Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hoxd11

Gene Name Gene ID Reads Annotation
Hoxd11 ENSMUSG00000042499 16 homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]







Genes with expression patterns similar to Hoxd11

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxd11 ENSMUSG00000042499 16 5 1.000 1.000 1.000 - 1.000 1.000 homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
2. Irs3 ENSMUSG00000047182 11 1.972 - 0.972 - - - 1.000 insulin receptor substrate 3 [Source:MGI Symbol;Acc:MGI:1194882]
3. Gm12198 ENSMUSG00000085564 18 1.971 - 0.971 1.000 - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
4. Mpc1 ENSMUSG00000023861 7 1.726 1.000 - - - 0.726 - mitochondrial pyruvate carrier 1 [Source:MGI Symbol;Acc:MGI:1915240]
5. Pde6a ENSMUSG00000024575 9 1.711 0.711 - 1.000 - - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:MGI Symbol;Acc:MGI:97524]
6. Cmya5 ENSMUSG00000047419 11 1.437 0.722 - 0.715 - - - cardiomyopathy associated 5 [Source:MGI Symbol;Acc:MGI:1923719]
7. Gm11221 ENSMUSG00000082998 16 1 - - - - - 1.000 predicted gene 11221 [Source:MGI Symbol;Acc:MGI:3651633]
8. Wnt10a ENSMUSG00000026167 21 1 1.000 - - - - - wingless-type MMTV integration site family, member 10A [Source:MGI Symbol;Acc:MGI:108071]
9. Mug2 ENSMUSG00000030131 1 1 1.000 - - - - - murinoglobulin 2 [Source:MGI Symbol;Acc:MGI:99836]
10. Nobox ENSMUSG00000029736 1 1 - - - - - 1.000 NOBOX oogenesis homeobox [Source:MGI Symbol;Acc:MGI:108011]
11. Gm26792 ENSMUSG00000096996 3 1 - - - - - 1.000 predicted gene, 26792 [Source:MGI Symbol;Acc:MGI:5477286]
12. Gm6526 ENSMUSG00000091698 1 1 - - - - - 1.000 predicted gene 6526 [Source:MGI Symbol;Acc:MGI:3648758]
13. 1700066O22Rik ENSMUSG00000085800 0 1 - - 1.000 - - - RIKEN cDNA 1700066O22 gene [Source:MGI Symbol;Acc:MGI:1920651]
14. mt-Nd4l ENSMUSG00000065947 12 1 - - 1.000 - - - mitochondrially encoded NADH dehydrogenase 4L [Source:MGI Symbol;Acc:MGI:102497]
15. Gm7162 ENSMUSG00000089817 1 1 1.000 - - - - - predicted gene 7162 [Source:MGI Symbol;Acc:MGI:3645097]
16. Gm10224 ENSMUSG00000080932 30 1 - - - - - 1.000 predicted pseudogene 10224 [Source:MGI Symbol;Acc:MGI:3642708]
17. Gm2956 ENSMUSG00000096574 2 1 1.000 - - - - - predicted gene 2956 [Source:MGI Symbol;Acc:MGI:3781134]
18. Gsta1 ENSMUSG00000074183 0 1 - - 1.000 - - - glutathione S-transferase, alpha 1 (Ya) [Source:MGI Symbol;Acc:MGI:1095417]
19. 4930502E09Rik ENSMUSG00000086799 5 1 1.000 - - - - - RIKEN cDNA 4930502E09 gene [Source:MGI Symbol;Acc:MGI:1922245]
20. 4632411P08Rik ENSMUSG00000097561 13 1 - - - - - 1.000 RIKEN cDNA 4632411P08 gene [Source:MGI Symbol;Acc:MGI:1925513]
21. A230050P20Rik ENSMUSG00000038884 10 1 - - - - - 1.000 RIKEN cDNA A230050P20 gene [Source:MGI Symbol;Acc:MGI:2441788]
22. 5530401N12Rik 5530401N12Rik 5 1 - - - - - 1.000
23. Pkp1 ENSMUSG00000026413 5 1 - - 1.000 - - - plakophilin 1 [Source:MGI Symbol;Acc:MGI:1328359]
24. Cep85l ENSMUSG00000038594 51 1 - - - - - 1.000 centrosomal protein 85-like [Source:MGI Symbol;Acc:MGI:3642684]
25. Gm26384 ENSMUSG00000076137 3 1 - - - - - 1.000 predicted gene, 26384 [Source:MGI Symbol;Acc:MGI:5456161]
26. Gm15767 ENSMUSG00000086021 0 1 - - 1.000 - - - predicted gene 15767 [Source:MGI Symbol;Acc:MGI:3783209]
27. Trpc7 ENSMUSG00000021541 3 1 - - - - - 1.000 transient receptor potential cation channel, subfamily C, member 7 [Source:MGI Symbol;Acc:MGI:1349470]
28. Gm13782 ENSMUSG00000086542 0 1 - - - - - 1.000 predicted gene 13782 [Source:MGI Symbol;Acc:MGI:3649363]
29. Klri2 ENSMUSG00000043932 8 1 - - 1.000 - - - killer cell lectin-like receptor family I member 2 [Source:MGI Symbol;Acc:MGI:2443965]
30. Tex101 ENSMUSG00000062773 0 1 - - 1.000 - - - testis expressed gene 101 [Source:MGI Symbol;Acc:MGI:1930791]
31. Stfa2 ENSMUSG00000022902 2 1 - - - - - 1.000 stefin A2 [Source:MGI Symbol;Acc:MGI:106197]
32. Gm11411 ENSMUSG00000083385 12 1 - - - - - 1.000 predicted gene 11411 [Source:MGI Symbol;Acc:MGI:3650904]
33. Gm2302 Gm2302 2 1 - - 1.000 - - -
34. 6330403L08Rik ENSMUSG00000075585 36 1 1.000 - - - - - RIKEN cDNA 6330403L08 gene [Source:MGI Symbol;Acc:MGI:1917994]
35. Rps12-ps17 ENSMUSG00000095137 1 1 - - - - - 1.000 ribosomal protein S12, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3643968]
36. Cpa5 ENSMUSG00000029788 11 1 - - 1.000 - - - carboxypeptidase A5 [Source:MGI Symbol;Acc:MGI:1921899]
37. Tlr1 ENSMUSG00000044827 9 1 - - 1.000 - - - toll-like receptor 1 [Source:MGI Symbol;Acc:MGI:1341295]
38. Gm15131 ENSMUSG00000082961 2 1 - - - - - 1.000 predicted gene 15131 [Source:MGI Symbol;Acc:MGI:3642416]
39. Igkv6-17 ENSMUSG00000095794 0 1 - - - - - 1.000 immunoglobulin kappa variable 6-17 [Source:MGI Symbol;Acc:MGI:1330833]
40. Gm12097 ENSMUSG00000081887 11 1 - - - - - 1.000 predicted gene 12097 [Source:MGI Symbol;Acc:MGI:3651582]
41. Gm26811 ENSMUSG00000097816 0 1 - - - - - 1.000 predicted gene, 26811 [Source:MGI Symbol;Acc:MGI:5477305]
42. Gm12093 ENSMUSG00000083917 0 1 - - - - - 1.000 predicted gene 12093 [Source:MGI Symbol;Acc:MGI:3650093]
43. Gm25188 ENSMUSG00000065847 6 1 - - 1.000 - - - predicted gene, 25188 [Source:MGI Symbol;Acc:MGI:5454965]
44. Gm5570 ENSMUSG00000073045 3 1 - - 1.000 - - - predicted gene 5570 [Source:MGI Symbol;Acc:MGI:3644382]
45. Fam71d ENSMUSG00000056987 1 1 1.000 - - - - - family with sequence similarity 71, member D [Source:MGI Symbol;Acc:MGI:1918147]
46. Gm7173 ENSMUSG00000073077 5 1 - - - - - 1.000 predicted gene 7173 [Source:MGI Symbol;Acc:MGI:3645063]
47. Rps19-ps4 ENSMUSG00000096699 3 1 - - - - - 1.000 ribosomal protein S19, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3645935]
48. Gm16047 Gm16047 5 1 - - - - - 1.000
49. Gm23104 ENSMUSG00000065656 6 1 1.000 - - - - - predicted gene, 23104 [Source:MGI Symbol;Acc:MGI:5452881]
50. 1810065E05Rik ENSMUSG00000013653 9 1 - - - - - 1.000 RIKEN cDNA 1810065E05 gene [Source:MGI Symbol;Acc:MGI:1917114]
51. Krt28 ENSMUSG00000055937 4 1 - - 1.000 - - - keratin 28 [Source:MGI Symbol;Acc:MGI:1918093]
52. Ms4a2 ENSMUSG00000024680 1 1 - - - - - 1.000 membrane-spanning 4-domains, subfamily A, member 2 [Source:MGI Symbol;Acc:MGI:95495]
53. Gm12503 ENSMUSG00000087326 4 1 - - - - - 1.000 predicted gene 12503 [Source:MGI Symbol;Acc:MGI:3651570]
54. Fmo6 ENSMUSG00000095576 1 1 - - 1.000 - - - flavin containing monooxygenase 6 [Source:MGI Symbol;Acc:MGI:2681841]
55. Apol7c ENSMUSG00000044309 0 1 - - - - - 1.000 apolipoprotein L 7c [Source:MGI Symbol;Acc:MGI:1920912]
56. 4922502B01Rik 4922502B01Rik 2 1 - - - - - 1.000
57. Cpn2 ENSMUSG00000023176 3 1 - - 1.000 - - - carboxypeptidase N, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1919006]
58. Gm16267 ENSMUSG00000084979 1 1 1.000 - - - - - predicted gene 16267 [Source:MGI Symbol;Acc:MGI:3826520]
59. n-R5s196 ENSMUSG00000065070 4 1 - - - - - 1.000 nuclear encoded rRNA 5S 196 [Source:MGI Symbol;Acc:MGI:4422061]
60. Apol6 ENSMUSG00000033576 1 1 - - - - - 1.000 apolipoprotein L 6 [Source:MGI Symbol;Acc:MGI:1919189]
61. Gm15246 ENSMUSG00000087159 6 1 1.000 - - - - - predicted gene 15246 [Source:MGI Symbol;Acc:MGI:3708120]
62. Esr2 ENSMUSG00000021055 9 1 - - - - - 1.000 estrogen receptor 2 (beta) [Source:MGI Symbol;Acc:MGI:109392]
63. Pcdhb12 ENSMUSG00000043458 4 1 - - - - - 1.000 protocadherin beta 12 [Source:MGI Symbol;Acc:MGI:2136747]
64. Gm6981 ENSMUSG00000098076 10 1 1.000 - - - - - predicted pseudogene 6981 [Source:MGI Symbol;Acc:MGI:3646966]
65. A130006I12Rik ENSMUSG00000069136 6 1 - - - - - 1.000 RIKEN cDNA A130006I12 gene [Source:MGI Symbol;Acc:MGI:2441774]
66. Gm16073 ENSMUSG00000079915 0 1 - - 1.000 - - - predicted gene 16073 [Source:MGI Symbol;Acc:MGI:3802177]
67. Scarna8 ENSMUSG00000088958 1 1 - - - - - 1.000 small Cajal body-specific RNA 8 [Source:MGI Symbol;Acc:MGI:3819488]
68. AA792892 ENSMUSG00000073497 6 1 - - - - - 1.000 expressed sequence AA792892 [Source:MGI Symbol;Acc:MGI:2140789]
69. Gm10490 ENSMUSG00000073290 2 1 - - 1.000 - - - predicted gene 10490 [Source:MGI Symbol;Acc:MGI:3642001]
70. Hspa1l ENSMUSG00000007033 4 1 - - - - - 1.000 heat shock protein 1-like [Source:MGI Symbol;Acc:MGI:96231]
71. Prps1l1 ENSMUSG00000092305 2 1 - - - - - 1.000 phosphoribosyl pyrophosphate synthetase 1-like 1 [Source:MGI Symbol;Acc:MGI:1922706]
72. Gm10157 ENSMUSG00000066270 5 1 - - - - - 1.000 predicted gene 10157 [Source:MGI Symbol;Acc:MGI:3642264]
73. Gm14461 ENSMUSG00000054510 1 1 1.000 - - - - - predicted gene 14461 [Source:MGI Symbol;Acc:MGI:3651589]
74. Gm17057 ENSMUSG00000090500 5 1 1.000 - - - - - predicted gene 17057 [Source:MGI Symbol;Acc:MGI:4937884]
75. Hist1h4h ENSMUSG00000060981 14 1 - - - - - 1.000 histone cluster 1, H4h [Source:MGI Symbol;Acc:MGI:2448427]
76. Sprtn ENSMUSG00000031986 4 1 1.000 - - - - - SprT-like N-terminal domain [Source:MGI Symbol;Acc:MGI:2685351]
77. Tmem72 ENSMUSG00000048108 3 1 - - 1.000 - - - transmembrane protein 72 [Source:MGI Symbol;Acc:MGI:2442707]
78. 9330179D12Rik ENSMUSG00000097166 3 1 1.000 - - - - - RIKEN cDNA 9330179D12 gene [Source:MGI Symbol;Acc:MGI:1924808]
79. Muc6 ENSMUSG00000048191 6 1 - - - - - 1.000 mucin 6, gastric [Source:MGI Symbol;Acc:MGI:2663233]
80. Spink5 ENSMUSG00000055561 3 1 1.000 - - - - - serine peptidase inhibitor, Kazal type 5 [Source:MGI Symbol;Acc:MGI:1919682]
81. Gm17597 ENSMUSG00000097613 0 1 - - - - - 1.000 predicted gene, 17597 [Source:MGI Symbol;Acc:MGI:4937231]
82. Btbd8 ENSMUSG00000111375 18 1 - - - - - 1.000 BTB (POZ) domain containing 8 [Source:MGI Symbol;Acc:MGI:3646208]
83. Spata21 ENSMUSG00000045004 3 1 - - 1.000 - - - spermatogenesis associated 21 [Source:MGI Symbol;Acc:MGI:3607787]
84. Slc8a1 ENSMUSG00000054640 12 1 - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1 [Source:MGI Symbol;Acc:MGI:107956]
85. 4930519D14Rik ENSMUSG00000086263 2 1 - - - - - 1.000 RIKEN cDNA 4930519D14 gene [Source:MGI Symbol;Acc:MGI:1922340]
86. Trim69 ENSMUSG00000033368 3 1 1.000 - - - - - tripartite motif-containing 69 [Source:MGI Symbol;Acc:MGI:1918178]
87. Gm16119 Gm16119 2 1 - - 1.000 - - -
88. Cdx1 ENSMUSG00000024619 3 1 - - - - - 1.000 caudal type homeobox 1 [Source:MGI Symbol;Acc:MGI:88360]
89. Gm26819 ENSMUSG00000097033 3 1 - - 1.000 - - - predicted gene, 26819 [Source:MGI Symbol;Acc:MGI:5477313]
90. Tex11 ENSMUSG00000009670 2 1 - - - - - 1.000 testis expressed gene 11 [Source:MGI Symbol;Acc:MGI:1933237]
91. Gm15794 ENSMUSG00000084108 0 1 - - - - - 1.000 predicted gene 15794 [Source:MGI Symbol;Acc:MGI:3783236]
92. 4930426L09Rik ENSMUSG00000026736 4 1 - - - - - 1.000 RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
93. Gm12357 Gm12357 0 1 - - - - - 1.000
94. 1810063I02Rik ENSMUSG00000085551 4 1 - - - - - 1.000 RIKEN cDNA 1810063I02 gene [Source:MGI Symbol;Acc:MGI:1917104]
95. 2410057H14Rik 2410057H14Rik 1 1 - - 1.000 - - -
96. Gm13151 Gm13151 9 1 - - - - - 1.000
97. I830134H01Rik ENSMUSG00000069554 0 1 - - - - - 1.000 RIKEN cDNA I830134H01 gene [Source:MGI Symbol;Acc:MGI:3588250]
98. 1700029H14Rik ENSMUSG00000031452 0 1 - - 1.000 - - - RIKEN cDNA 1700029H14 gene [Source:MGI Symbol;Acc:MGI:1913751]
99. Casr ENSMUSG00000051980 2 1 1.000 - - - - - calcium-sensing receptor [Source:MGI Symbol;Acc:MGI:1351351]
100. 4930505N22Rik ENSMUSG00000097690 3 1 - - - - - 1.000 RIKEN cDNA 4930505N22 gene [Source:MGI Symbol;Acc:MGI:1922306]

There are 325 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA