Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IFRD1

Gene Name Gene ID Reads Annotation
IFRD1 ENSGALG00000009448 8865 interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]











Genes with expression patterns similar to IFRD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IFRD1 ENSGALG00000009448 8865 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
2. DHX38 ENSGALG00000000787 6913 1.585 - - - - - 0.793 0.792 - - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
3. PAPSS1 ENSGALG00000010542 5631 1.562 - - - - - - 0.825 0.737 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
4. INCENP ENSGALG00000007537 16617 1.538 - - - - - - 0.831 0.707 - - inner centromere protein [Source:NCBI gene;Acc:396270]
5. FTSJ3 ENSGALG00000032993 8929 1.52 - - - - - - 0.731 0.789 - - FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
6. DCPS ENSGALG00000031143 10191 1.52 - - - - - - 0.752 0.768 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
7. TM4SF18 4553 1.516 - - - - - - 0.770 0.746 - - transmembrane 4 L six family member 18, transcript variant X2
8. FAM177A1 ENSGALG00000010046 4318 1.511 - - - - - - 0.786 0.725 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
9. ATR ENSGALG00000002663 4626 1.499 - - - 0.719 - - 0.780 - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
10. MPI ENSGALG00000029296 11781 1.495 - - - - - - 0.755 0.740 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
11. GNAI2 ENSGALG00000035645 9535 1.494 - - - - - - 0.711 0.783 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
12. CTDSPL2 ENSGALG00000008199 3534 1.49 - - - - - - 0.773 0.717 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
13. BLMH ENSGALG00000004259 36907 1.487 - - - - - - 0.747 0.740 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
14. RRP36 ENSGALG00000028056 7560 1.484 - - - - - - 0.777 0.707 - - ribosomal RNA processing 36
15. XPO4 ENSGALG00000017132 2538 1.478 - - - - - - 0.742 0.736 - - exportin 4 [Source:NCBI gene;Acc:428081]
16. MYC ENSGALG00000033631 16949 1.477 - - - - - - 0.700 0.777 - - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
17. HMGB3 ENSGALG00000009071 12011 1.476 - - - - - - 0.745 0.731 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
18. KLHL21 ENSGALG00000035211 6145 1.474 - - - - - - 0.728 0.746 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
19. SASS6 ENSGALG00000005302 4029 1.463 - - - - - - 0.726 0.737 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
20. JMJD6 ENSGALG00000001802 5169 1.46 - - - - - - 0.709 0.751 - - jumonji domain containing 6 [Source:NCBI gene;Acc:417355]
21. KDM3B ENSGALG00000007663 7189 1.46 - - - - - - 0.736 0.724 - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
22. C11H16ORF80 C11H16ORF80 18673 1.458 - - - - - - 0.722 0.736 - -
23. UNC119B ENSGALG00000026722 8622 1.455 - - - - - - 0.705 0.750 - - unc-119 lipid binding chaperone B [Source:HGNC Symbol;Acc:HGNC:16488]
24. STRN3 ENSGALG00000040464 9045 1.453 - - - - - - 0.727 0.726 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
25. DNAJA4 ENSGALG00000036850 6847 1.45 - - - - - - 0.719 0.731 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
26. CRIPT ENSGALG00000010014 4311 1.449 - - - - - - 0.723 0.726 - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
27. SF3B3 ENSGALG00000002531 19397 1.448 - - - - - - 0.714 0.734 - - splicing factor 3b subunit 3, transcript variant X2
28. TMCC2 ENSGALG00000034281 3458 1.441 - - - - - - 0.720 0.721 - - transmembrane and coiled-coil domain family 2 [Source:HGNC Symbol;Acc:HGNC:24239]
29. CFDP1 ENSGALG00000002853 8562 1.439 - - - - - - 0.714 0.725 - - craniofacial development protein 1 [Source:NCBI gene;Acc:374073]
30. MRPL2 ENSGALG00000008597 16500 1.439 - - - - - - 0.717 0.722 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
31. DAD1 ENSGALG00000035626 32604 1.439 - - - - - - 0.707 0.732 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
32. TRAPPC6B ENSGALG00000010157 7567 1.427 - - - - - - 0.703 0.724 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
33. KTN1 ENSGALG00000012137 4058 1.425 - - - - - - 0.701 0.724 - - kinectin 1 [Source:NCBI gene;Acc:396335]
34. C4orf27 C4orf27 16724 1.424 - - - - - - 0.720 0.704 - -
35. ZC3H18 2569 1.419 - - - - - - 0.717 0.702 - - zinc finger CCCH-type containing 18, transcript variant X3
36. GULP1 4107 1.416 - - - - - - 0.707 0.709 - - GULP, engulfment adaptor PTB domain containing 1, transcript variant X13
37. NUP50 ENSGALG00000014222 11743 0.884 - - - - - - 0.884 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
38. RNPS1 ENSGALG00000009288 13588 0.867 - - - - - - 0.867 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
39. KLHDC4 ENSGALG00000037315 9828 0.863 - - - - - - 0.863 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
40. PRPSAP2 ENSGALG00000005064 5549 0.858 - - - - - - 0.858 - - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
41. NEK6 ENSGALG00000001118 20333 0.857 - - - - - - 0.857 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
42. RUVBL1 ENSGALG00000005931 9379 0.853 - - - - - - 0.853 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
43. AZIN1 ENSGALG00000029295 11085 0.852 - - - - - - - 0.852 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
44. BIRC6 ENSGALG00000010541 7999 0.851 - - - - - - 0.851 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
45. CASK ENSGALG00000042400 8485 0.851 - - - - - - 0.851 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
46. HMGXB4 ENSGALG00000044768 6005 0.844 - - - - - - - 0.844 - - HMG-box containing 4 [Source:HGNC Symbol;Acc:HGNC:5003]
47. RABGGTB ENSGALG00000011388 11654 0.843 - - - - - - 0.843 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
48. GLI3 ENSGALG00000040266 9981 0.838 - - - - - - 0.838 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
49. ENSGALG00000004283 ENSGALG00000004283 4771 0.836 - - - - - - - 0.836 - -
50. BSG ENSGALG00000001328 37947 0.835 - - - - - - 0.835 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
51. SNX7 ENSGALG00000005478 4736 0.835 - - - - - - 0.835 - - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
52. PAXIP1 ENSGALG00000036064 3120 0.834 - - - - - - 0.834 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
53. DGCR2 ENSGALG00000005891 8405 0.834 - - - - - - 0.834 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
54. RIOK3 ENSGALG00000015004 4249 0.833 - - - - - - 0.833 - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
55. WDR45B ENSGALG00000001563 5870 0.832 - - - - - - 0.832 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
56. ZNF593 ENSGALG00000000542 79105 0.831 - - - - - - 0.831 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
57. ENSGALG00000017396 ENSGALG00000017396 9028 0.831 - - - - - - 0.831 - - -
58. ATG3 ENSGALG00000015204 11277 0.829 - - - - - - 0.829 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
59. WDR43 ENSGALG00000032529 12235 0.827 - - - - - - 0.827 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
60. UBE2B ENSGALG00000032664 6069 0.826 - - - - - - 0.826 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
61. ANAPC1 ENSGALG00000008254 2519 0.826 - - - - - - 0.826 - - - anaphase promoting complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:19988]
62. DCAF7 ENSGALG00000000510 8681 0.826 - - - - - - 0.826 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
63. TTC37 ENSGALG00000014670 5715 0.826 - - - - - - 0.826 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
64. ERCC3 ENSGALG00000011515 3133 0.825 - - - - - - - 0.825 - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
65. TMEM167A ENSGALG00000027332 13862 0.825 - - - - - - 0.825 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
66. CMPK CMPK 9569 0.824 - - - - - - 0.824 - - -
67. NDUFA12 ENSGALG00000011325 19807 0.822 - - - - - - 0.822 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
68. PSMD13 ENSGALG00000043684 14720 0.821 - - - - - - - 0.821 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
69. C6ORF162 C6ORF162 4217 0.821 - - - - - - 0.821 - - -
70. TMTC2 ENSGALG00000010975 7040 0.821 - - - - - - 0.821 - - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
71. FCF1 ENSGALG00000010275 24928 0.821 - - - - - - 0.821 - - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
72. TOR1AIP1 ENSGALG00000029238 5843 0.821 - - - - - - 0.821 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
73. LIMD2 ENSGALG00000000529 30617 0.82 - - - - - - 0.820 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
74. CLNS1A ENSGALG00000008574 25675 0.82 - - - - - - 0.820 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
75. PDDC1 5179 0.819 - - - - - - 0.819 - - - Parkinson disease 7 domain containing 1, transcript variant X6
76. VBP1 VBP1 14482 0.819 - - - - - - 0.819 - - -
77. CDC45 ENSGALG00000001616 8432 0.819 - - - - - - 0.819 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
78. NASP ENSGALG00000010255 28423 0.818 - - - - - - 0.818 - - - nuclear autoantigenic sperm protein, transcript variant X3
79. TAX1BP1 ENSGALG00000042822 7728 0.818 - - - - - - 0.818 - - - Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
80. TAF15 ENSGALG00000002060 12320 0.818 - - - - - - 0.818 - - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
81. DDX19B ENSGALG00000039967 49600 0.818 - - - - - - 0.818 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
82. CSE1L ENSGALG00000004707 20653 0.817 - - - - - - 0.817 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
83. ARFIP1 ENSGALG00000041361 7351 0.817 - - - - - - - 0.817 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
84. DERL1 ENSGALG00000033950 15074 0.815 - - - - - - 0.815 - - - derlin 1 [Source:NCBI gene;Acc:420350]
85. YWHAZ ENSGALG00000031387 84985 0.815 - - - - - - 0.815 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
86. LOC776067 ENSGALG00000016808 9164 0.815 - - - - - - 0.815 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
87. GGA.31975 GGA.31975 8825 0.814 - - - - - - 0.814 - - -
88. GPALPP1 ENSGALG00000031567 4221 0.813 - - - - - - 0.813 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
89. UTP11L UTP11L 11927 0.813 - - - - - - 0.813 - - -
90. HARS ENSGALG00000035080 11602 0.813 - - - - - - 0.813 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
91. DKC1 ENSGALG00000005054 30350 0.811 - - - - - - 0.811 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
92. DNAL4 ENSGALG00000043451 4469 0.811 - - - - - - 0.811 - - - dynein axonemal light chain 4 [Source:NCBI gene;Acc:418019]
93. ILF2 ENSGALG00000011570 23050 0.81 - - - - - - 0.810 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
94. ACTR2 ENSGALG00000008779 17812 0.81 - - - - - - 0.810 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
95. SKAP2 ENSGALG00000030081 13746 0.809 - - - - - - 0.809 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
96. MTFR2 ENSGALG00000019967 4436 0.809 - - - - - - 0.809 - - - mitochondrial fission regulator 2, transcript variant X1
97. ERLIN2 ENSGALG00000003092 18251 0.809 - - - - - - - 0.809 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
98. HSPA4 ENSGALG00000040882 20966 0.809 - - - - - - 0.809 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
99. SDHD ENSGALG00000007878 25129 0.809 - - - - - - 0.809 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
100. PPP1R2 ENSGALG00000029789 11594 0.808 - - - - - - 0.808 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]

There are 694 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA