Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hoxb3

Gene Name Gene ID Reads Annotation
Hoxb3 ENSMUSG00000048763 20 homeobox B3 [Source:MGI Symbol;Acc:MGI:96184]







Genes with expression patterns similar to Hoxb3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxb3 ENSMUSG00000048763 20 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox B3 [Source:MGI Symbol;Acc:MGI:96184]
2. Rpl36-ps3 ENSMUSG00000066629 25 1.488 0.726 - - - - 0.762 ribosomal protein L36, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3642480]
3. Gm9930 ENSMUSG00000053980 10 1 - - - - 1.000 - predicted gene 9930 [Source:MGI Symbol;Acc:MGI:3642400]
4. Gm15656 ENSMUSG00000087489 1 1 - - - - 1.000 - predicted gene 15656 [Source:MGI Symbol;Acc:MGI:3783099]
5. Gm15765 ENSMUSG00000082463 1 1 - - - - - 1.000 predicted gene 15765 [Source:MGI Symbol;Acc:MGI:3783207]
6. Gm12568 ENSMUSG00000081078 4 1 - - - - - 1.000 predicted gene 12568 [Source:MGI Symbol;Acc:MGI:3652153]
7. Gm20406 ENSMUSG00000092418 2 1 - - - - 1.000 - predicted gene 20406 [Source:MGI Symbol;Acc:MGI:5141871]
8. Gm11284 ENSMUSG00000083319 1 1 - - - - - 1.000 predicted gene 11284 [Source:MGI Symbol;Acc:MGI:3651654]
9. Gm8865 ENSMUSG00000086420 9 1 - - - - - 1.000 predicted gene 8865 [Source:MGI Symbol;Acc:MGI:3647567]
10. Gkn1 ENSMUSG00000030050 1 1 - - - - 1.000 - gastrokine 1 [Source:MGI Symbol;Acc:MGI:1913533]
11. Gm14435 ENSMUSG00000089951 1 1 - - - - 1.000 - predicted gene 14435 [Source:MGI Symbol;Acc:MGI:3702420]
12. Olr1 ENSMUSG00000030162 2 1 - - - - - 1.000 oxidized low density lipoprotein (lectin-like) receptor 1 [Source:MGI Symbol;Acc:MGI:1261434]
13. Mina 6 1 - - - - - 1.000 myc induced nuclear antigen, transcript variant X2
14. Gm5885 ENSMUSG00000095412 1 1 - - - - - 1.000 predicted gene 5885 [Source:MGI Symbol;Acc:MGI:3648672]
15. Gm15185 ENSMUSG00000083316 2 1 - - - - 1.000 - predicted gene 15185 [Source:MGI Symbol;Acc:MGI:3705599]
16. Gm16152 ENSMUSG00000087131 6 1 - - - - - 1.000 predicted gene 16152 [Source:MGI Symbol;Acc:MGI:3802058]
17. Gm10039 ENSMUSG00000091478 14 1 - - - - - 1.000 predicted pseudogene 10039 [Source:MGI Symbol;Acc:MGI:3704382]
18. Gm25348 ENSMUSG00000089586 11 1 - - - - 1.000 - predicted gene, 25348 [Source:MGI Symbol;Acc:MGI:5455125]
19. Cnga2 ENSMUSG00000005864 8 1 - - - - 1.000 - cyclic nucleotide gated channel alpha 2 [Source:MGI Symbol;Acc:MGI:108040]
20. 9530027J09Rik ENSMUSG00000097197 5 1 - - - - - 1.000 RIKEN cDNA 9530027J09 gene [Source:MGI Symbol;Acc:MGI:4820557]
21. Apex1 ENSMUSG00000035960 32 1 - - - - - 1.000 apurinic/apyrimidinic endonuclease 1 [Source:MGI Symbol;Acc:MGI:88042]
22. Gm11501 ENSMUSG00000081141 1 1 - - - - 1.000 - predicted gene 11501 [Source:MGI Symbol;Acc:MGI:3650728]
23. Gm11722 ENSMUSG00000086442 7 1 - - - - - 1.000 predicted gene 11722 [Source:MGI Symbol;Acc:MGI:3649870]
24. Ddx60 ENSMUSG00000037921 7 1 - - - - - 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 [Source:MGI Symbol;Acc:MGI:2384570]
25. Hist1h1t ENSMUSG00000036211 3 1 - - - - 1.000 - histone cluster 1, H1t [Source:MGI Symbol;Acc:MGI:1888530]
26. A830012C17Rik ENSMUSG00000085996 2 1 - - - - 1.000 - RIKEN cDNA A830012C17 gene [Source:MGI Symbol;Acc:MGI:2441830]
27. Gm11518 ENSMUSG00000081604 1 1 - - - - - 1.000 predicted gene 11518 [Source:MGI Symbol;Acc:MGI:3650306]
28. Atp4b ENSMUSG00000031449 1 1 - - - - - 1.000 ATPase, H+/K+ exchanging, beta polypeptide [Source:MGI Symbol;Acc:MGI:88114]
29. AU020206 ENSMUSG00000097415 6 1 - - - - - 1.000 expressed sequence AU020206 [Source:MGI Symbol;Acc:MGI:2142134]
30. Gm26808 ENSMUSG00000097489 16 1 - - - - - 1.000 predicted gene, 26808 [Source:MGI Symbol;Acc:MGI:5477302]
31. A530058N18Rik ENSMUSG00000087694, ENSMUSG00000092201 4 1 - - - - 1.000 - RIKEN cDNA A530058N18 gene [Source:MGI Symbol;Acc:MGI:2444858]
32. 3010003L10Rik 3010003L10Rik 1 1 - - - - - 1.000
33. Stac3 ENSMUSG00000040287 13 1 - - - - - 1.000 SH3 and cysteine rich domain 3 [Source:MGI Symbol;Acc:MGI:3606571]
34. 6030455H03Rik 6030455H03Rik 8 1 - - - - - 1.000
35. Serpina7 ENSMUSG00000031271 4 1 - - - - 1.000 - serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7 [Source:MGI Symbol;Acc:MGI:3041197]
36. Gm11190 ENSMUSG00000055045 2 1 - - - - - 1.000 predicted gene 11190 [Source:MGI Symbol;Acc:MGI:3651694]
37. Sstr4 ENSMUSG00000037014 1 1 - - - - - 1.000 somatostatin receptor 4 [Source:MGI Symbol;Acc:MGI:105372]
38. Fam83b ENSMUSG00000032358 2 1 - - - - 1.000 - family with sequence similarity 83, member B [Source:MGI Symbol;Acc:MGI:2685362]
39. 4922501L14Rik 4922501L14Rik 6 1 - - - - - 1.000
40. Gm13151 Gm13151 9 1 - - - - 1.000 -
41. Gpr61 ENSMUSG00000046793 3 1 - - - - - 1.000 G protein-coupled receptor 61 [Source:MGI Symbol;Acc:MGI:2441719]
42. Gm14141 ENSMUSG00000082375 1 1 - - - - - 1.000 predicted gene 14141 [Source:MGI Symbol;Acc:MGI:3649542]
43. Ccr2 ENSMUSG00000049103 3 1 - - - - - 1.000 chemokine (C-C motif) receptor 2 [Source:MGI Symbol;Acc:MGI:106185]
44. Rxfp3 ENSMUSG00000060735 18 1 - - - - - 1.000 relaxin family peptide receptor 3 [Source:MGI Symbol;Acc:MGI:2441827]
45. Gm14137 ENSMUSG00000055926 1 1 - - - - - 1.000 predicted gene 14137 [Source:MGI Symbol;Acc:MGI:3651144]
46. Chrna7 ENSMUSG00000030525 7 1 - - - - - 1.000 cholinergic receptor, nicotinic, alpha polypeptide 7 [Source:MGI Symbol;Acc:MGI:99779]
47. Gm19557 ENSMUSG00000097990 2 1 - - - - - 1.000 predicted gene, 19557 [Source:MGI Symbol;Acc:MGI:5011742]
48. Vmn1r39 ENSMUSG00000093755 1 1 - - - - 1.000 - vomeronasal 1 receptor 39 [Source:MGI Symbol;Acc:MGI:3644802]
49. Gm8330 ENSMUSG00000098048 14 1 - - - - 1.000 - predicted gene 8330 [Source:MGI Symbol;Acc:MGI:3644864]
50. Olfr1112 ENSMUSG00000044487 3 1 - - - - 1.000 - olfactory receptor 1112 [Source:MGI Symbol;Acc:MGI:3030946]
51. Aqp12 ENSMUSG00000045091 1 1 - - - - 1.000 - aquaporin 12 [Source:MGI Symbol;Acc:MGI:2664636]
52. Gm15789 ENSMUSG00000082057 2 1 - - - - 1.000 - predicted gene 15789 [Source:MGI Symbol;Acc:MGI:3783231]
53. Npy2r ENSMUSG00000028004 6 1 - - - - 1.000 - neuropeptide Y receptor Y2 [Source:MGI Symbol;Acc:MGI:108418]
54. Gm2042 ENSMUSG00000096276 1 1 - - - - 1.000 - predicted gene 2042 [Source:MGI Symbol;Acc:MGI:3800544]
55. Gm20691 ENSMUSG00000093505 1 1 - - - - 1.000 - predicted gene 20691 [Source:MGI Symbol;Acc:MGI:5313138]
56. Pabpc6 ENSMUSG00000046173 3 1 - - - - 1.000 - poly(A) binding protein, cytoplasmic 6 [Source:MGI Symbol;Acc:MGI:1914793]
57. Gm1848 ENSMUSG00000083892 1 1 - - - - - 1.000 predicted gene 1848 [Source:MGI Symbol;Acc:MGI:3037706]
58. A930024N18Rik ENSMUSG00000097566 1 1 - - - - 1.000 - RIKEN cDNA A930024N18 gene [Source:MGI Symbol;Acc:MGI:4360907]
59. Gm3667 ENSMUSG00000090691 3 1 - - - - - 1.000 predicted gene 3667 [Source:MGI Symbol;Acc:MGI:3781843]
60. Pramel1 ENSMUSG00000041805, ENSMUSG00000097880 2 1 - - - - - 1.000 preferentially expressed antigen in melanoma-like 1 [Source:MGI Symbol;Acc:MGI:1890541]
61. Vwc2l ENSMUSG00000045648 5 1 - - - - - 1.000 von Willebrand factor C domain-containing protein 2-like [Source:MGI Symbol;Acc:MGI:2444069]
62. 1700084J12Rik ENSMUSG00000058101 6 1 - - - - - 1.000 RIKEN cDNA 1700084J12 gene [Source:MGI Symbol;Acc:MGI:1920736]
63. Gm13100 ENSMUSG00000083749 3 1 - - - - - 1.000 predicted gene 13100 [Source:MGI Symbol;Acc:MGI:3650205]
64. Gm11528 ENSMUSG00000084856 2 1 - - - - - 1.000 predicted gene 11528 [Source:MGI Symbol;Acc:MGI:3649788]
65. Gm26760 ENSMUSG00000097068 16 1 - - - - - 1.000 predicted gene, 26760 [Source:MGI Symbol;Acc:MGI:5477254]
66. Fbxw16 ENSMUSG00000074062 1 1 - - - - 1.000 - F-box and WD-40 domain protein 16 [Source:MGI Symbol;Acc:MGI:2443324]
67. 9330101J02Rik 9330101J02Rik 1 1 - - - - 1.000 -
68. Gm12481 ENSMUSG00000043770 5 1 - - - - 1.000 - predicted gene 12481 [Source:MGI Symbol;Acc:MGI:3650743]
69. Gm17058 ENSMUSG00000090406 1 1 - - - - - 1.000 predicted gene 17058 [Source:MGI Symbol;Acc:MGI:4937885]
70. Fam169b ENSMUSG00000074071 5 1 - - - - 1.000 - family with sequence similarity 169, member B [Source:MGI Symbol;Acc:MGI:3644026]
71. Gm14388 ENSMUSG00000084230 5 1 - - - - - 1.000 predicted gene 14388 [Source:MGI Symbol;Acc:MGI:3650926]
72. Gm25076 ENSMUSG00000095477 5 1 - - - - - 1.000 predicted gene, 25076 [Source:MGI Symbol;Acc:MGI:5454853]
73. Rsc1a1 ENSMUSG00000040715 1 1 - - - - - 1.000 regulatory solute carrier protein, family 1, member 1 [Source:MGI Symbol;Acc:MGI:3526447]
74. Upk2 ENSMUSG00000041523 4 1 - - - - 1.000 - uroplakin 2 [Source:MGI Symbol;Acc:MGI:98913]
75. Gm26847 ENSMUSG00000097526 20 1 - - - - - 1.000 predicted gene, 26847 [Source:MGI Symbol;Acc:MGI:5477341]
76. Gm10650 ENSMUSG00000074237 3 1 - - - - 1.000 - predicted gene 10650 [Source:MGI Symbol;Acc:MGI:3642040]
77. Cxcl10 ENSMUSG00000034855 12 1 - - - - - 1.000 chemokine (C-X-C motif) ligand 10 [Source:MGI Symbol;Acc:MGI:1352450]
78. 4930405A21Rik ENSMUSG00000086638 4 1 - - - - 1.000 - RIKEN cDNA 4930405A21 gene [Source:MGI Symbol;Acc:MGI:1922096]
79. Pigz ENSMUSG00000045625 2 1 - - - - - 1.000 phosphatidylinositol glycan anchor biosynthesis, class Z [Source:MGI Symbol;Acc:MGI:2443822]
80. Gm11584 ENSMUSG00000084200 13 1 - - - - - 1.000 predicted gene 11584 [Source:MGI Symbol;Acc:MGI:3651394]
81. Gm7293 ENSMUSG00000111162 4 1 - - - - 1.000 - predicted gene 7293 [Source:MGI Symbol;Acc:MGI:3779717]
82. Gm10295 ENSMUSG00000070511 1 1 - - - - 1.000 - predicted gene 10295 [Source:MGI Symbol;Acc:MGI:3642770]
83. Aknad1 ENSMUSG00000049565 2 1 - - - - 1.000 - AKNA domain containing 1 [Source:MGI Symbol;Acc:MGI:3584453]
84. Gm4879 ENSMUSG00000048261 46 1 - - - - - 1.000 predicted pseudogene 4879 [Source:MGI Symbol;Acc:MGI:3648111]
85. Gm16087 ENSMUSG00000086319 1 1 - - - - - 1.000 predicted gene 16087 [Source:MGI Symbol;Acc:MGI:3801921]
86. Olfr495 ENSMUSG00000110253 1 1 - - - - 1.000 - olfactory receptor 495 [Source:MGI Symbol;Acc:MGI:3030329]
87. Gm12023 ENSMUSG00000085806 1 1 - - - - 1.000 - predicted gene 12023 [Source:MGI Symbol;Acc:MGI:3650977]
88. Mogat1 ENSMUSG00000012187 4 1 - - - - - 1.000 monoacylglycerol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:1915643]
89. Ctcfl ENSMUSG00000070495 2 1 - - - - 1.000 - CCCTC-binding factor (zinc finger protein)-like [Source:MGI Symbol;Acc:MGI:3652571]
90. Olfr504 ENSMUSG00000060105 1 1 - - - - - 1.000 olfactory receptor 504 [Source:MGI Symbol;Acc:MGI:3030338]
91. E130208F15Rik ENSMUSG00000074210 1 1 - - - - 1.000 - RIKEN cDNA E130208F15 gene [Source:MGI Symbol;Acc:MGI:3767226]
92. Gm9432 ENSMUSG00000083199 20 1 - - - - - 1.000 predicted gene 9432 [Source:MGI Symbol;Acc:MGI:3648371]
93. Gm9929 ENSMUSG00000053925 6 1 - - - - - 1.000 predicted gene 9929 [Source:MGI Symbol;Acc:MGI:3708526]
94. Gjc3 ENSMUSG00000056966 10 1 - - - - - 1.000 gap junction protein, gamma 3 [Source:MGI Symbol;Acc:MGI:2153041]
95. Capn13 ENSMUSG00000043705 1 1 - - - - 1.000 - calpain 13 [Source:MGI Symbol;Acc:MGI:2685789]
96. Gm16301 ENSMUSG00000089643 3 1 - - - - - 1.000 predicted gene 16301 [Source:MGI Symbol;Acc:MGI:3826534]
97. Gm13715 ENSMUSG00000085025 1 1 - - - - 1.000 - predicted gene 13715 [Source:MGI Symbol;Acc:MGI:3650277]
98. Tmem253 ENSMUSG00000072571 2 1 - - - - - 1.000 transmembrane protein 253 [Source:MGI Symbol;Acc:MGI:3588246]
99. Asb10 ENSMUSG00000038204 5 1 - - - - - 1.000 ankyrin repeat and SOCS box-containing 10 [Source:MGI Symbol;Acc:MGI:2152836]
100. Gm27043 ENSMUSG00000098218 1 1 - - - - - 1.000 predicted gene, 27043 [Source:MGI Symbol;Acc:MGI:5504158]

There are 54 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA