Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hoxc5

Gene Name Gene ID Reads Annotation
Hoxc5 ENSMUSG00000022485 1958 homeobox C5 [Source:MGI Symbol;Acc:MGI:96196]







Genes with expression patterns similar to Hoxc5

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxc5 ENSMUSG00000022485 1958 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C5 [Source:MGI Symbol;Acc:MGI:96196]
2. Atg3 ENSMUSG00000022663 1323 0.945 - 0.945 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
3. Gm7327 ENSMUSG00000050900 249 0.94 - 0.940 - - - - predicted gene 7327 [Source:MGI Symbol;Acc:MGI:3646274]
4. Mrps18a ENSMUSG00000023967 955 0.939 - 0.939 - - - - mitochondrial ribosomal protein S18A [Source:MGI Symbol;Acc:MGI:1915815]
5. Ift88 ENSMUSG00000040040 557 0.934 - 0.934 - - - - intraflagellar transport 88 [Source:MGI Symbol;Acc:MGI:98715]
6. Cars2 ENSMUSG00000056228 492 0.931 - 0.931 - - - - cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
7. Gmppa ENSMUSG00000033021 462 0.93 - 0.930 - - - - GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
8. Syne4 ENSMUSG00000019737 724 0.928 - 0.928 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
9. 1110059G10Rik ENSMUSG00000032551 1599 0.927 - 0.927 - - - - RIKEN cDNA 1110059G10 gene [Source:MGI Symbol;Acc:MGI:1913452]
10. Sh3glb2 ENSMUSG00000026860 1046 0.926 - 0.926 - - - - SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
11. Hist1h3c ENSMUSG00000069310 508 0.924 - 0.924 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
12. Pabpc4l ENSMUSG00000090919 1259 0.924 - 0.924 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
13. Cenpt ENSMUSG00000036672 1001 0.921 - 0.921 - - - - centromere protein T [Source:MGI Symbol;Acc:MGI:2443939]
14. Gm12942 332 0.919 - 0.919 - - - - predicted gene 12942
15. Ubp1 ENSMUSG00000009741 708 0.918 - 0.918 - - - - upstream binding protein 1 [Source:MGI Symbol;Acc:MGI:104889]
16. Osbpl2 ENSMUSG00000039050 960 0.917 - 0.917 - - - - oxysterol binding protein-like 2 [Source:MGI Symbol;Acc:MGI:2442832]
17. Harbi1 ENSMUSG00000027243 348 0.915 - 0.915 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
18. Aldh6a1 ENSMUSG00000021238 522 0.915 - 0.915 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]
19. Uvrag ENSMUSG00000035354 908 0.914 - 0.914 - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
20. Zfp11 ENSMUSG00000051034 218 0.913 - 0.913 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
21. Rbm12b1 ENSMUSG00000046667 331 0.913 - 0.913 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
22. Strn ENSMUSG00000024077 1056 0.913 - 0.913 - - - - striatin, calmodulin binding protein [Source:MGI Symbol;Acc:MGI:1333757]
23. AW146154 ENSMUSG00000074166 587 0.912 - 0.912 - - - - expressed sequence AW146154 [Source:MGI Symbol;Acc:MGI:2142212]
24. Gm25734 Gm25734 104 0.912 - 0.912 - - - -
25. Ppp4r4 ENSMUSG00000021209 242 0.912 - 0.912 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
26. Ap2a1 ENSMUSG00000060279 108 0.912 - 0.912 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
27. Extl1 ENSMUSG00000028838 63 0.912 - 0.912 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
28. Wdr46 ENSMUSG00000024312 449 0.912 - 0.912 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
29. Pdpr ENSMUSG00000033624 123 0.911 - 0.911 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
30. Cd302 ENSMUSG00000060703 214 0.911 - 0.911 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
31. Cyp27a1 ENSMUSG00000026170 153 0.911 - 0.911 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
32. Zfp71-rs1 Zfp71-rs1 629 0.911 - 0.911 - - - -
33. Atg13 ENSMUSG00000027244 1178 0.911 - 0.911 - - - - autophagy related 13 [Source:MGI Symbol;Acc:MGI:1196429]
34. Rpl27-ps2 ENSMUSG00000082171 89 0.911 - 0.911 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
35. Tmem55b 935 0.91 - 0.910 - - - - transmembrane protein 55b, transcript variant X3
36. Zbtb12 ENSMUSG00000049823 373 0.91 - 0.910 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
37. Klhl6 ENSMUSG00000043008 952 0.91 - 0.910 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
38. Usp35 ENSMUSG00000035713 112 0.91 - 0.910 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
39. Larp7 ENSMUSG00000027968 2270 0.909 - 0.909 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
40. Acbd3 ENSMUSG00000026499 1663 0.909 - 0.909 - - - - acyl-Coenzyme A binding domain containing 3 [Source:MGI Symbol;Acc:MGI:2181074]
41. Ubtd1 ENSMUSG00000025171 336 0.909 - 0.909 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]
42. Ptges3l ENSMUSG00000097487 146 0.909 - 0.909 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
43. Rab11fip5 ENSMUSG00000051343 496 0.909 - 0.909 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
44. Smpd3 ENSMUSG00000031906 194 0.909 - 0.909 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
45. Tmcc1 ENSMUSG00000030126 2753 0.908 - 0.908 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
46. Csrp2bp 1398 0.908 - 0.908 - - - - cysteine and glycine-rich protein 2 binding protein, transcript variant 1
47. Gm26782 ENSMUSG00000097431 428 0.908 - 0.908 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
48. Smim4 ENSMUSG00000058351 454 0.908 - 0.908 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
49. Ing2 ENSMUSG00000063049 913 0.908 - 0.908 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
50. Kcnk5 ENSMUSG00000023243 191 0.907 - 0.907 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
51. Slc38a3 ENSMUSG00000010064 147 0.907 - 0.907 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
52. Fam57a ENSMUSG00000069808 616 0.907 - 0.907 - - - - family with sequence similarity 57, member A [Source:MGI Symbol;Acc:MGI:2151840]
53. Plekhm1 ENSMUSG00000034247 251 0.907 - 0.907 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
54. 2610035D17Rik ENSMUSG00000087259 651 0.907 - 0.907 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
55. Cetn4 ENSMUSG00000045031 377 0.906 - 0.906 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
56. Smim12 ENSMUSG00000042380 1404 0.906 - 0.906 - - - - small integral membrane protein 12 [Source:MGI Symbol;Acc:MGI:1933141]
57. Car8 ENSMUSG00000041261 286 0.906 - 0.906 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
58. Corin ENSMUSG00000005220 269 0.906 - 0.906 - - - - corin [Source:MGI Symbol;Acc:MGI:1349451]
59. AK129341 AK129341 204 0.906 - 0.906 - - - -
60. Dhrs1 ENSMUSG00000002332 3014 0.906 - 0.906 - - - - dehydrogenase/reductase (SDR family) member 1 [Source:MGI Symbol;Acc:MGI:1196314]
61. Zfp865 ENSMUSG00000074405 1223 0.905 - 0.905 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
62. Frk ENSMUSG00000019779 639 0.905 - 0.905 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
63. Pla2g15 ENSMUSG00000031903 321 0.905 - 0.905 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
64. Gm25735 ENSMUSG00000092905 617 0.905 - 0.905 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
65. Rad51ap1 ENSMUSG00000030346 1698 0.904 - 0.904 - - - - RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
66. 0610009B22Rik ENSMUSG00000007777 752 0.904 - 0.904 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
67. Tmem186 ENSMUSG00000043140 711 0.904 - 0.904 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
68. Tmem26 ENSMUSG00000060044 379 0.903 - 0.903 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
69. Apoo ENSMUSG00000079508 815 0.903 - 0.903 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
70. Aldh4a1 ENSMUSG00000028737 1176 0.903 - 0.903 - - - - aldehyde dehydrogenase 4 family, member A1 [Source:MGI Symbol;Acc:MGI:2443883]
71. 9930111J21Rik2 ENSMUSG00000069892 1273 0.903 - 0.903 - - - - RIKEN cDNA 9930111J21 gene 2 [Source:MGI Symbol;Acc:MGI:3711310]
72. Gnb4 ENSMUSG00000027669 1747 0.902 - 0.902 - - - - guanine nucleotide binding protein (G protein), beta 4 [Source:MGI Symbol;Acc:MGI:104581]
73. Gm5776 ENSMUSG00000099647 589 0.902 - 0.902 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
74. Gmds ENSMUSG00000038372 653 0.901 - 0.901 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
75. 2210408I21Rik ENSMUSG00000071252 189 0.901 - 0.901 - - - - RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
76. Suclg2 ENSMUSG00000061838 465 0.901 - 0.901 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
77. Flt3 ENSMUSG00000042817 515 0.9 - 0.900 - - - - FMS-like tyrosine kinase 3 [Source:MGI Symbol;Acc:MGI:95559]
78. Mcc ENSMUSG00000071856 4024 0.9 - 0.900 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
79. Mirg ENSMUSG00000097391 2711 0.9 - 0.900 - - - - miRNA containing gene [Source:MGI Symbol;Acc:MGI:3781106]
80. Tmem126b ENSMUSG00000030614 743 0.9 - 0.900 - - - - transmembrane protein 126B [Source:MGI Symbol;Acc:MGI:1915722]
81. Akt2 ENSMUSG00000004056 2343 0.9 - 0.900 - - - - thymoma viral proto-oncogene 2 [Source:MGI Symbol;Acc:MGI:104874]
82. Inadl 509 0.9 - 0.900 - - - - InaD-like (Drosophila), transcript variant X9
83. Frg1 ENSMUSG00000031590 1255 0.9 - 0.900 - - - - FSHD region gene 1 [Source:MGI Symbol;Acc:MGI:893597]
84. Twf2 ENSMUSG00000023277 849 0.9 - 0.900 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
85. Chd9 ENSMUSG00000056608 1536 0.899 - 0.899 - - - - chromodomain helicase DNA binding protein 9 [Source:MGI Symbol;Acc:MGI:1924001]
86. Mical2 ENSMUSG00000038244 295 0.899 - 0.899 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
87. Dhx34 ENSMUSG00000006019 240 0.898 - 0.898 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
88. Tmem176a ENSMUSG00000023367 831 0.898 - 0.898 - - - - transmembrane protein 176A [Source:MGI Symbol;Acc:MGI:1913308]
89. 4632419I22Rik 4632419I22Rik 1839 0.898 - 0.898 - - - -
90. Trmt112-ps2 ENSMUSG00000070572 2109 0.898 - 0.898 - - - - tRNA methyltransferase 11-2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3651720]
91. Wdr74 ENSMUSG00000042729 669 0.897 - 0.897 - - - - WD repeat domain 74 [Source:MGI Symbol;Acc:MGI:2147427]
92. Scamp1 ENSMUSG00000021687 1701 0.897 - 0.897 - - - - secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]
93. Rin2 ENSMUSG00000001768 996 0.897 - 0.897 - - - - Ras and Rab interactor 2 [Source:MGI Symbol;Acc:MGI:1921280]
94. Tmem135 ENSMUSG00000039428 946 0.897 - 0.897 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
95. Nradd ENSMUSG00000032491 668 0.897 - 0.897 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
96. Bckdha ENSMUSG00000060376 653 0.896 - 0.896 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
97. Lonp2 ENSMUSG00000047866 1312 0.896 - 0.896 - - - - lon peptidase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1914137]
98. Ssna1 ENSMUSG00000026966 1568 0.896 - 0.896 - - - - SS nuclear autoantigen 1 [Source:MGI Symbol;Acc:MGI:1915725]
99. Zfp369 ENSMUSG00000021514 1130 0.895 - 0.895 - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
100. Gm4944 968 0.895 - 0.895 - - - - predicted gene 4944

There are 238 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA