Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Hoxb9

Gene Name Gene ID Reads Annotation
Hoxb9 ENSMUSG00000020875 2764 homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]







Genes with expression patterns similar to Hoxb9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxb9 ENSMUSG00000020875 2764 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
2. Phf21b ENSMUSG00000016624 849 3.799 0.710 0.736 0.707 0.815 0.831 - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
3. Pou3f2 ENSMUSG00000095139 2416 3.348 0.872 0.747 0.856 0.873 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
4. Sox2 ENSMUSG00000074637 8409 3.253 0.794 0.737 0.831 0.891 - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
5. Ckb ENSMUSG00000001270 8443 3.168 0.818 - 0.772 0.844 0.734 - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
6. Scube2 ENSMUSG00000007279 406 2.845 0.738 0.700 - 0.700 - 0.707 signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
7. C130071C03Rik ENSMUSG00000050334 1582 2.457 0.709 - 0.891 0.857 - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
8. Nrarp ENSMUSG00000078202 1708 2.376 0.798 - 0.783 0.795 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
9. Sall3 ENSMUSG00000024565 449 2.329 0.781 - 0.754 0.794 - - spalt like transcription factor 3 [Source:MGI Symbol;Acc:MGI:109295]
10. Pax3 ENSMUSG00000004872 3095 2.314 0.769 - 0.746 0.799 - - paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
11. Trim2 ENSMUSG00000027993 3587 2.302 0.769 - 0.741 0.792 - - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
12. Gpr98 Gpr98 1797 2.3 0.768 - - 0.731 0.801 -
13. Hoxc9 ENSMUSG00000036139 4145 2.281 0.704 - 0.752 0.825 - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
14. Sox3 ENSMUSG00000045179 1137 2.278 0.786 - 0.778 0.714 - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
15. 2610017I09Rik 2610017I09Rik 1595 2.263 0.728 - - 0.780 - 0.755
16. Miat ENSMUSG00000097767 4258 2.26 0.767 - 0.706 0.787 - - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
17. Hes5 ENSMUSG00000048001 1640 2.256 0.720 - 0.764 - 0.772 - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
18. Pgpep1 ENSMUSG00000056204 2455 2.196 0.714 - - 0.745 - 0.737 pyroglutamyl-peptidase I [Source:MGI Symbol;Acc:MGI:1913772]
19. Crabp2 ENSMUSG00000004885 6976 2.196 - 0.723 0.763 - - 0.710 cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
20. Pou3f3 ENSMUSG00000045515 5137 1.671 - - 0.830 0.841 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
21. Fzd10 ENSMUSG00000081683 998 1.653 - - 0.784 0.869 - - frizzled class receptor 10 [Source:MGI Symbol;Acc:MGI:2136761]
22. Zic1 ENSMUSG00000032368 7734 1.649 - - - 0.837 0.812 - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
23. Jam2 ENSMUSG00000053062 1020 1.648 0.780 - - 0.868 - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
24. Dtx4 ENSMUSG00000039982 2901 1.625 - - 0.763 0.862 - - deltex 4, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:2672905]
25. Apba2 ENSMUSG00000030519 840 1.609 - - 0.776 0.833 - - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
26. Zic3 ENSMUSG00000067860 549 1.601 0.775 - - 0.826 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
27. Hoxd3 ENSMUSG00000079277 3066 1.594 0.771 - 0.823 - - - homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]
28. Glra1 ENSMUSG00000000263 586 1.591 - - - 0.723 0.868 - glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]
29. Nova2 ENSMUSG00000030411 400 1.579 0.741 - - - 0.838 - neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
30. Sema5b ENSMUSG00000052133 891 1.573 - - - 0.717 0.856 - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
31. Srgap3 ENSMUSG00000030257 2941 1.569 - - - 0.755 0.814 - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
32. Itgb8 ENSMUSG00000025321 698 1.566 0.840 - - - - 0.726 integrin beta 8 [Source:MGI Symbol;Acc:MGI:1338035]
33. Brsk2 ENSMUSG00000053046 398 1.564 - - 0.723 - 0.841 - BR serine/threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1923020]
34. Npas3 ENSMUSG00000021010 2049 1.558 0.749 - - 0.809 - - neuronal PAS domain protein 3 [Source:MGI Symbol;Acc:MGI:1351610]
35. Rfx4 ENSMUSG00000020037 455 1.542 0.788 - 0.754 - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
36. Mapk4 ENSMUSG00000024558 228 1.526 0.708 - - - 0.818 - mitogen-activated protein kinase 4 [Source:MGI Symbol;Acc:MGI:2444559]
37. Pax6 ENSMUSG00000027168 2751 1.503 0.701 - 0.802 - - - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
38. Dcc ENSMUSG00000060534 107 1.502 0.785 - - 0.717 - - deleted in colorectal carcinoma [Source:MGI Symbol;Acc:MGI:94869]
39. Ildr2 ENSMUSG00000040612 1142 1.498 0.779 - - 0.719 - - immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
40. Nhlh2 ENSMUSG00000048540 1310 1.493 - - 0.721 0.772 - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
41. Hspa4l ENSMUSG00000025757, ENSMUSG00000115951 1283 1.492 0.730 - - - - 0.762 heat shock protein 4 like [Source:MGI Symbol;Acc:MGI:107422]
42. Nuak2 ENSMUSG00000009772 426 1.478 0.708 - - - 0.770 - NUAK family, SNF1-like kinase, 2 [Source:MGI Symbol;Acc:MGI:1921387]
43. Gbx2 ENSMUSG00000034486 478 1.475 0.772 - - 0.703 - - gastrulation brain homeobox 2 [Source:MGI Symbol;Acc:MGI:95668]
44. Phyhipl ENSMUSG00000037747 636 1.467 - - - 0.747 - 0.720 phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
45. Rhbdl3 ENSMUSG00000017692 783 1.465 - - - 0.728 - 0.737 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
46. Igfbpl1 ENSMUSG00000035551 856 1.461 0.710 - - 0.751 - - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
47. 2510009E07Rik ENSMUSG00000043391 672 1.46 0.739 - - 0.721 - - RIKEN cDNA 2510009E07 gene [Source:MGI Symbol;Acc:MGI:1919440]
48. Hes6 ENSMUSG00000067071 1692 1.444 0.723 - - 0.721 - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
49. Zic5 ENSMUSG00000041703 1240 1.427 - - 0.703 0.724 - - zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
50. Msx3 ENSMUSG00000025469 236 1.42 0.704 - - 0.716 - - msh homeobox 3 [Source:MGI Symbol;Acc:MGI:106587]
51. Tagln3 ENSMUSG00000022658 6054 1.418 - - - 0.712 - 0.706 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
52. Zic4 ENSMUSG00000036972 1968 0.875 - - - 0.875 - - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
53. Bcat1 ENSMUSG00000030268 1915 0.865 - - - - 0.865 - branched chain aminotransferase 1, cytosolic [Source:MGI Symbol;Acc:MGI:104861]
54. Celsr2 ENSMUSG00000068740 2010 0.852 - - - - 0.852 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
55. Nckap5 ENSMUSG00000049690 542 0.843 0.843 - - - - - NCK-associated protein 5 [Source:MGI Symbol;Acc:MGI:2686394]
56. Zbtb18 ENSMUSG00000063659 1287 0.833 0.833 - - - - - zinc finger and BTB domain containing 18 [Source:MGI Symbol;Acc:MGI:1353609]
57. Msi1 ENSMUSG00000054256 13785 0.832 - - - 0.832 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
58. Ptprn2 ENSMUSG00000056553 489 0.831 - - - - - 0.831 protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:MGI Symbol;Acc:MGI:107418]
59. Cercam ENSMUSG00000039787 610 0.823 0.823 - - - - - cerebral endothelial cell adhesion molecule [Source:MGI Symbol;Acc:MGI:2139134]
60. Neurog2 ENSMUSG00000027967 670 0.82 - - - - - 0.820 neurogenin 2 [Source:MGI Symbol;Acc:MGI:109619]
61. Dynll2 ENSMUSG00000020483 7870 0.818 - - - - 0.818 - dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347]
62. Pou3f4 ENSMUSG00000056854 95 0.818 0.818 - - - - - POU domain, class 3, transcription factor 4 [Source:MGI Symbol;Acc:MGI:101894]
63. Prkar2a ENSMUSG00000032601 1406 0.817 0.817 - - - - - protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
64. Ccdc177 ENSMUSG00000062961 159 0.816 - - - - 0.816 - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
65. Cntn2 ENSMUSG00000053024 1798 0.815 - - - 0.815 - - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
66. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 0.814 - - - - 0.814 - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
67. Unc13b ENSMUSG00000028456 543 0.81 - - - - 0.810 - unc-13 homolog B [Source:MGI Symbol;Acc:MGI:1342278]
68. Grid2 ENSMUSG00000071424 180 0.81 - - - - 0.810 - glutamate receptor, ionotropic, delta 2 [Source:MGI Symbol;Acc:MGI:95813]
69. Slc35f1 ENSMUSG00000038602 342 0.81 0.810 - - - - - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
70. Hoxb1 ENSMUSG00000018973 357 0.809 0.809 - - - - - homeobox B1 [Source:MGI Symbol;Acc:MGI:96182]
71. Draxin ENSMUSG00000029005 726 0.802 - - - 0.802 - - dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
72. Hoxd1 ENSMUSG00000042448 332 0.797 - - - 0.797 - - homeobox D1 [Source:MGI Symbol;Acc:MGI:96201]
73. H2-D1 ENSMUSG00000073411 344 0.796 - - - - 0.796 - histocompatibility 2, D region locus 1 [Source:MGI Symbol;Acc:MGI:95896]
74. Cenpb ENSMUSG00000068267 5411 0.795 - - - - 0.795 - centromere protein B [Source:MGI Symbol;Acc:MGI:88376]
75. Stradb ENSMUSG00000026027 581 0.795 - - - - 0.795 - STE20-related kinase adaptor beta [Source:MGI Symbol;Acc:MGI:2144047]
76. H2-T23 ENSMUSG00000067212 1037 0.792 - - - - 0.792 - histocompatibility 2, T region locus 23 [Source:MGI Symbol;Acc:MGI:95957]
77. Lhx5 ENSMUSG00000029595 102 0.792 - - - - - 0.792 LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
78. Insm1 ENSMUSG00000068154 480 0.792 - - - - - 0.792 insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
79. Akap9 ENSMUSG00000040407 2939 0.791 - - - - 0.791 - A kinase (PRKA) anchor protein (yotiao) 9 [Source:MGI Symbol;Acc:MGI:2178217]
80. Pou4f1 ENSMUSG00000048349 61 0.791 - - - 0.791 - - POU domain, class 4, transcription factor 1 [Source:MGI Symbol;Acc:MGI:102525]
81. 1500026H17Rik ENSMUSG00000097383 939 0.788 - - - - 0.788 - RIKEN cDNA 1500026H17 gene [Source:MGI Symbol;Acc:MGI:1916252]
82. Sgsm3 ENSMUSG00000042303 608 0.786 - - - - 0.786 - small G protein signaling modulator 3 [Source:MGI Symbol;Acc:MGI:1916329]
83. Bend3 ENSMUSG00000038214 258 0.785 - - - - 0.785 - BEN domain containing 3 [Source:MGI Symbol;Acc:MGI:2677212]
84. Hivep3 ENSMUSG00000028634 196 0.784 - - - - 0.784 - human immunodeficiency virus type I enhancer binding protein 3 [Source:MGI Symbol;Acc:MGI:106589]
85. Zcchc18 ENSMUSG00000031428 2572 0.784 0.784 - - - - - zinc finger, CCHC domain containing 18 [Source:MGI Symbol;Acc:MGI:1914245]
86. Slc22a23 ENSMUSG00000038267 407 0.784 - - - - 0.784 - solute carrier family 22, member 23 [Source:MGI Symbol;Acc:MGI:1920352]
87. 4930480K23Rik ENSMUSG00000097284 105 0.783 - - - - 0.783 - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
88. Polr3a ENSMUSG00000025280 489 0.783 - - - - 0.783 - polymerase (RNA) III (DNA directed) polypeptide A [Source:MGI Symbol;Acc:MGI:2681836]
89. Ddx47 ENSMUSG00000030204 1576 0.782 - - - - 0.782 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]
90. Enc1 ENSMUSG00000041773 2185 0.782 - - - 0.782 - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
91. Med28 ENSMUSG00000015804 2949 0.781 - - - - 0.781 - mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
92. Tubb2b ENSMUSG00000045136 41060 0.781 - - - 0.781 - - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
93. Acss2 ENSMUSG00000027605 588 0.78 - - - - 0.780 - acyl-CoA synthetase short-chain family member 2 [Source:MGI Symbol;Acc:MGI:1890410]
94. Piga ENSMUSG00000031381 638 0.78 - - - - 0.780 - phosphatidylinositol glycan anchor biosynthesis, class A [Source:MGI Symbol;Acc:MGI:99461]
95. Acsl5 ENSMUSG00000024981 381 0.779 - - - - 0.779 - acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
96. Srcin1 ENSMUSG00000038453 86 0.779 - - - - - 0.779 SRC kinase signaling inhibitor 1 [Source:MGI Symbol;Acc:MGI:1933179]
97. Hoxc6 ENSMUSG00000001661 9818 0.778 - - - 0.778 - - homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
98. Sec14l2 ENSMUSG00000003585 109 0.778 - - - - 0.778 - SEC14-like lipid binding 2 [Source:MGI Symbol;Acc:MGI:1915065]
99. Pak1 ENSMUSG00000030774 2386 0.777 - - - - 0.777 - p21 (RAC1) activated kinase 1 [Source:MGI Symbol;Acc:MGI:1339975]
100. Gpr56 Gpr56 969 0.777 0.777 - - - - -

There are 213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA