ENSGALG00000017019 2384 0.923 - - - - - - - 0.923 - - WD repeat and FYVE domain containing 2 [Source:NCBI gene;Acc:770107]
38. ATP2A2 ENSGALG00000032287 12734 0.918 - - - - - - 0.918 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
39. UQCRFS1 ENSGALG00000025819 66637 0.91 - - - - - - 0.910 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
40. MRPS10 ENSGALG00000009890 9157 0.885 - - - - - - - 0.885 - - mitochondrial ribosomal protein S10 [Source:NCBI gene;Acc:421385]
41. CRABP-I ENSGALG00000003193 67258 0.871 - - - - - - - 0.871 - - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
42. PARVB ENSGALG00000014201 27559 0.845 - - - - - - 0.845 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
43. POLR2E ENSGALG00000002591 26405 0.817 - - - - - - 0.817 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
44. CHERP ENSGALG00000003824 11489 0.815 - - - - - - 0.815 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
45. IMMT ENSGALG00000015783 25009 0.805 - - - - - - - 0.805 - - inner membrane mitochondrial protein [Source:NCBI gene;Acc:422912]
46. ADAMTS6 ENSGALG00000014751 1293 0.777 - - - - - - - 0.777 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
47. NEO1 ENSGALG00000001774 10165 0.776 - - - - - - - 0.776 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
48. FSBP 3152 0.776 - - - - - - - 0.776 - - fibrinogen silencer binding protein
49. RAD52 ENSGALG00000039171 6989 0.776 - - - - - - - 0.776 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
50. DIMT1 ENSGALG00000020569 5150 0.775 - - - - - - - 0.775 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
51. CCDC15 1759 0.775 - - - - - - - 0.775 - - coiled-coil domain containing 15
52. KCNK2 ENSGALG00000009687 1552 0.775 - - - - - - - 0.775 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
53. EFR3B ENSGALG00000016605 234 0.774 - - - - - - - 0.774 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
54. KIF1A ENSGALG00000006221 1989 0.774 - - - - - - - 0.774 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
55. TNNI1 ENSGALG00000000313 4069 0.774 - - - - - - - 0.774 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
56. ENSGALG00000006278 ENSGALG00000006278 202 0.774 - - - - - - - 0.774 - -
57. MIEN1 ENSGALG00000026328 3396 0.774 - - - - - - - 0.774 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
58. FAXDC2 ENSGALG00000003972 172 0.774 - - - - - - - 0.774 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
59. SYNM ENSGALG00000007048 705 0.774 - - - - - - - 0.774 - - synemin [Source:NCBI gene;Acc:395599]
60. ARHGEF18 ENSGALG00000003572 224 0.774 - - - - - - - 0.774 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
61. TMEM200C ENSGALG00000030210 1434 0.774 - - - - - - - 0.774 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
62. ATP11B ENSGALG00000008839 3455 0.773 - - - - - - - 0.773 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
63. ENSGALG00000002852 ENSGALG00000002852 2687 0.773 - - - - - - - 0.773 - -
64. RAC2 ENSGALG00000012456 987 0.773 - - - - - - - 0.773 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
65. PIGB ENSGALG00000037734 2193 0.772 - - - - - - - 0.772 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
66. MGST3 ENSGALG00000003445 50408 0.772 - - - - - - 0.772 - - - microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
67. PRDM6 ENSGALG00000005351 2078 0.771 - - - - - - - 0.771 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
68. SULF1 ENSGALG00000039553 5115 0.771 - - - - - - - 0.771 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
69. CNPY3 ENSGALG00000028471 1413 0.771 - - - - - - - 0.771 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
70. ZCCHC10 ENSGALG00000036666 5148 0.77 - - - - - - - 0.770 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
71. NKIRAS2 ENSGALG00000028971 3414 0.77 - - - - - - - 0.770 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
72. DEPDC1B ENSGALG00000014729 5334 0.769 - - - - - - - 0.769 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
73. SIRT6 ENSGALG00000001245 3716 0.769 - - - - - - - 0.769 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
74. RAB20 ENSGALG00000016844 3250 0.769 - - - - - - - 0.769 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
75. SFXN1 ENSGALG00000033956 2713 0.769 - - - - - - - 0.769 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
76. DCK ENSGALG00000028501 8675 0.768 - - - - - - - 0.768 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
77. TMEM26 ENSGALG00000025862 2222 0.768 - - - - - - - 0.768 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
78. IVD ENSGALG00000040267 5820 0.767 - - - - - - - 0.767 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
79. CDKAL1 ENSGALG00000012677 4733 0.767 - - - - - - - 0.767 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
80. TEX10 ENSGALG00000013438 3121 0.767 - - - - - - - 0.767 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
81. LZIC ENSGALG00000002616 9052 0.766 - - - - - - 0.766 - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
82. ACVR2B ENSGALG00000006158 8692 0.766 - - - - - - - 0.766 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
83. MTFR2 ENSGALG00000019967 4436 0.765 - - - - - - - 0.765 - - mitochondrial fission regulator 2, transcript variant X1
84. LRRC59 ENSGALG00000007673 2081 0.765 - - - - - - - 0.765 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
85. TMEM60 ENSGALG00000008330 6303 0.765 - - - - - - - 0.765 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
86. BLCAP ENSGALG00000027126 12200 0.765 - - - - - - - 0.765 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
87. HPS4 ENSGALG00000005595 2217 0.765 - - - - - - - 0.765 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
88. DAB2 ENSGALG00000003803 6143 0.762 - - - - - - - 0.762 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
89. COPS8 ENSGALG00000033385 10166 0.761 - - - - - - - 0.761 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
90. SIGMAR1 ENSGALG00000028996 12267 0.758 - - - - 0.758 - - - - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
91. MYO9A ENSGALG00000033618 4505 0.757 - - - - - - - 0.757 - - myosin IXA, transcript variant X10
92. AVENAII AVENAII 4552 0.757 - - - - - - - 0.757 - -
93. SPR ENSGALG00000000067 3456 0.752 - - - - - - - 0.752 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
94. MAU2 ENSGALG00000002969 10604 0.751 - - - - - - 0.751 - - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
95. BEND5 ENSGALG00000010505 3298 0.751 - - - - - - - 0.751 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
96. GNL2 ENSGALG00000001973 10148 0.75 - - - - - - - 0.750 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
97. YIPF1 5945 0.748 - - - - - - - 0.748 - - Yip1 domain family member 1, transcript variant 4
98. TTC37 ENSGALG00000014670 5715 0.747 - - - - - - - 0.747 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
99. TM9SF2L ENSGALG00000006487 5566 0.746 - - - - - - - 0.746 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
100. CCDC58 ENSGALG00000014413 9022 0.746 - - - - - - - 0.746 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]

There are 24 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA