Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hoxb3os

Gene Name Gene ID Reads Annotation
Hoxb3os ENSMUSG00000084844 82 homeobox B3 and homeobox B2, opposite strand [Source:MGI Symbol;Acc:MGI:103211]







Genes with expression patterns similar to Hoxb3os

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxb3os ENSMUSG00000084844 82 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B3 and homeobox B2, opposite strand [Source:MGI Symbol;Acc:MGI:103211]
2. Wnt1 ENSMUSG00000022997 961 1.546 0.785 - 0.761 - - - wingless-type MMTV integration site family, member 1 [Source:MGI Symbol;Acc:MGI:98953]
3. Atoh1 ENSMUSG00000073043 396 1.542 0.781 - 0.761 - - - atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
4. Wnt3a ENSMUSG00000009900 70 1.525 0.764 - 0.761 - - - wingless-type MMTV integration site family, member 3A [Source:MGI Symbol;Acc:MGI:98956]
5. Lmx1a ENSMUSG00000026686 123 1.426 0.725 - 0.701 - - - LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
6. Il17rc ENSMUSG00000030281 22 0.85 - - - - - 0.850 interleukin 17 receptor C [Source:MGI Symbol;Acc:MGI:2159336]
7. Gm22710 ENSMUSG00000080542 84 0.846 - - - - - 0.846 predicted gene, 22710 [Source:MGI Symbol;Acc:MGI:5452487]
8. Gm12463 ENSMUSG00000080916 11 0.834 - - - - - 0.834 predicted gene 12463 [Source:MGI Symbol;Acc:MGI:3650648]
9. Gm12222 ENSMUSG00000060068 31 0.827 - - - - - 0.827 predicted gene 12222 [Source:MGI Symbol;Acc:MGI:3649523]
10. Rhof ENSMUSG00000029449 202 0.823 - - 0.823 - - - ras homolog family member F (in filopodia) [Source:MGI Symbol;Acc:MGI:1345629]
11. Gm3362 ENSMUSG00000085442 127 0.816 - - 0.816 - - - predicted pseudogene 3362 [Source:MGI Symbol;Acc:MGI:3781540]
12. Ccnb2-ps ENSMUSG00000083718 83 0.813 - - - - - 0.813 cyclin B2, pseudogene [Source:MGI Symbol;Acc:MGI:3779896]
13. Gm7290 ENSMUSG00000078192 8 0.812 - - - - - 0.812 predicted pseudogene 7290 [Source:MGI Symbol;Acc:MGI:3646633]
14. Gm6808 ENSMUSG00000090162 21 0.812 - - - - - 0.812 predicted gene 6808 [Source:MGI Symbol;Acc:MGI:3645881]
15. Cd1d2 ENSMUSG00000041750 6 0.812 - - - - - 0.812 CD1d2 antigen [Source:MGI Symbol;Acc:MGI:107675]
16. A530072M11Rik ENSMUSG00000085112 8 0.812 - - - - - 0.812 RIKEN cDNA gene A530072M11 [Source:MGI Symbol;Acc:MGI:4440477]
17. Pdx1 ENSMUSG00000029644 41 0.812 - - - - - 0.812 pancreatic and duodenal homeobox 1 [Source:MGI Symbol;Acc:MGI:102851]
18. Upk2 ENSMUSG00000041523 4 0.812 - - - - - 0.812 uroplakin 2 [Source:MGI Symbol;Acc:MGI:98913]
19. A730032A03Rik ENSMUSG00000085649 4 0.812 - - - - - 0.812 RIKEN cDNA A730032A03 gene [Source:MGI Symbol;Acc:MGI:2444311]
20. Vmn2r42 ENSMUSG00000070844 9 0.812 - - - - - 0.812 vomeronasal 2, receptor 42 [Source:MGI Symbol;Acc:MGI:1316666]
21. Gm8824 ENSMUSG00000098028 8 0.812 - - - - - 0.812 predicted gene 8824 [Source:MGI Symbol;Acc:MGI:3647096]
22. Cyp2f2 ENSMUSG00000052974 4 0.812 - - - - - 0.812 cytochrome P450, family 2, subfamily f, polypeptide 2 [Source:MGI Symbol;Acc:MGI:88608]
23. 5430427O19Rik ENSMUSG00000025058 9 0.812 - - - - - 0.812 RIKEN cDNA 5430427O19 gene [Source:MGI Symbol;Acc:MGI:1918648]
24. Fcer2a ENSMUSG00000005540 20 0.809 - - - - - 0.809 Fc receptor, IgE, low affinity II, alpha polypeptide [Source:MGI Symbol;Acc:MGI:95497]
25. Ttc12 ENSMUSG00000040219 43 0.808 - - - 0.808 - - tetratricopeptide repeat domain 12 [Source:MGI Symbol;Acc:MGI:2444588]
26. Icos ENSMUSG00000026009 50 0.808 - - - - - 0.808 inducible T cell co-stimulator [Source:MGI Symbol;Acc:MGI:1858745]
27. Gm12840 ENSMUSG00000086320 98 0.806 - - 0.806 - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
28. Gck ENSMUSG00000041798 24 0.805 - - 0.805 - - - glucokinase [Source:MGI Symbol;Acc:MGI:1270854]
29. Gm25635 ENSMUSG00000064609 19 0.804 - - 0.804 - - - predicted gene, 25635 [Source:MGI Symbol;Acc:MGI:5455412]
30. Ppef2 ENSMUSG00000029410 7 0.804 - - - - - 0.804 protein phosphatase, EF hand calcium-binding domain 2 [Source:MGI Symbol;Acc:MGI:1342304]
31. Prg4 ENSMUSG00000006014 30 0.801 - - - - - 0.801 proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) [Source:MGI Symbol;Acc:MGI:1891344]
32. Timm8a2 ENSMUSG00000071229 14 0.799 - - - - - 0.799 translocase of inner mitochondrial membrane 8A2 [Source:MGI Symbol;Acc:MGI:3615492]
33. Gm25099 ENSMUSG00000095676 10 0.795 - - - - - 0.795 predicted gene, 25099 [Source:MGI Symbol;Acc:MGI:5454876]
34. Lat2 ENSMUSG00000040751 57 0.791 - - - - - 0.791 linker for activation of T cells family, member 2 [Source:MGI Symbol;Acc:MGI:1926479]
35. Gm14634 ENSMUSG00000085891 18 0.791 - - 0.791 - - - predicted gene 14634 [Source:MGI Symbol;Acc:MGI:3705147]
36. Polh ENSMUSG00000023953 65 0.789 - - - - - 0.789 polymerase (DNA directed), eta (RAD 30 related) [Source:MGI Symbol;Acc:MGI:1891457]
37. Fbxo2 ENSMUSG00000041556 15 0.788 - - 0.788 - - - F-box protein 2 [Source:MGI Symbol;Acc:MGI:2446216]
38. Abcb8 ENSMUSG00000028973 649 0.787 - - 0.787 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:MGI Symbol;Acc:MGI:1351667]
39. Gm12469 ENSMUSG00000083624 31 0.786 - - - - - 0.786 predicted gene 12469 [Source:MGI Symbol;Acc:MGI:3652114]
40. Rpl31-ps20 ENSMUSG00000058607 7 0.783 - - - - - 0.783 ribosomal protein L31, pseudogene 20 [Source:MGI Symbol;Acc:MGI:3644512]
41. A530040E14Rik ENSMUSG00000072109 27 0.783 - - - - - 0.783 RIKEN cDNA A530040E14 gene [Source:MGI Symbol;Acc:MGI:3612703]
42. Rpsa-ps9 ENSMUSG00000082895 35 0.781 - - 0.781 - - - ribosomal protein SA, pseudogene 9 [Source:MGI Symbol;Acc:MGI:3650393]
43. Gm15614 ENSMUSG00000085234 36 0.781 - 0.781 - - - - predicted gene 15614 [Source:MGI Symbol;Acc:MGI:3783059]
44. A130049A11Rik A130049A11Rik 44 0.78 - - 0.780 - - -
45. Myl3 ENSMUSG00000059741 20 0.779 - - - - - 0.779 myosin, light polypeptide 3 [Source:MGI Symbol;Acc:MGI:97268]
46. Pla2g7 ENSMUSG00000023913 28 0.775 - - 0.775 - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:MGI Symbol;Acc:MGI:1351327]
47. Gm5555 ENSMUSG00000083477 39 0.774 - - 0.774 - - - predicted pseudogene 5555 [Source:MGI Symbol;Acc:MGI:3648970]
48. Rftn1 ENSMUSG00000039316 375 0.772 - - 0.772 - - - raftlin lipid raft linker 1 [Source:MGI Symbol;Acc:MGI:1923688]
49. Gm24049 ENSMUSG00000076364 20 0.772 - - 0.772 - - - predicted gene, 24049 [Source:MGI Symbol;Acc:MGI:5453826]
50. Stk10 ENSMUSG00000020272 446 0.772 - - 0.772 - - - serine/threonine kinase 10 [Source:MGI Symbol;Acc:MGI:1099439]
51. Gm2244 ENSMUSG00000092036 15 0.772 - - - - - 0.772 predicted gene 2244 [Source:MGI Symbol;Acc:MGI:3780414]
52. Mir682 ENSMUSG00000076236 93 0.77 - - 0.770 - - - microRNA 682 [Source:MGI Symbol;Acc:MGI:3629911]
53. Sep-01 Sep-01 32 0.77 - - 0.770 - - -
54. Gm15566 ENSMUSG00000083772 81 0.768 - 0.768 - - - - predicted gene 15566 [Source:MGI Symbol;Acc:MGI:3783015]
55. Gm6335 ENSMUSG00000083392 5 0.768 0.768 - - - - - predicted gene 6335 [Source:MGI Symbol;Acc:MGI:3644202]
56. Gm24616 ENSMUSG00000065208 48 0.768 - - 0.768 - - - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
57. Gm5844 ENSMUSG00000082896 73 0.767 - - - - - 0.767 predicted gene 5844 [Source:MGI Symbol;Acc:MGI:3645252]
58. Dennd2d ENSMUSG00000027901 12 0.766 - - 0.766 - - - DENN/MADD domain containing 2D [Source:MGI Symbol;Acc:MGI:2181193]
59. Gm7860 ENSMUSG00000082535 15 0.765 - - 0.765 - - - predicted gene 7860 [Source:MGI Symbol;Acc:MGI:3644843]
60. Cela1 ENSMUSG00000023031 19 0.765 - - - - - 0.765 chymotrypsin-like elastase family, member 1 [Source:MGI Symbol;Acc:MGI:95314]
61. 2010315B03Rik ENSMUSG00000074829, ENSMUSG00000098810 29 0.764 - - 0.764 - - - RIKEN cDNA 2010315B03 gene [Source:MGI Symbol;Acc:MGI:1919321]
62. 3100002H09Rik ENSMUSG00000051219 11 0.763 - - 0.763 - - - RIKEN cDNA 3100002H09 gene [Source:MGI Symbol;Acc:MGI:1917499]
63. Gm4189 ENSMUSG00000092384 32 0.762 0.762 - - - - - predicted gene 4189 [Source:MGI Symbol;Acc:MGI:3782365]
64. Cav2 ENSMUSG00000000058 36 0.762 - - 0.762 - - - caveolin 2 [Source:MGI Symbol;Acc:MGI:107571]
65. Rccd1 ENSMUSG00000038930 21 0.762 - - 0.762 - - - RCC1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2444156]
66. Gm16585 ENSMUSG00000089657 13 0.761 - - 0.761 - - - predicted gene 16585 [Source:MGI Symbol;Acc:MGI:4415005]
67. Gm12412 ENSMUSG00000083685 7 0.761 - - 0.761 - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
68. Ddn ENSMUSG00000059213 51 0.761 - - 0.761 - - - dendrin [Source:MGI Symbol;Acc:MGI:108101]
69. Gm24611 ENSMUSG00000065206 4 0.761 - - 0.761 - - - predicted gene, 24611 [Source:MGI Symbol;Acc:MGI:5454388]
70. Ccr9 ENSMUSG00000029530 12 0.761 - - 0.761 - - - chemokine (C-C motif) receptor 9 [Source:MGI Symbol;Acc:MGI:1341902]
71. Hist1h2bg ENSMUSG00000058385 62 0.761 - - 0.761 - - - histone cluster 1, H2bg [Source:MGI Symbol;Acc:MGI:2448386]
72. 2310042D19Rik 2310042D19Rik 7 0.761 - - 0.761 - - -
73. Gm973 ENSMUSG00000047361 11 0.76 - - 0.760 - - - predicted gene 973 [Source:MGI Symbol;Acc:MGI:2685819]
74. Vcl ENSMUSG00000021823 49 0.76 - - 0.760 - - - vinculin [Source:MGI Symbol;Acc:MGI:98927]
75. Gpsm3 ENSMUSG00000034786 63 0.76 - - - - - 0.760 G-protein signalling modulator 3 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:2146785]
76. Gm8806 ENSMUSG00000083367 34 0.759 - - - - - 0.759 predicted gene 8806 [Source:MGI Symbol;Acc:MGI:3643511]
77. Gm24316 ENSMUSG00000096731 75 0.759 - - 0.759 - - - predicted gene, 24316 [Source:MGI Symbol;Acc:MGI:5454093]
78. Ddx43 ENSMUSG00000070291 17 0.759 - - 0.759 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
79. Barhl1 ENSMUSG00000026805 447 0.758 - - 0.758 - - - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
80. Gm26801 ENSMUSG00000097892 60 0.758 - - 0.758 - - - predicted gene, 26801 [Source:MGI Symbol;Acc:MGI:5477295]
81. Rgs11 ENSMUSG00000024186 47 0.758 0.758 - - - - - regulator of G-protein signaling 11 [Source:MGI Symbol;Acc:MGI:1354739]
82. Tmc2 ENSMUSG00000060332 36 0.757 - - 0.757 - - - transmembrane channel-like gene family 2 [Source:MGI Symbol;Acc:MGI:2151017]
83. H2-M3 ENSMUSG00000016206 28 0.757 0.757 - - - - - histocompatibility 2, M region locus 3 [Source:MGI Symbol;Acc:MGI:95915]
84. Nlrc4 ENSMUSG00000039193 9 0.757 - - 0.757 - - - NLR family, CARD domain containing 4 [Source:MGI Symbol;Acc:MGI:3036243]
85. Gm11615 ENSMUSG00000085083 13 0.756 - - 0.756 - - - predicted gene 11615 [Source:MGI Symbol;Acc:MGI:3652280]
86. Gm9294 ENSMUSG00000044609 103 0.756 - - - - - 0.756 predicted pseudogene 9294 [Source:MGI Symbol;Acc:MGI:3648888]
87. Tldc1 ENSMUSG00000034105 8 0.756 - - 0.756 - - - TBC/LysM associated domain containing 1 [Source:MGI Symbol;Acc:MGI:1921597]
88. Cdh20 ENSMUSG00000050840 15 0.755 0.755 - - - - - cadherin 20 [Source:MGI Symbol;Acc:MGI:1346069]
89. Gm11280 ENSMUSG00000085393 24 0.755 - - 0.755 - - - predicted gene 11280 [Source:MGI Symbol;Acc:MGI:3705200]
90. Mkln1os ENSMUSG00000086212 12 0.755 0.755 - - - - - muskelin 1, intracellular mediator containing kelch motifs, opposite strand [Source:MGI Symbol;Acc:MGI:3651306]
91. Kcne4 ENSMUSG00000047330 52 0.754 - - 0.754 - - - potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
92. Slc5a4b ENSMUSG00000020226 35 0.754 - - - - - 0.754 solute carrier family 5 (neutral amino acid transporters, system A), member 4b [Source:MGI Symbol;Acc:MGI:1890478]
93. Nfatc2ip ENSMUSG00000030722 920 0.753 - - 0.753 - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
94. Rbm11 ENSMUSG00000032940 28 0.752 - - - - - 0.752 RNA binding motif protein 11 [Source:MGI Symbol;Acc:MGI:2447622]
95. Fn3k ENSMUSG00000025175 18 0.751 - - 0.751 - - - fructosamine 3 kinase [Source:MGI Symbol;Acc:MGI:1926834]
96. Rxfp2 ENSMUSG00000053368 56 0.751 - - 0.751 - - - relaxin/insulin-like family peptide receptor 2 [Source:MGI Symbol;Acc:MGI:2153463]
97. Fam71e1 ENSMUSG00000051113 33 0.75 - - 0.750 - - - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
98. Pnoc ENSMUSG00000045731 104 0.75 0.750 - - - - - prepronociceptin [Source:MGI Symbol;Acc:MGI:105308]
99. Prkg2 ENSMUSG00000029334 72 0.75 - - 0.750 - - - protein kinase, cGMP-dependent, type II [Source:MGI Symbol;Acc:MGI:108173]
100. Gm20707 ENSMUSG00000093594 116 0.749 - - 0.749 - - - predicted gene 20707 [Source:MGI Symbol;Acc:MGI:5313154]

There are 125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA