Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for IDH3A

Gene Name Gene ID Reads Annotation
IDH3A ENSGALG00000037401 668 isocitrate dehydrogenase 3 (NAD(+)) alpha [Source:NCBI gene;Acc:415362]











Genes with expression patterns similar to IDH3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IDH3A ENSGALG00000037401 668 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 isocitrate dehydrogenase 3 (NAD(+)) alpha [Source:NCBI gene;Acc:415362]
2. ENSGALG00000024018 ENSGALG00000024018 37 0.831 - - - - 0.831 - - - - -
3. CYR61 ENSGALG00000008661 43 0.802 - - - - 0.802 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
4. PHC2 62 0.802 - - - - 0.802 - - - - - polyhomeotic homolog 2
5. TJP3 ENSGALG00000000748 45 0.799 - - - - 0.799 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
6. SDCCAG3 1208 0.798 - - - - 0.798 - - - - - serologically defined colon cancer antigen 3
7. MCAM ENSGALG00000030027 26 0.796 - - - - 0.796 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
8. MARVELD3 ENSGALG00000012886 155 0.794 - - - - 0.794 - - - - - MARVEL domain containing 3
9. ENSGALG00000025953 ENSGALG00000025953 65 0.79 - - - - 0.790 - - - - -
10. TDRD12 ENSGALG00000004704 19 0.784 - - - - 0.784 - - - - - tudor domain containing 12, transcript variant X3
11. GRIN1 ENSGALG00000008898 18 0.782 - - - - 0.782 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
12. TMCC1 ENSGALG00000008487 65 0.782 - - - - 0.782 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
13. C10orf67 15 0.78 - - - - 0.780 - - - - - chromosome 10 open reading frame 67, transcript variant X2
14. SYT10 ENSGALG00000012911 17 0.779 - - - - 0.779 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
15. LMTK2 ENSGALG00000003479 46 0.779 - - - - 0.779 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
16. IRG1 IRG1 21 0.778 - - - - 0.778 - - - - -
17. MUL1 ENSGALG00000042761 1312 0.775 - - - - 0.775 - - - - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
18. INPP4B ENSGALG00000009880 358 0.774 - - - - - - 0.774 - - - inositol polyphosphate-4-phosphatase type II B [Source:HGNC Symbol;Acc:HGNC:6075]
19. ZCCHC9 ENSGALG00000015603 3118 0.77 - - - - - 0.770 - - - - zinc finger CCHC-type containing 9 [Source:HGNC Symbol;Acc:HGNC:25424]
20. HTR7_1 ENSGALG00000040549 86 0.77 - - - - - 0.770 - - - - 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
21. LRRC34 ENSGALG00000009402 3 0.768 - - - - - 0.768 - - - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
22. DEAF1 ENSGALG00000034225 439 0.766 - - - - 0.766 - - - - - DEAF1, transcription factor [Source:NCBI gene;Acc:423017]
23. LIMK1 ENSGALG00000001076 1931 0.766 - - - - 0.766 - - - - - LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
24. SLC39A8 ENSGALG00000012298 9 0.765 - - - - - 0.765 - - - - solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
25. ENSGALG00000025801 ENSGALG00000025801 5 0.765 - - - - - 0.765 - - - -
26. FANCD2 ENSGALG00000003720 634 0.765 - - - - - - - - - 0.765 Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]
27. ENSGALG00000027597 ENSGALG00000027597 13 0.765 - - - - - 0.765 - - - -
28. TDRKH ENSGALG00000031812 1 0.765 - - - - - 0.765 - - - - tudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]
29. ESRRB ENSGALG00000041775 43 0.765 - - - - - 0.765 - - - - estrogen related receptor beta [Source:HGNC Symbol;Acc:HGNC:3473]
30. SCTR ENSGALG00000012106 49 0.765 - - - - - 0.765 - - - - secretin receptor [Source:NCBI gene;Acc:770943]
31. RNF6 ENSGALG00000017105 11 0.765 - - - - - 0.765 - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
32. CYP11A1 ENSGALG00000034982 1 0.765 - - - - - 0.765 - - - - cytochrome P450 family 11 subfamily A member 1 [Source:NCBI gene;Acc:414838]
33. ADAMTSL3 ENSGALG00000006104 57 0.765 - - - - - 0.765 - - - - ADAMTS like 3 [Source:HGNC Symbol;Acc:HGNC:14633]
34. NOX5 ENSGALG00000008063 19 0.765 - - - - - 0.765 - - - - NADPH oxidase 5 [Source:NCBI gene;Acc:415565]
35. ISPD ENSGALG00000010795 7 0.765 - - - - - 0.765 - - - - isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
36. IFNAR1 ENSGALG00000030363 22 0.765 - - - - - 0.765 - - - - interferon alpha and beta receptor subunit 1 [Source:NCBI gene;Acc:395665]
37. BTBD3 ENSGALG00000009028 45 0.765 - - - - - 0.765 - - - - BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15854]
38. MFSD8 ENSGALG00000010199 11 0.765 - - - - - 0.765 - - - - major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]
39. YTHDF3 ENSGALG00000039774 170 0.765 - - - - - 0.765 - - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
40. MAPKBP1 2 0.765 - - - - - 0.765 - - - - mitogen-activated protein kinase binding protein 1, transcript variant X3
41. SFMBT1 ENSGALG00000001753 10 0.765 - - - - - 0.765 - - - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
42. ENSGALG00000026109 ENSGALG00000026109 2 0.765 - - - - - 0.765 - - - -
43. CEP89 ENSGALG00000004756 282 0.765 - - - - 0.765 - - - - - centrosomal protein 89 [Source:HGNC Symbol;Acc:HGNC:25907]
44. CYTH4 ENSGALG00000012454 12 0.765 - - - - - 0.765 - - - - cytohesin 4 [Source:NCBI gene;Acc:418043]
45. XG ENSGALG00000029002 17 0.765 - - - - - 0.765 - - - - Xg blood group
46. DOLK ENSGALG00000026007 6 0.765 - - - - - 0.765 - - - - dolichol kinase [Source:NCBI gene;Acc:417199]
47. GPR22 ENSGALG00000008032 5 0.765 - - - - - 0.765 - - - - G protein-coupled receptor 22, transcript variant X1
48. SLC2A1 ENSGALG00000004889 10 0.765 - - - - - 0.765 - - - - solute carrier family 2 member 1 [Source:NCBI gene;Acc:396130]
49. SNORD65 SNORD65 3 0.765 - - - - - 0.765 - - - -
50. ENSGALG00000011658 ENSGALG00000011658 1 0.765 - - - - - 0.765 - - - -
51. GJA10 ENSGALG00000015606 1 0.765 - - - - - 0.765 - - - - gap junction protein, alpha 10, 62kDa
52. CCSER1 ENSGALG00000039674 14 0.765 - - - - - 0.765 - - - - coiled-coil serine rich protein 1, transcript variant X3
53. gga-mir-1647 ENSGALG00000025382 4 0.765 - - - - - 0.765 - - - - gga-mir-1647 [Source:miRBase;Acc:MI0007379]
54. CCDC180 109 0.759 - - - - 0.759 - - - - - coiled-coil domain containing 180
55. RYR2 ENSGALG00000010812 95 0.757 - - - - - 0.757 - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
56. CCDC39 ENSGALG00000021855 23 0.757 - - - - 0.757 - - - - - coiled-coil domain containing 39
57. FAM19A1 32 0.757 - - - - - 0.757 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
58. CRAT ENSGALG00000037443 78 0.756 - - - - 0.756 - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
59. NT5C1A ENSGALG00000003816 100 0.755 - - - - 0.755 - - - - - 5'-nucleotidase, cytosolic IA [Source:HGNC Symbol;Acc:HGNC:17819]
60. FAM208B 24 0.755 - - - - 0.755 - - - - - family with sequence similarity 208 member B, transcript variant X3
61. ENSGALG00000002020 ENSGALG00000002020 183 0.754 - - - - - 0.754 - - - -
62. LARP4B ENSGALG00000006672 57 0.754 - - - - 0.754 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
63. ENPP1 ENSGALG00000034397 278 0.751 - - - - - - 0.751 - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:3356]
64. GUF1 ENSGALG00000014217 211 0.75 - - - - 0.750 - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
65. MAP3K21 ENSGALG00000011008 54 0.749 - - - - 0.749 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
66. FLNB ENSGALG00000005678 68 0.747 - - - - - 0.747 - - - - filamin B [Source:NCBI gene;Acc:378913]
67. ENSGALG00000027412 ENSGALG00000027412 202 0.747 - - - - - 0.747 - - - -
68. ERN2 ENSGALG00000027592 186 0.746 - - - - 0.746 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
69. SRRD ENSGALG00000005614 234 0.744 - - - - - - - - - 0.744 SRR1 domain containing [Source:NCBI gene;Acc:416908]
70. RTDR1 RTDR1 104 0.744 - - - - 0.744 - - - - -
71. POLR2K ENSGALG00000036019 8962 0.743 - - - - - 0.743 - - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
72. BKJ ENSGALG00000030478, ENSGALG00000031115, ENSGALG00000032838, ENSGALG00000035763, ENSGALG00000038477, ENSGALG00000039526, ENSGALG00000041545 14 0.743 - - - - - 0.743 - - - - beta-keratin related protein, transcript variant X1
73. ENSGALG00000004223 ENSGALG00000004223 7 0.743 - - - - - 0.743 - - - -
74. ST3GAL3 ENSGALG00000010083 935 0.743 - - - - - - - 0.743 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:NCBI gene;Acc:424572]
75. AANAT ENSGALG00000001955 23 0.742 - - - - 0.742 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
76. CNP ENSGALG00000003457 191 0.742 - - - - 0.742 - - - - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:NCBI gene;Acc:395921]
77. HSF3 ENSGALG00000040662 140 0.739 - - - - 0.739 - - - - - Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
78. TMEM164 ENSGALG00000008076 734 0.738 - - - - 0.738 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
79. CA3 CA3 200 0.736 - - - - - 0.736 - - - -
80. SLC2A3 SLC2A3 527 0.735 - - - - - - - - 0.735 -
81. LEPREL2 LEPREL2 2046 0.734 - - - - 0.734 - - - - -
82. NHS ENSGALG00000016543 11 0.733 - - - - - 0.733 - - - - NHS actin remodeling regulator [Source:HGNC Symbol;Acc:HGNC:7820]
83. SDR42E1 ENSGALG00000005456 586 0.731 - - - - 0.731 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
84. GLB1L ENSGALG00000011328 223 0.73 - - - - 0.730 - - - - - galactosidase beta 1 like [Source:HGNC Symbol;Acc:HGNC:28129]
85. HOMER3 ENSGALG00000003058, ENSGALG00000003074 1571 0.729 - - - - 0.729 - - - - - homer scaffolding protein 3, transcript variant X4
86. C3orf14 ENSGALG00000007182 758 0.727 - - - - - - - 0.727 - - chromosome 3 open reading frame 14 [Source:HGNC Symbol;Acc:HGNC:25024]
87. C14orf166B C14orf166B 4 0.723 - - - - - 0.723 - - - -
88. KIAA1549L ENSGALG00000012020 33 0.723 - - - - - 0.723 - - - - KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
89. KLRD1 ENSGALG00000014722 27 0.723 - - - - - 0.723 - - - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
90. NIFK ENSGALG00000011650 14990 0.722 - - - - - 0.722 - - - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
91. FRS2 ENSGALG00000009966 63 0.721 - - - - 0.721 - - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
92. SETD1B ENSGALG00000004324 2897 0.721 - - - - - - - - - 0.721 SET domain containing 1B [Source:NCBI gene;Acc:416851]
93. REEP5 ENSGALG00000023157 6282 0.721 - - - - - - - 0.721 - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
94. TLR1LB TLR1LB 65 0.721 - - - - - 0.721 - - - -
95. DERL3 ENSGALG00000005994 1499 0.72 - - - - - - 0.720 - - - derlin 3 [Source:NCBI gene;Acc:416934]
96. DINB1 DINB1 113 0.719 - - - - 0.719 - - - - -
97. SEC24B ENSGALG00000035482 3430 0.716 - - - - 0.716 - - - - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
98. ARPP21 ENSGALG00000043240 2403 0.712 - - - - - - - 0.712 - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
99. LGALSL ENSGALG00000027096 390 0.711 - - - - 0.711 - - - - - galectin like [Source:NCBI gene;Acc:421278]
100. F13A1 ENSGALG00000012802 16 0.71 - - - - - 0.710 - - - - coagulation factor XIII A chain [Source:NCBI gene;Acc:395420]

There are 14 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA