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Results for Hoxd3

Gene Name Gene ID Reads Annotation
Hoxd3 ENSMUSG00000079277 3066 homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]







Genes with expression patterns similar to Hoxd3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxd3 ENSMUSG00000079277 3066 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]
2. Pax3 ENSMUSG00000004872 3095 3.262 - - 0.778 0.732 0.897 0.855 paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
3. Sox2 ENSMUSG00000074637 8409 2.911 - - 0.719 0.775 0.714 0.703 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
4. Ckb ENSMUSG00000001270 8443 2.442 - - 0.723 0.796 - 0.923 creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
5. Nrarp ENSMUSG00000078202 1708 2.345 - - 0.741 0.735 - 0.869 Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
6. Pou3f2 ENSMUSG00000095139 2416 2.235 0.708 - 0.713 0.814 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
7. Draxin ENSMUSG00000029005 726 1.706 - - - - 0.840 0.866 dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
8. Slc1a2 ENSMUSG00000005089 830 1.662 - - - 0.743 - 0.919 solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
9. Cdc25b ENSMUSG00000027330 1004 1.655 - - - - 0.788 0.867 cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
10. Jam2 ENSMUSG00000053062 1020 1.617 - - - 0.782 0.835 - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
11. Pou3f3 ENSMUSG00000045515 5137 1.61 - - 0.800 0.810 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
12. Zic2 ENSMUSG00000061524 472 1.608 - - - 0.773 0.835 - zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
13. Hoxb9 ENSMUSG00000020875 2764 1.594 0.771 - 0.823 - - - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
14. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 1.581 - - - - 0.819 0.762 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
15. Lmx1b ENSMUSG00000038765 683 1.576 - - - 0.767 - 0.809 LIM homeobox transcription factor 1 beta [Source:MGI Symbol;Acc:MGI:1100513]
16. Msi1 ENSMUSG00000054256 13785 1.575 - - 0.779 0.796 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
17. Ildr2 ENSMUSG00000040612 1142 1.575 0.739 - - - - 0.836 immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
18. Car2 ENSMUSG00000027562 1176 1.548 - - - - 0.705 0.843 carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
19. C130071C03Rik ENSMUSG00000050334 1582 1.531 - - 0.741 0.790 - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
20. Miat ENSMUSG00000097767 4258 1.508 - - - 0.756 0.752 - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
21. Zfp536 ENSMUSG00000043456 869 1.49 - - - 0.713 0.777 - zinc finger protein 536 [Source:MGI Symbol;Acc:MGI:1926102]
22. Robo3 ENSMUSG00000032128 389 1.488 - - - 0.713 0.775 - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
23. Hoxb5 ENSMUSG00000038700 2439 1.487 - - - - 0.712 0.775 homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
24. Trp53i11 ENSMUSG00000068735 15944 1.479 - - - 0.730 0.749 - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
25. Phf21b ENSMUSG00000016624 849 1.467 - - 0.732 0.735 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
26. Chrna4 ENSMUSG00000027577 941 1.465 - - - 0.704 0.761 - cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
27. Pde7a ENSMUSG00000069094 2633 1.454 - - - - 0.725 0.729 phosphodiesterase 7A [Source:MGI Symbol;Acc:MGI:1202402]
28. Hoxc9 ENSMUSG00000036139 4145 1.451 - - 0.731 0.720 - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
29. Dtx4 ENSMUSG00000039982 2901 1.443 - - - 0.730 - 0.713 deltex 4, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:2672905]
30. Mt2 ENSMUSG00000031762 1817 1.434 0.709 - - - - 0.725 metallothionein 2 [Source:MGI Symbol;Acc:MGI:97172]
31. Map1b ENSMUSG00000052727 28977 1.433 - - - 0.707 - 0.726 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
32. Faim ENSMUSG00000032463 3379 1.422 - - - - 0.708 0.714 Fas apoptotic inhibitory molecule [Source:MGI Symbol;Acc:MGI:1344387]
33. Epb4.1l5 Epb4.1l5 1436 0.949 - 0.949 - - - -
34. Syngr2 ENSMUSG00000048277 809 0.949 - 0.949 - - - - synaptogyrin 2 [Source:MGI Symbol;Acc:MGI:1328324]
35. Psmd14 ENSMUSG00000026914 8998 0.948 - 0.948 - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [Source:MGI Symbol;Acc:MGI:1913284]
36. Dll3 ENSMUSG00000003436 1086 0.921 - - - - 0.921 - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
37. Hibadh ENSMUSG00000029776 3064 0.907 - 0.907 - - - - 3-hydroxyisobutyrate dehydrogenase [Source:MGI Symbol;Acc:MGI:1889802]
38. Eif3i ENSMUSG00000028798 5912 0.906 - 0.906 - - - - eukaryotic translation initiation factor 3, subunit I [Source:MGI Symbol;Acc:MGI:1860763]
39. Coa3 ENSMUSG00000017188 2718 0.905 - 0.905 - - - - cytochrome C oxidase assembly factor 3 [Source:MGI Symbol;Acc:MGI:1098757]
40. Kcnk2 ENSMUSG00000037624 670 0.903 - 0.903 - - - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
41. Mrpl14 ENSMUSG00000023939 4612 0.89 - 0.890 - - - - mitochondrial ribosomal protein L14 [Source:MGI Symbol;Acc:MGI:1333864]
42. Pgrmc2 ENSMUSG00000049940 3815 0.885 - 0.885 - - - - progesterone receptor membrane component 2 [Source:MGI Symbol;Acc:MGI:1918054]
43. Brd2 ENSMUSG00000024335 4271 0.88 - 0.880 - - - - bromodomain containing 2 [Source:MGI Symbol;Acc:MGI:99495]
44. Utp11l 5972 0.858 - 0.858 - - - - UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast), transcript variant X2
45. Spc24 ENSMUSG00000074476 5240 0.857 - 0.857 - - - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914879]
46. D15Ertd621e D15Ertd621e 4078 0.851 - 0.851 - - - -
47. Usmg5 ENSMUSG00000071528 6916 0.846 - 0.846 - - - - upregulated during skeletal muscle growth 5 [Source:MGI Symbol;Acc:MGI:1891435]
48. Ankhd1 ENSMUSG00000024483 2807 0.845 - 0.845 - - - - ankyrin repeat and KH domain containing 1 [Source:MGI Symbol;Acc:MGI:1921733]
49. Tubb4b ENSMUSG00000036752 6429 0.845 - - - - - 0.845 tubulin, beta 4B class IVB [Source:MGI Symbol;Acc:MGI:1915472]
50. Tspan13 ENSMUSG00000020577 1613 0.844 - - - - - 0.844 tetraspanin 13 [Source:MGI Symbol;Acc:MGI:1913359]
51. Jam3 ENSMUSG00000031990 5781 0.841 - - - - 0.841 - junction adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1933825]
52. Epb4.1l4a Epb4.1l4a 1817 0.837 - - - - - 0.837
53. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 13087 0.833 - 0.833 - - - - serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
54. Abhd4 ENSMUSG00000040997 4547 0.831 - 0.831 - - - - abhydrolase domain containing 4 [Source:MGI Symbol;Acc:MGI:1915938]
55. Ezr ENSMUSG00000052397 5143 0.828 - 0.828 - - - - ezrin [Source:MGI Symbol;Acc:MGI:98931]
56. Sall3 ENSMUSG00000024565 449 0.827 - - - - - 0.827 spalt like transcription factor 3 [Source:MGI Symbol;Acc:MGI:109295]
57. Mien1 ENSMUSG00000002580 1326 0.827 - - - - - 0.827 migration and invasion enhancer 1 [Source:MGI Symbol;Acc:MGI:1913678]
58. St18 ENSMUSG00000033740 408 0.816 - - - - - 0.816 suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
59. Slc25a39 ENSMUSG00000018677 15989 0.813 - 0.813 - - - - solute carrier family 25, member 39 [Source:MGI Symbol;Acc:MGI:1196386]
60. Psma1 ENSMUSG00000030751 10411 0.81 - 0.810 - - - - proteasome (prosome, macropain) subunit, alpha type 1 [Source:MGI Symbol;Acc:MGI:1347005]
61. Tpd52 ENSMUSG00000027506 1885 0.809 - - - - - 0.809 tumor protein D52 [Source:MGI Symbol;Acc:MGI:107749]
62. Hspa4l ENSMUSG00000025757, ENSMUSG00000115951 1283 0.805 - - - - 0.805 - heat shock protein 4 like [Source:MGI Symbol;Acc:MGI:107422]
63. Rnf5 ENSMUSG00000015478 1763 0.802 - - - - - 0.802 ring finger protein 5 [Source:MGI Symbol;Acc:MGI:1860076]
64. Zic3 ENSMUSG00000067860 549 0.801 - - - 0.801 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
65. Unc5c ENSMUSG00000059921 6834 0.8 - 0.800 - - - - unc-5 netrin receptor C [Source:MGI Symbol;Acc:MGI:1095412]
66. Adcyap1r1 ENSMUSG00000029778 817 0.798 - - - - - 0.798 adenylate cyclase activating polypeptide 1 receptor 1 [Source:MGI Symbol;Acc:MGI:108449]
67. Ebf1 ENSMUSG00000057098 3112 0.797 - - - - - 0.797 early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
68. Dach1 ENSMUSG00000055639 1422 0.797 - - - - - 0.797 dachshund family transcription factor 1 [Source:MGI Symbol;Acc:MGI:1277991]
69. Smug1 ENSMUSG00000036061 1056 0.796 - - - - - 0.796 single-strand selective monofunctional uracil DNA glycosylase [Source:MGI Symbol;Acc:MGI:1918976]
70. Ppp2ca ENSMUSG00000020349 20223 0.796 - 0.796 - - - - protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform [Source:MGI Symbol;Acc:MGI:1321159]
71. Acsl6 ENSMUSG00000020333 249 0.795 - - - - - 0.795 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
72. Iars ENSMUSG00000037851 2428 0.794 - - - - - 0.794 isoleucine-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2145219]
73. Nhlh2 ENSMUSG00000048540 1310 0.794 - - - 0.794 - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
74. Camta1 ENSMUSG00000014592 3380 0.792 - - - - - 0.792 calmodulin binding transcription activator 1 [Source:MGI Symbol;Acc:MGI:2140230]
75. Trak1 ENSMUSG00000032536 705 0.786 - - - - - 0.786 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
76. Hbb-bt ENSMUSG00000073940 12887 0.785 - - - - - 0.785 hemoglobin, beta adult t chain [Source:MGI Symbol;Acc:MGI:5474850]
77. Mdga1 ENSMUSG00000043557 531 0.782 - - - - - 0.782 MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:MGI Symbol;Acc:MGI:1922012]
78. Dpysl5 ENSMUSG00000029168 2096 0.782 - - - - - 0.782 dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
79. Arf1 ENSMUSG00000048076 18453 0.781 - 0.781 - - - - ADP-ribosylation factor 1 [Source:MGI Symbol;Acc:MGI:99431]
80. Bmi1 ENSMUSG00000026739 2189 0.779 - - - - - 0.779 Bmi1 polycomb ring finger oncogene [Source:MGI Symbol;Acc:MGI:88174]
81. Hoxc8 ENSMUSG00000001657 16443 0.779 - - - - 0.779 - homeobox C8 [Source:MGI Symbol;Acc:MGI:96198]
82. Hoxc10 ENSMUSG00000022484 1050 0.779 - - - - - 0.779 homeobox C10 [Source:MGI Symbol;Acc:MGI:96192]
83. Nasp ENSMUSG00000028693 20038 0.777 - 0.777 - - - - nuclear autoantigenic sperm protein (histone-binding) [Source:MGI Symbol;Acc:MGI:1355328]
84. Gdf11 ENSMUSG00000025352 1515 0.777 - - - - - 0.777 growth differentiation factor 11 [Source:MGI Symbol;Acc:MGI:1338027]
85. Hbb-bs ENSMUSG00000052305 2551 0.776 - - - - - 0.776 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
86. Tspan18 ENSMUSG00000027217 3290 0.776 - - - - - 0.776 tetraspanin 18 [Source:MGI Symbol;Acc:MGI:1917186]
87. Crabp2 ENSMUSG00000004885 6976 0.775 - - 0.775 - - - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
88. Gja1 ENSMUSG00000050953 1894 0.775 - - - - - 0.775 gap junction protein, alpha 1 [Source:MGI Symbol;Acc:MGI:95713]
89. Lgr5 ENSMUSG00000020140 516 0.774 - - - - - 0.774 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
90. Mycl ENSMUSG00000028654 904 0.774 - - - - 0.774 - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
91. Ppt1 ENSMUSG00000028657 1603 0.774 - - - - - 0.774 palmitoyl-protein thioesterase 1 [Source:MGI Symbol;Acc:MGI:1298204]
92. 2610017I09Rik 2610017I09Rik 1595 0.772 - - - 0.772 - -
93. Sox3 ENSMUSG00000045179 1137 0.772 - - 0.772 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
94. Chst10 ENSMUSG00000026080 667 0.771 - - - - - 0.771 carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
95. Zfand5 ENSMUSG00000024750 6972 0.77 - - - - 0.770 - zinc finger, AN1-type domain 5 [Source:MGI Symbol;Acc:MGI:1278334]
96. Tbc1d9 ENSMUSG00000031709 688 0.769 - - - - 0.769 - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
97. 5930412G12Rik ENSMUSG00000072591 503 0.769 - - - - - 0.769 RIKEN cDNA 5930412G12 gene [Source:MGI Symbol;Acc:MGI:2442398]
98. Cdca8 ENSMUSG00000028873 5637 0.767 - - - - - 0.767 cell division cycle associated 8 [Source:MGI Symbol;Acc:MGI:1196274]
99. Parp2 ENSMUSG00000036023 2512 0.767 - - - - - 0.767 poly (ADP-ribose) polymerase family, member 2 [Source:MGI Symbol;Acc:MGI:1341112]
100. Zic1 ENSMUSG00000032368 7734 0.765 - - - 0.765 - - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]

There are 288 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA