Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IFT20

Gene Name Gene ID Reads Annotation
IFT20 ENSGALG00000005707 23973 intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]











Genes with expression patterns similar to IFT20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IFT20 ENSGALG00000005707 23973 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
2. LRPPRC ENSGALG00000009967 17091 1.736 - - - - 0.742 - 0.994 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
3. USPL1 ENSGALG00000017079 6263 1.728 - - - - - - 0.989 0.739 - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
4. DAPK3 ENSGALG00000037733 6215 0.994 - - - - - - 0.994 - - - death-associated protein kinase 3, transcript variant X2
5. RAP1B ENSGALG00000009927 26562 0.994 - - - - - - 0.994 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
6. UBE2L3 ENSGALG00000036739 21401 0.994 - - - - - - 0.994 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
7. MCM3 ENSGALG00000016676 16934 0.993 - - - - - - 0.993 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
8. HDAC8 ENSGALG00000004825 12066 0.992 - - - - - - 0.992 - - - histone deacetylase 8, transcript variant X2
9. ARHGAP32 ENSGALG00000043511 7916 0.992 - - - - - - 0.992 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
10. CCNYL1 ENSGALG00000008485 11958 0.992 - - - - - - 0.992 - - - cyclin Y like 1
11. RAB12 ENSGALG00000033608 14160 0.992 - - - - - - 0.992 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
12. SLC9A3R1 ENSGALG00000007650 13053 0.992 - - - - - - 0.992 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
13. EIF1B ENSGALG00000038646 9508 0.991 - - - - - - 0.991 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
14. MATR3 ENSGALG00000002478 12793 0.991 - - - - - - 0.991 - - - matrin 3 [Source:NCBI gene;Acc:373948]
15. CNOT6 ENSGALG00000034316 10496 0.99 - - - - - - 0.990 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
16. C9orf64 ENSGALG00000012589 6097 0.99 - - - - - - 0.990 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
17. WDHD1 ENSGALG00000012199 3570 0.99 - - - - - - 0.990 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
18. DHFR ENSGALG00000026757 18478 0.99 - - - - - - 0.990 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
19. FAT1 ENSGALG00000013579 6030 0.99 - - - - - - 0.990 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
20. FAM192A ENSGALG00000021473 10213 0.99 - - - - - - 0.990 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
21. GPC1 ENSGALG00000040316 13364 0.989 - - - - - - 0.989 - - - glypican 1 [Source:NCBI gene;Acc:424770]
22. TMEM18 ENSGALG00000028744 11779 0.989 - - - - - - 0.989 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
23. Sep-06 Sep-06 5961 0.989 - - - - - - 0.989 - - -
24. CXCL12 ENSGALG00000041346 4128 0.988 - - - - - - 0.988 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
25. EIF3D ENSGALG00000012529 40887 0.987 - - - - - - 0.987 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
26. ZEB1 ENSGALG00000007260 9277 0.987 - - - - - - 0.987 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
27. CORO1C ENSGALG00000004901 7055 0.987 - - - - - - 0.987 - - - coronin 1C [Source:NCBI gene;Acc:416893]
28. LRPAP1 ENSGALG00000015612 3526 0.986 - - - - - - 0.986 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
29. CTBPL ENSGALG00000007642 14238 0.986 - - - - - - 0.986 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
30. VSX1 ENSGALG00000037576 1517 0.985 - - - - - - 0.985 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
31. EFTUD2 ENSGALG00000000988 17913 0.985 - - - - - - 0.985 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
32. RNF141 ENSGALG00000029586 4962 0.985 - - - - - - 0.985 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
33. DNAJC7 ENSGALG00000042796 14597 0.985 - - - - - - 0.985 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
34. MCM6 ENSGALG00000012348 12523 0.984 - - - - - - 0.984 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
35. C15H12ORF49 C15H12ORF49 13250 0.983 - - - - - - 0.983 - - -
36. SMARCE1 ENSGALG00000003882 49063 0.983 - - - - - - 0.983 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
37. ZNF644 ENSGALG00000034253 28348 0.982 - - - - - - 0.982 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
38. CDCA4 ENSGALG00000011692 10381 0.98 - - - - - - 0.980 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
39. PPIG ENSGALG00000009839 24114 0.979 - - - - - - 0.979 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
40. INTS4 ENSGALG00000000091 5965 0.977 - - - - - - 0.977 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
41. HNRNPH3 ENSGALG00000003947 28724 0.977 - - - - - - 0.977 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
42. PDLIM4 ENSGALG00000039872 7823 0.972 - - - - - - 0.972 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
43. HNRNPM ENSGALG00000000377 40684 0.969 - - - - - - 0.969 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
44. C16ORF61 C16ORF61 2998 0.934 - - - - - - - 0.934 - -
45. KARS ENSGALG00000000907 51247 0.921 - - - - - - - 0.921 - - lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]
46. MAD2L2 ENSGALG00000004640 3971 0.921 - - - - - - - 0.921 - - MAD2 mitotic arrest deficient-like 2 (yeast) [Source:NCBI gene;Acc:419493]
47. TOMM20 ENSGALG00000035299 23431 0.898 - - - - - - - 0.898 - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
48. LUM ENSGALG00000011271 44020 0.848 - - - - - - 0.848 - - - lumican [Source:NCBI gene;Acc:417891]
49. RPL3 ENSGALG00000012172 118287 0.841 - - - - - - 0.841 - - - ribosomal protein L3 [Source:NCBI gene;Acc:418016]
50. SUB1 ENSGALG00000003248 56412 0.825 - - - - - - 0.825 - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
51. ACAA2 ENSGALG00000031142 29220 0.784 - - - - 0.784 - - - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
52. CLTA ENSGALG00000015326 26867 0.778 - - - - - - - 0.778 - - clathrin light chain A [Source:NCBI gene;Acc:427284]
53. PMM2 ENSGALG00000007326 8260 0.763 - - - - - - - 0.763 - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
54. DR1 ENSGALG00000005858 8016 0.762 - - - - - - - 0.762 - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
55. PDAP1 ENSGALG00000036552 28881 0.761 - - - - - - - 0.761 - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
56. TMEM128 ENSGALG00000014992 6567 0.761 - - - - - - - 0.761 - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
57. SCP2 ENSGALG00000010652 19563 0.761 - - - - - - - 0.761 - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
58. RWDD1 ENSGALG00000014953 9986 0.761 - - - - - - - 0.761 - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
59. NDUFA7 ENSGALG00000000629 14046 0.759 - - - - - - - 0.759 - - NADH:ubiquinone oxidoreductase subunit A7
60. DPP9 ENSGALG00000004200 4515 0.758 - - - - - - - 0.758 - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
61. NCKAP1 ENSGALG00000002750 22749 0.757 - - - - - - - 0.757 - - NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
62. CCDC101 CCDC101 9111 0.757 - - - - - - - 0.757 - -
63. GSTK1 ENSGALG00000014708 4687 0.755 - - - - - - - 0.755 - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
64. CHMP7 ENSGALG00000000409 8967 0.753 - - - - - - - 0.753 - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
65. WDR70 ENSGALG00000003708 5835 0.753 - - - - - - - 0.753 - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
66. DCN ENSGALG00000011274 4166 0.752 - - - - - - - 0.752 - - decorin [Source:NCBI gene;Acc:417892]
67. SEC23A_1 ENSGALG00000010150 14745 0.751 - - - - - - - 0.751 - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
68. SLC25A33 ENSGALG00000002519 4173 0.75 - - - - - - - 0.750 - - solute carrier family 25 member 33 [Source:HGNC Symbol;Acc:HGNC:29681]
69. CMIP ENSGALG00000038494 5016 0.749 - - - - - - - 0.749 - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
70. SNRNP25 ENSGALG00000026559 2097 0.748 - - - - - - - 0.748 - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
71. CSRNP1 ENSGALG00000027905 3141 0.748 - - - - - - - 0.748 - - cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
72. ORAI2 ENSGALG00000001837 2528 0.747 - - - - - - - 0.747 - - ORAI calcium release-activated calcium modulator 2 [Source:NCBI gene;Acc:417509]
73. MTFR1L ENSGALG00000000998 3457 0.746 - - - - - - - 0.746 - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
74. CHST10 ENSGALG00000016769 2472 0.746 - - - - - - - 0.746 - - carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:395206]
75. ECHDC1 ENSGALG00000014828 958 0.745 - - - - - - - 0.745 - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
76. APCDD1 ENSGALG00000000894 1482 0.744 - - - - - - - 0.744 - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
77. TCF15 ENSGALG00000026276 3646 0.744 - - - - - - - 0.744 - - transcription factor 15 [Source:NCBI gene;Acc:395788]
78. TRAPPC8 ENSGALG00000015157 4308 0.744 - - - - - - - 0.744 - - trafficking protein particle complex 8, transcript variant X5
79. ENSGALG00000026592 ENSGALG00000026592 4331 0.744 - - - - - - - 0.744 - -
80. HIAT1 HIAT1 447 0.743 - - - - - - - 0.743 - -
81. KIF23 ENSGALG00000008095 9919 0.736 - - - - - - - 0.736 - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
82. EIF4E ENSGALG00000042112 27720 0.736 - - - - - - - 0.736 - - eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:HGNC:3287]
83. DTWD2 ENSGALG00000002250 1604 0.735 - - - - - - - - - 0.735 DTW domain containing 2 [Source:NCBI gene;Acc:427386]
84. RPLP2 ENSGALG00000034811 152607 0.732 - - - - 0.732 - - - - - ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
85. NUDT7 ENSGALG00000034395 7396 0.731 - - - - - - 0.731 - - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
86. DDX5 ENSGALG00000003532 75471 0.729 - - - - 0.729 - - - - - DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
87. XPO5 ENSGALG00000010341 24765 0.725 - - - - 0.725 - - - - - exportin 5 [Source:NCBI gene;Acc:421450]
88. MDFIC ENSGALG00000026838 3881 0.725 - - - - - - - - 0.725 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
89. CASP8AP2 ENSGALG00000015611 5657 0.725 - - - - - - - 0.725 - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
90. TF ENSGALG00000006453 14007 0.723 - - - - - - - 0.723 - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
91. CTSO ENSGALG00000009373 4186 0.719 - - - - - - - - - 0.719 cathepsin O [Source:NCBI gene;Acc:422410]
92. LLPH ENSGALG00000019358 20976 0.718 - - - - 0.718 - - - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
93. POLR2D ENSGALG00000002057 14548 0.716 - - - - 0.716 - - - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
94. HSPE1 ENSGALG00000009070 87567 0.715 - - - - 0.715 - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
95. AFG3L2 ENSGALG00000013853 1138 0.713 - - - - - - - - 0.713 - AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
96. OTUD6B ENSGALG00000041337 15657 0.713 - - - - 0.713 - - - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
97. LZIC ENSGALG00000002616 9052 0.712 - - - - - - - 0.712 - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
98. COX17 ENSGALG00000014981 5646 0.711 - - - - - - - - - 0.711 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
99. DDX19B ENSGALG00000039967 49600 0.709 - - - - - - - 0.709 - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
100. ATP6V0A1 ENSGALG00000003256 4408 0.708 - - - - - - - - - 0.708 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]

There are 4 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA