Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for IBA57

Gene Name Gene ID Reads Annotation
IBA57 ENSGALG00000005328 4362 IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]











Genes with expression patterns similar to IBA57

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. IBA57 ENSGALG00000005328 4362 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
2. NGFR ENSGALG00000035950 13452 1.809 - - - - 0.820 - - 0.989 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
3. WBP4 ENSGALG00000016949 5858 1.762 - - - - 0.777 - - 0.985 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
4. INCENP ENSGALG00000007537 16617 1.711 - - - - 0.982 - 0.729 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
5. EPFIP1L ENSGALG00000007683 18050 1.711 - - - - 0.961 - 0.750 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
6. XRN2 ENSGALG00000008372 22164 1.61 - - - - 0.907 - 0.703 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
7. VHL ENSGALG00000028009 25009 1.608 - - - - 0.866 - - 0.742 - - von Hippel-Lindau tumor suppressor, transcript variant X1
8. CIR1 ENSGALG00000014276 7189 1.563 - - - - - - 0.716 0.847 - - corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
9. RFC5 ENSGALG00000026517 26113 1.558 - - - - - - 0.729 0.829 - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
10. PSMB2 ENSGALG00000026421 51885 1.54 - - - - 0.810 - 0.730 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
11. LOC776067 ENSGALG00000016808 9164 1.536 - - - - - - 0.706 0.830 - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
12. GOT1 ENSGALG00000007484 21664 1.533 - - - - - - 0.722 0.811 - - glutamic-oxaloacetic transaminase 1 [Source:NCBI gene;Acc:396261]
13. COX5A ENSGALG00000014121 55281 1.527 - - - - 0.823 - 0.704 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
14. HTRA3 ENSGALG00000034673 512 0.997 - - - - 0.997 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
15. EPB41L1 ENSGALG00000034171 3616 0.997 - - - - 0.997 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
16. PPAPDC1B PPAPDC1B 6698 0.997 - - - - 0.997 - - - - -
17. MED1 ENSGALG00000001708 9556 0.996 - - - - 0.996 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
18. WHSC1L1 4065 0.996 - - - - 0.996 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
19. RNF113A ENSGALG00000000538 3985 0.996 - - - - 0.996 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
20. gga-mir-6584 ENSGALG00000028834 1481 0.996 - - - - 0.996 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
21. ABCC1 ENSGALG00000006646 2596 0.995 - - - - 0.995 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
22. MYEOV2 MYEOV2 5155 0.995 - - - - 0.995 - - - - -
23. MRPL46 ENSGALG00000006782 5033 0.995 - - - - 0.995 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
24. MAP1B ENSGALG00000014999 6288 0.995 - - - - 0.995 - - - - - microtubule associated protein 1B
25. NDST2 ENSGALG00000005107 4224 0.995 - - - - 0.995 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
26. RAE1 ENSGALG00000007653 8930 0.995 - - - - 0.995 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
27. TBC1D7 ENSGALG00000012731 4891 0.994 - - - - 0.994 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
28. AGPAT3 ENSGALG00000031932 6903 0.994 - - - - 0.994 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
29. SEC61A2 ENSGALG00000036300 4235 0.994 - - - - 0.994 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
30. HYOU1 ENSGALG00000007659 3555 0.994 - - - - 0.994 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
31. TMEM39B ENSGALG00000003287 4125 0.994 - - - - 0.994 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
32. NOL6 ENSGALG00000030730 7191 0.994 - - - - 0.994 - - - - - nucleolar protein 6
33. BCL9 ENSGALG00000037655 4620 0.994 - - - - 0.994 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
34. MRPL22 ENSGALG00000003919 2760 0.994 - - - - 0.994 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
35. PHKA1 ENSGALG00000004801 2510 0.993 - - - - 0.993 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
36. TBRG4 ENSGALG00000038102 9269 0.993 - - - - 0.993 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
37. C15H12ORF49 C15H12ORF49 13250 0.993 - - - - 0.993 - - - - -
38. USP1 ENSGALG00000010957 8297 0.993 - - - - 0.993 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
39. CCDC59 ENSGALG00000028648 9272 0.993 - - - - 0.993 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
40. HMGB3 ENSGALG00000009071 12011 0.993 - - - - 0.993 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
41. DNAJC2 ENSGALG00000008249 28064 0.992 - - - - 0.992 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
42. SENP2 ENSGALG00000031128 1162 0.992 - - - - - - - 0.992 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
43. TNPO3 ENSGALG00000039420 5178 0.992 - - - - 0.992 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
44. KCTD9 ENSGALG00000000275 3455 0.992 - - - - 0.992 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
45. CCNI ENSGALG00000011457 3203 0.991 - - - - - - - 0.991 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
46. VPS8 ENSGALG00000006704 5419 0.991 - - - - 0.991 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
47. RAB21 ENSGALG00000010183 7718 0.991 - - - - 0.991 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
48. TRIM33 ENSGALG00000001976 7404 0.991 - - - - 0.991 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
49. RILPL2 ENSGALG00000003321 5632 0.991 - - - - 0.991 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
50. LRRC42 ENSGALG00000010743 384 0.99 - - - - - - - 0.990 - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
51. GMFB ENSGALG00000012208 894 0.99 - - - - - - - 0.990 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
52. KIF3B ENSGALG00000006604 2968 0.99 - - - - - - - 0.990 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
53. MRPS11 ENSGALG00000006777 16009 0.99 - - - - 0.990 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
54. BIN1 ENSGALG00000011541 2273 0.99 - - - - - - - 0.990 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
55. C16orf93 C16orf93 3351 0.99 - - - - - - - 0.990 - -
56. THBS1 ENSGALG00000009626 3521 0.99 - - - - 0.990 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
57. N4BP2L1 ENSGALG00000017072 1371 0.99 - - - - - - - 0.990 - - NEDD4 binding protein 2 like 1, transcript variant X2
58. TMEM18 ENSGALG00000028744 11779 0.99 - - - - 0.990 - - - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
59. CLEC3B ENSGALG00000030969 363 0.99 - - - - - - - 0.990 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
60. PRKAG2 ENSGALG00000006219 504 0.989 - - - - - - - 0.989 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
61. CENPE ENSGALG00000013208 12337 0.989 - - - - 0.989 - - - - - centromere protein E, transcript variant X4
62. C7H2ORF76 ENSGALG00000012113 1947 0.989 - - - - - - - 0.989 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
63. LUC7L2 ENSGALG00000036238 11817 0.989 - - - - 0.989 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
64. LMO4 ENSGALG00000006252 3686 0.989 - - - - - - - 0.989 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
65. SZT2 ENSGALG00000028561 255 0.989 - - - - - - - 0.989 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
66. gga-mir-6681 ENSGALG00000027840 546 0.989 - - - - - - - 0.989 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
67. SPG21 ENSGALG00000007262 8050 0.989 - - - - 0.989 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
68. xcc-b100_1894L ENSGALG00000007564 462 0.989 - - - - - - - 0.989 - - UPF0061 protein xcc-b100_1894-like
69. OPTC ENSGALG00000003554 3698 0.989 - - - - 0.989 - - - - - opticin [Source:NCBI gene;Acc:395130]
70. ENSGALG00000016701 ENSGALG00000016701 418 0.989 - - - - - - - 0.989 - -
71. RFX3 ENSGALG00000010179 305 0.988 - - - - - - - 0.988 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
72. ZNF148 ENSGALG00000012049 365 0.988 - - - - - - - 0.988 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
73. ENSGALG00000025773 ENSGALG00000025773 977 0.988 - - - - - - - 0.988 - -
74. ENSGALG00000026309 ENSGALG00000026309 360 0.988 - - - - - - - 0.988 - -
75. AGO1 ENSGALG00000002249 125 0.988 - - - - - - - 0.988 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
76. CHGA ENSGALG00000010820 1028 0.988 - - - - - - - 0.988 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
77. C4orf27 C4orf27 16724 0.988 - - - - 0.988 - - - - -
78. NSG1 ENSGALG00000015010 5829 0.988 - - - - 0.988 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
79. FRYL ENSGALG00000014103 314 0.988 - - - - - - - 0.988 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
80. TBC1D19 ENSGALG00000029673 1868 0.988 - - - - - - - 0.988 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
81. M6PR ENSGALG00000031681 9442 0.988 - - - - 0.988 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
82. ENSGALG00000021835 ENSGALG00000021835 424 0.988 - - - - - - - 0.988 - -
83. SLC37A4 ENSGALG00000007716 2263 0.988 - - - - - - - 0.988 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
84. SIAH2 ENSGALG00000010395 2126 0.987 - - - - - - - 0.987 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
85. GPR155 ENSGALG00000014209 1281 0.987 - - - - - - - 0.987 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
86. ZC3H11A ENSGALG00000000541 2712 0.987 - - - - - - - 0.987 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
87. COQ5 ENSGALG00000007185 5614 0.987 - - - - - - - 0.987 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
88. MORN4 ENSGALG00000006149 7772 0.987 - - - - 0.987 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
89. UQCRC2 ENSGALG00000002490 23477 0.987 - - - - 0.987 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
90. ETF1 ENSGALG00000002262 14560 0.987 - - - - 0.987 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
91. CDC37L1 ENSGALG00000014448 2283 0.987 - - - - - - - 0.987 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
92. GHR_1 ENSGALG00000014855 198 0.987 - - - - - - - 0.987 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
93. PNPT1 ENSGALG00000043545 1306 0.987 - - - - - - - 0.987 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
94. TBC1D16 ENSGALG00000007054 2324 0.986 - - - - - - - 0.986 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
95. SAMM50 ENSGALG00000014194 20437 0.986 - - - - 0.986 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
96. MAN1A1 ENSGALG00000014878 1061 0.986 - - - - - - - 0.986 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
97. ESRP2 ENSGALG00000003374 4436 0.986 - - - - 0.986 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
98. THAP4 ENSGALG00000006283 1707 0.986 - - - - - - - 0.986 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
99. PGAM5 ENSGALG00000002137 7700 0.986 - - - - 0.986 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
100. TM2D2 ENSGALG00000003356 7088 0.986 - - - - 0.986 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]

There are 288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA