Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for IFT88

Gene Name Gene ID Reads Annotation
IFT88 1241 intraflagellar transport 88, transcript variant X3











Genes with expression patterns similar to IFT88

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IFT88 1241 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 88, transcript variant X3
2. EDARADD ENSGALG00000031763 541 2.16 - - 0.705 - - - 0.723 0.732 - - EDAR associated death domain [Source:NCBI gene;Acc:497625]
3. GRHPR ENSGALG00000005423 1567 1.67 - - - - - - - 0.913 0.757 - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
4. ENSGALG00000024035 ENSGALG00000024035 544 1.616 - - - - - - 0.738 0.878 - -
5. PAMR1 ENSGALG00000007886 928 1.586 - - - - - - 0.830 - 0.756 - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
6. EPHA1 ENSGALG00000014687 174 1.581 - - - - - - 0.749 0.832 - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
7. CSRP1 ENSGALG00000000318 3702 1.579 - - - - - - - 0.745 0.834 - cysteine and glycine rich protein 1 [Source:NCBI gene;Acc:396176]
8. SLC22A23 ENSGALG00000012816 946 1.552 - - - - - - - 0.838 0.714 - solute carrier family 22 member 23 [Source:HGNC Symbol;Acc:HGNC:21106]
9. ODZ2 ODZ2 1380 1.54 - - - - - - 0.713 - 0.827 -
10. FANCB ENSGALG00000016569 1193 1.533 - - - - - - - 0.734 0.799 - FA complementation group B [Source:NCBI gene;Acc:418628]
11. RAD17 ENSGALG00000015571 1374 1.504 - - - - - - - 0.711 0.793 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
12. ECM2 ENSGALG00000004695 375 1.469 - - - - - - - 0.710 0.759 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
13. PTDSS2 ENSGALG00000004300 682 0.96 - - - - - - - 0.960 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
14. FHL1 ENSGALG00000006190 22 0.959 - - - - - - - 0.959 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
15. PAPSS2 ENSGALG00000003689 278 0.958 - - - - - - - 0.958 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
16. MIF4GD ENSGALG00000026715 41 0.957 - - - - - - - 0.957 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
17. LOX ENSGALG00000028063 1488 0.956 - - - - - - - 0.956 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
18. ADAM17 ENSGALG00000016427 49 0.956 - - - - - - - 0.956 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
19. PC7 PC7 1105 0.955 - - - - - - - 0.955 - -
20. ENSGALG00000026913 ENSGALG00000026913 12 0.955 - - - - - - - 0.955 - -
21. AVP ENSGALG00000014117 19 0.955 - - - - - - - 0.955 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
22. ABCA4 ENSGALG00000005752 15 0.955 - - - - - - - 0.955 - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
23. METTL24 ENSGALG00000041120 60 0.955 - - - - - - - 0.955 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
24. WNT16 ENSGALG00000028069 157 0.954 - - - - - - - 0.954 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
25. CCDC102A ENSGALG00000029999 324 0.954 - - - - - - - 0.954 - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
26. ENSGALG00000016213 ENSGALG00000016213 33 0.953 - - - - - - - 0.953 - -
27. OSBP ENSGALG00000030548 439 0.953 - - - - - - - 0.953 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
28. TGM4 ENSGALG00000033171 19 0.952 - - - - - - - 0.952 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
29. PLXNC1 ENSGALG00000011309 69 0.952 - - - - - - - 0.952 - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
30. TMEM45B ENSGALG00000001203 48 0.95 - - - - - - - 0.950 - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
31. SOD3 ENSGALG00000018557 16 0.948 - - - - - - - 0.948 - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
32. ARSD ENSGALG00000016648 33 0.948 - - - - - - - 0.948 - - arylsulfatase D, transcript variant X1
33. ENSGALG00000027352 ENSGALG00000027352 69 0.946 - - - - - - - 0.946 - -
34. P4HB ENSGALG00000038290 286 0.945 - - - - - - - 0.945 - - prolyl 4-hydroxylase subunit beta [Source:NCBI gene;Acc:374091]
35. CYP3A4 ENSGALG00000004436 75 0.945 - - - - - - - 0.945 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
36. SELP 28 0.943 - - - - - - - 0.943 - - selectin P, transcript variant X9
37. KLHL32 68 0.941 - - - - - - - 0.941 - - kelch like family member 32, transcript variant X3
38. RAB19 ENSGALG00000012850 155 0.94 - - - - - - - 0.940 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
39. MAT2A ENSGALG00000015366 17 0.939 - - - - - - - 0.939 - - methionine adenosyltransferase 2A, transcript variant X1
40. FBXL18 ENSGALG00000004611 97 0.937 - - - - - - - 0.937 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
41. C1QA ENSGALG00000021569 343 0.936 - - - - - - - 0.936 - - complement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]
42. BAAT ENSGALG00000040619 579 0.936 - - - - - - - 0.936 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
43. POLR1A ENSGALG00000038160 236 0.935 - - - - - - - 0.935 - - RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
44. OGN ENSGALG00000026736 223 0.933 - - - - - - - 0.933 - - osteoglycin [Source:NCBI gene;Acc:374039]
45. TMEM248 ENSGALG00000033954 248 0.933 - - - - - - - 0.933 - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
46. LANCL1 ENSGALG00000002921 571 0.931 - - - - - - - 0.931 - - LanC like 1 [Source:NCBI gene;Acc:424006]
47. KSR1 ENSGALG00000005685 78 0.93 - - - - - - - 0.930 - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
48. UGT8L ENSGALG00000005599 93 0.929 - - - - - - - 0.929 - - UDP glycosyltransferase 8-like
49. RBBP8NL ENSGALG00000045938 89 0.929 - - - - - - - 0.929 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
50. C4orf47 ENSGALG00000013287 44 0.925 - - - - - - - 0.925 - - chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
51. ENSGALG00000021106 ENSGALG00000021106 35 0.925 - - - - - - - 0.925 - -
52. DDB1 ENSGALG00000042333 275 0.921 - - - - - - - 0.921 - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
53. GLOD5 ENSGALG00000025991 17 0.919 - - - - - - - 0.919 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
54. STK24 ENSGALG00000016885 442 0.918 - - - - - - - 0.918 - - serine/threonine kinase 24 [Source:NCBI gene;Acc:418780]
55. NTNG2 ENSGALG00000003677 73 0.914 - - - - - - - 0.914 - - netrin G2 [Source:HGNC Symbol;Acc:HGNC:14288]
56. SERPINF2 ENSGALG00000002987 236 0.911 - - - - - - - 0.911 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
57. EREG ENSGALG00000010864 46 0.911 - - - - - - - 0.911 - - epiregulin [Source:NCBI gene;Acc:408036]
58. PRKAA1 ENSGALG00000014832 547 0.911 - - - - - - - 0.911 - - protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
59. CHAMP1 ENSGALG00000016813 508 0.91 - - - - - - - - 0.910 - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
60. CHRNA6 ENSGALG00000015382 31 0.908 - - - - - - - 0.908 - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
61. GJB1 ENSGALG00000005541 261 0.905 - - - - - - - 0.905 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
62. SLC6A13 ENSGALG00000012985 194 0.904 - - - - - - - 0.904 - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
63. ORC6 ENSGALG00000004342 454 0.903 - - - - - - - 0.903 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
64. ZNF335 ENSGALG00000041370 4740 0.902 - - - - - - - 0.902 - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
65. ENSGALG00000014825 ENSGALG00000014825 491 0.902 - - - - - - - 0.902 - -
66. CIDEA ENSGALG00000034500 405 0.901 - - - - - - - 0.901 - - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
67. TRUB1 ENSGALG00000009091 1005 0.899 - - - - - - - 0.899 - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
68. VDAC1 ENSGALG00000006503 864 0.899 - - - - - - - 0.899 - - voltage dependent anion channel 1 [Source:NCBI gene;Acc:416320]
69. LOC415478 ENSGALG00000021171 100 0.898 - - - - - - - 0.898 - - transmembrane protein 2-like, transcript variant X2
70. TLN1 ENSGALG00000002548 489 0.898 - - - - - - - - 0.898 - talin 1 [Source:NCBI gene;Acc:395194]
71. VWF ENSGALG00000017272 1012 0.897 - - - - - - - - 0.897 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
72. ENSGALG00000001886 ENSGALG00000001886 1024 0.895 - - - - - - - 0.895 - -
73. KLF8 ENSGALG00000007570 1651 0.895 - - - - - - - 0.895 - - Kruppel-like factor 8, transcript variant X6
74. DTX3L ENSGALG00000012075 399 0.894 - - - - - - - - 0.894 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
75. TNK2 ENSGALG00000027983 144 0.894 - - - - - - - 0.894 - - tyrosine kinase non receptor 2, transcript variant X7
76. MMD2 ENSGALG00000004530 167 0.894 - - - - - - - 0.894 - - monocyte to macrophage differentiation associated 2 [Source:HGNC Symbol;Acc:HGNC:30133]
77. CHD6 477 0.891 - - - - - - - 0.891 - - chromodomain helicase DNA binding protein 6, transcript variant X10
78. ES1ML2 ENSGALG00000007526 179 0.89 - - - - - - - 0.890 - - ES1 protein homolog, mitochondrial-like 2
79. DIO1 ENSGALG00000010736 87 0.889 - - - - - - - 0.889 - - iodothyronine deiodinase 1 [Source:NCBI gene;Acc:395940]
80. NOTCH2 ENSGALG00000002922 3272 0.889 - - - - - - - 0.889 - - notch 2 [Source:NCBI gene;Acc:374031]
81. RASSF8 ENSGALG00000014041 850 0.889 - - - - - - - 0.889 - - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
82. SMARCD3 ENSGALG00000043137 401 0.888 - - - - - - - 0.888 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
83. CYP20A1 ENSGALG00000008730 930 0.887 - - - - - - - 0.887 - - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
84. C5 ENSGALG00000001565 142 0.885 - - - - - - - 0.885 - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
85. GLB1L2 ENSGALG00000001604 4057 0.883 - - - - - - - 0.883 - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
86. C12ORF32 C12ORF32 768 0.881 - - - - - - - 0.881 - -
87. LGR5 ENSGALG00000010163 2931 0.878 - - - - - - - 0.878 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]
88. NR0B1 ENSGALG00000016287 481 0.877 - - - - - - - 0.877 - - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
89. MXRA8 ENSGALG00000001561 181 0.877 - - - - - - - 0.877 - - matrix remodeling associated 8 [Source:NCBI gene;Acc:395347]
90. FBXO32 ENSGALG00000041202 1066 0.874 - - - - - - - 0.874 - - F-box protein 32 [Source:NCBI gene;Acc:420343]
91. TRIM3 ENSGALG00000034004 110 0.874 - - - - - - - - 0.874 - tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
92. CTSB ENSGALG00000030016 177 0.873 - - - - - - - 0.873 - - cathepsin B [Source:NCBI gene;Acc:396329]
93. LRRC71 ENSGALG00000027351 695 0.873 - - - - - - - - 0.873 - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
94. TULP4 ENSGALG00000037377 563 0.873 - - - - - - - - 0.873 - tubby like protein 4 [Source:HGNC Symbol;Acc:HGNC:15530]
95. DAG1 ENSGALG00000037784 1012 0.872 - - - - - - - 0.872 - - dystroglycan 1 [Source:NCBI gene;Acc:100049058]
96. TRIP11 ENSGALG00000010763 3146 0.872 - - - - - - - - 0.872 - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
97. FCRL2 FCRL2 488 0.87 - - - - - - - 0.870 - -
98. C1orf159 ENSGALG00000027363 1672 0.87 - - - - - - - 0.870 - - chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]
99. IGFBP4 ENSGALG00000040672 608 0.868 - - - - - - - 0.868 - - insulin like growth factor binding protein 4 [Source:NCBI gene;Acc:374271]
100. COG1 ENSGALG00000029893 4309 0.866 - - - - - - - 0.866 - - component of oligomeric golgi complex 1 [Source:NCBI gene;Acc:417449]

There are 366 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA